RNA–Protein interactions for RNA: ENST00000308159.9

NUP93-201, Transcript of nucleoporin 93, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP93, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-201ENST00000308159 USP16Q9Y5T5 823 aa18.33■□□□□ 0.53
NUP93-201ENST00000308159 STRCP1A6NGW2 1772 aa18.33■□□□□ 0.52
NUP93-201ENST00000308159 CSB-PGBD3P0DP91 1061 aa18.33■□□□□ 0.52
NUP93-201ENST00000308159 CHRNA2Q15822 529 aa18.33■□□□□ 0.52
NUP93-201ENST00000308159 DDX54Q8TDD1 881 aaKnown RBP18.33■□□□□ 0.52
NUP93-201ENST00000308159 ZSWIM6Q9HCJ5 1215 aa18.33■□□□□ 0.52
NUP93-201ENST00000308159 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.33■□□□□ 0.522e-7■■□□□ 13.3
NUP93-201ENST00000308159 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.33■□□□□ 0.52
NUP93-201ENST00000308159 SYT1P21579 422 aa18.32■□□□□ 0.52
NUP93-201ENST00000308159 VPS53Q5VIR6 699 aa18.32■□□□□ 0.52
NUP93-201ENST00000308159 JARID2Q92833 1246 aaPredicted RBP18.32■□□□□ 0.52
NUP93-201ENST00000308159 BOLA2Q9H3K6 86 aa18.32■□□□□ 0.52
NUP93-201ENST00000308159 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
NUP93-201ENST00000308159 RBM8AQ9Y5S9 174 aaKnown RBP18.32■□□□□ 0.52
NUP93-201ENST00000308159 CYP27B1O15528 508 aa18.32■□□□□ 0.52
NUP93-201ENST00000308159 DTNBO60941 627 aa18.32■□□□□ 0.52
NUP93-201ENST00000308159 ZSCAN22P10073 491 aaPredicted RBP18.32■□□□□ 0.52
NUP93-201ENST00000308159 TM6SF1Q9BZW5 370 aa18.32■□□□□ 0.52
NUP93-201ENST00000308159 SMC3Q9UQE7 1217 aa18.32■□□□□ 0.52
NUP93-201ENST00000308159 ARFGEF2Q9Y6D5 1785 aa18.32■□□□□ 0.52
NUP93-201ENST00000308159 STX6O43752 255 aa18.31■□□□□ 0.52
NUP93-201ENST00000308159 ANKRD13DQ6ZTN6 518 aa18.31■□□□□ 0.52
NUP93-201ENST00000308159 CYP46A1Q9Y6A2 500 aa18.31■□□□□ 0.52
NUP93-201ENST00000308159 PKD1L3Q7Z443 1732 aa18.31■□□□□ 0.52
NUP93-201ENST00000308159 MRC1P22897 1456 aa18.31■□□□□ 0.52
NUP93-201ENST00000308159 TMEM94Q12767 1356 aa18.31■□□□□ 0.52
NUP93-201ENST00000308159 CCDC83Q8IWF9 413 aa18.31■□□□□ 0.52
NUP93-201ENST00000308159 PDLIM2Q96JY6 352 aa18.31■□□□□ 0.52
NUP93-201ENST00000308159 A0A0D9SFI3 127 aa18.3■□□□□ 0.52
NUP93-201ENST00000308159 SNRPA1P09661 255 aaKnown RBP18.3■□□□□ 0.52
NUP93-201ENST00000308159 CREB3L3Q68CJ9 461 aa18.3■□□□□ 0.52
NUP93-201ENST00000308159 MAP4K1Q92918 833 aa18.3■□□□□ 0.52
NUP93-201ENST00000308159 NAP1L5Q96NT1 182 aaPredicted RBP18.3■□□□□ 0.52
NUP93-201ENST00000308159 CNPY2Q9Y2B0 182 aa18.3■□□□□ 0.52
NUP93-201ENST00000308159 ABCC6O95255 1503 aa18.3■□□□□ 0.52
NUP93-201ENST00000308159 HIP1O00291 1037 aa18.3■□□□□ 0.52
NUP93-201ENST00000308159 TTC5Q8N0Z6 440 aa18.3■□□□□ 0.52
NUP93-201ENST00000308159 DCAF5Q96JK2 942 aa18.3■□□□□ 0.52
NUP93-201ENST00000308159 COL9A3Q14050 684 aaPredicted RBP18.29■□□□□ 0.52
NUP93-201ENST00000308159 ZSCAN30Q86W11 494 aa18.29■□□□□ 0.52
NUP93-201ENST00000308159 FSD1Q9BTV5 496 aa18.29■□□□□ 0.52
NUP93-201ENST00000308159 ZKSCAN1P17029 563 aaPredicted RBP18.29■□□□□ 0.52
NUP93-201ENST00000308159 KCNJ4P48050 445 aa18.29■□□□□ 0.52
NUP93-201ENST00000308159 TMEM87AQ8NBN3 555 aa18.29■□□□□ 0.52
NUP93-201ENST00000308159 ST3GAL1Q11201 340 aa18.29■□□□□ 0.52
NUP93-201ENST00000308159 RNF214Q8ND24 703 aa18.29■□□□□ 0.52
NUP93-201ENST00000308159 SYAP1Q96A49 352 aaPredicted RBP18.29■□□□□ 0.52
NUP93-201ENST00000308159 SNRKQ9NRH2 765 aa18.29■□□□□ 0.52
NUP93-201ENST00000308159 GJB2P29033 226 aa18.28■□□□□ 0.52
NUP93-201ENST00000308159 SLC27A2O14975 620 aa18.28■□□□□ 0.52
NUP93-201ENST00000308159 F13A1P00488 732 aa18.28■□□□□ 0.52
NUP93-201ENST00000308159 ME3Q16798 604 aa18.28■□□□□ 0.52
NUP93-201ENST00000308159 EDC3Q96F86 508 aaKnown RBP18.28■□□□□ 0.52
NUP93-201ENST00000308159 FMNL2Q96PY5 1086 aa18.28■□□□□ 0.52
NUP93-201ENST00000308159 GLI3P10071 1580 aa18.27■□□□□ 0.52
NUP93-201ENST00000308159 RFX5P48382 616 aaPredicted RBP18.27■□□□□ 0.52
NUP93-201ENST00000308159 UBE3BQ7Z3V4 1068 aa18.27■□□□□ 0.52
NUP93-201ENST00000308159 ZSCAN31Q96LW9 406 aaPredicted RBP18.27■□□□□ 0.52
NUP93-201ENST00000308159 COPRSQ9NQ92 184 aa18.27■□□□□ 0.52
NUP93-201ENST00000308159 LAMB4A4D0S4 1761 aa18.27■□□□□ 0.51
NUP93-201ENST00000308159 PTPN12Q05209 780 aaKnown RBP18.27■□□□□ 0.51
NUP93-201ENST00000308159 SH2B1Q9NRF2 756 aaPredicted RBP18.27■□□□□ 0.51
NUP93-201ENST00000308159 MED23Q9ULK4 1368 aa18.27■□□□□ 0.51
NUP93-201ENST00000308159 TNS3Q68CZ2 1445 aa18.27■□□□□ 0.51
NUP93-201ENST00000308159 ATP5J2-PTCD1G3V325 749 aa18.26■□□□□ 0.51
NUP93-201ENST00000308159 PTCD1O75127 700 aaKnown RBP18.26■□□□□ 0.51
NUP93-201ENST00000308159 NECAB1Q8N987 351 aa18.26■□□□□ 0.51
NUP93-201ENST00000308159 TSPY26PQ9H489 355 aa18.26■□□□□ 0.51
NUP93-201ENST00000308159 TAF6LQ9Y6J9 622 aa18.26■□□□□ 0.51
NUP93-201ENST00000308159 ZNF589Q86UQ0 364 aaPredicted RBP18.26■□□□□ 0.51
NUP93-201ENST00000308159 DBNLQ9UJU6 430 aaKnown RBP18.26■□□□□ 0.51
NUP93-201ENST00000308159 TPCN1Q9ULQ1 816 aa18.26■□□□□ 0.51
NUP93-201ENST00000308159 TFCP2Q12800 502 aa18.25■□□□□ 0.51
NUP93-201ENST00000308159 DCCP43146 1447 aa18.25■□□□□ 0.51
NUP93-201ENST00000308159 CABP4P57796 275 aa18.25■□□□□ 0.51
NUP93-201ENST00000308159 TPRNQ4KMQ1 711 aa18.25■□□□□ 0.51
NUP93-201ENST00000308159 MTMR6Q9Y217 621 aa18.25■□□□□ 0.51
NUP93-201ENST00000308159 RABL6Q3YEC7 729 aaPredicted RBP18.24■□□□□ 0.51
NUP93-201ENST00000308159 HS1BP3Q53T59 392 aa18.24■□□□□ 0.51
NUP93-201ENST00000308159 TNNI3KQ59H18 835 aa18.24■□□□□ 0.51
NUP93-201ENST00000308159 FPGT-TNNI3KV9GXZ4 949 aa18.24■□□□□ 0.51
NUP93-201ENST00000308159 A0A087WZG4 1122 aa18.23■□□□□ 0.51
NUP93-201ENST00000308159 FIBPO43427 364 aa18.23■□□□□ 0.51
NUP93-201ENST00000308159 PHF14O94880 888 aa18.23■□□□□ 0.51
NUP93-201ENST00000308159 TCEANC2Q96MN5 208 aa18.23■□□□□ 0.51
NUP93-201ENST00000308159 NDUFB9Q9Y6M9 179 aa18.23■□□□□ 0.51
NUP93-201ENST00000308159 JCADQ9P266 1359 aa18.23■□□□□ 0.51
NUP93-201ENST00000308159 MSNP26038 577 aaKnown RBP18.23■□□□□ 0.51
NUP93-201ENST00000308159 ATP6V1DQ9Y5K8 247 aa18.23■□□□□ 0.51
NUP93-201ENST00000308159 PARP4Q9UKK3 1724 aaKnown RBP18.23■□□□□ 0.51
NUP93-201ENST00000308159 ATP5JP18859 108 aa18.22■□□□□ 0.51
NUP93-201ENST00000308159 PSMA5P28066 241 aa18.22■□□□□ 0.51
NUP93-201ENST00000308159 PLEKHG2Q9H7P9 1386 aa18.22■□□□□ 0.51
NUP93-201ENST00000308159 SPATA31A3Q5VYP0 1347 aa18.22■□□□□ 0.51
NUP93-201ENST00000308159 CASP7P55210 303 aa18.22■□□□□ 0.51
NUP93-201ENST00000308159 UBE2HP62256 183 aa18.22■□□□□ 0.51
NUP93-201ENST00000308159 DNM1Q05193 864 aaKnown RBP18.22■□□□□ 0.51
NUP93-201ENST00000308159 RNF20Q5VTR2 975 aa18.22■□□□□ 0.51
NUP93-201ENST00000308159 COL15A1P39059 1388 aa18.22■□□□□ 0.51
NUP93-201ENST00000308159 BLOC1S2Q6QNY1 142 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms