RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 ALDH1L2Q3SY69 923 aa14.02□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 NLRP10Q86W26 655 aa14.02□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 NUTM1Q86Y26 1132 aa14.02□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 PI4KAP1Q8N8J0 262 aa14.02□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 METTL22Q9BUU2 404 aaPredicted RBP14.02□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 SMC4Q9NTJ3 1288 aa14.02□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 RIC1Q4ADV7 1423 aa14.01□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 ABCC12Q96J65 1359 aa14.01□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 A0A0G2JLW4 131 aa14.01□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 ATP5J2-PTCD1G3V325 749 aa14.01□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 DPEP1P16444 411 aa14.01□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 C2CD5Q86YS7 1000 aa14.01□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 ISCA1Q9BUE6 129 aa14.01□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 BCL2L13Q9BXK5 485 aa14.01□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 TRMT112Q9UI30 125 aaKnown RBP14.01□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 WWC3Q9ULE0 1092 aa14.01□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 SH3TC1Q8TE82 1336 aa14□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 CHRNA5P30532 468 aa14□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 ERFEQ4G0M1 354 aa14□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 DNAAF4Q8WXU2 420 aa14□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 SSH1Q8WYL5 1049 aa14□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 PIM2Q9P1W9 311 aa14□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 PTPRCP08575 1304 aa13.99□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 MRPL50Q8N5N7 158 aaKnown RBP13.99□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 CCDC191Q8NCU4 936 aa13.99□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 ZNF622Q969S3 477 aaKnown RBP eCLIP13.99□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 CWC25Q9NXE8 425 aaPredicted RBP13.99□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 BCS1LQ9Y276 419 aa13.99□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 KIF16BQ96L93 1317 aa13.98□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 HSP90B1P14625 803 aaKnown RBP13.98□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 TRIM28Q13263 835 aaKnown RBP13.98□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 MASTLQ96GX5 879 aa13.98□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 YTHDC1Q96MU7 727 aaKnown RBP13.98□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 SLX4Q8IY92 1834 aa13.97□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 SRCAPQ6ZRS2 3230 aa13.97□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 GRIN3BO60391 1043 aa13.97□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 DALRD3Q5D0E6 543 aaKnown RBP13.97□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 ZBTB38Q8NAP3 1195 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 RPGRQ92834 1020 aaKnown RBP13.97□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 NLRP3Q96P20 1036 aa13.97□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 CCDC88AQ3V6T2 1871 aa13.96□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 F6X3S4 739 aa13.96□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 NPR1P16066 1061 aa13.96□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 RARSP54136 660 aaKnown RBP13.96□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 RTL5Q5HYW3 569 aaPredicted RBP13.96□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 STYK1Q6J9G0 422 aa13.96□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 SLC4A10Q6U841 1118 aa13.96□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 TTLL6Q8N841 843 aa13.96□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 LINS1Q8NG48 757 aa13.96□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 CNKSR1Q969H4 720 aa13.96□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 FAM89AQ96GI7 184 aa13.96□□□□□ -0.17
CSPG4P2Y-201ENST00000306853 SPEF2Q9C093 1822 aa13.95□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 NEURL1BA8MQ27 555 aa13.95□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 PCCAP05165 728 aaPredicted RBP13.95□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 IGKV5-2P06315 115 aa13.95□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 SRGNP10124 158 aa13.95□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 YBX3P16989 372 aaKnown RBP eCLIP13.95□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 KCNA3P22001 575 aa13.95□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 CWF19L2Q2TBE0 894 aaKnown RBP13.95□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 TAF1P21675 1872 aa13.95□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 IRS4O14654 1257 aaPredicted RBP13.94□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 HCLS1P14317 486 aaPredicted RBP13.94□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 FER1L6Q2WGJ9 1857 aa13.94□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 RBM17Q96I25 401 aaKnown RBP13.94□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 KLRG2A4D1S0 409 aaPredicted RBP13.93□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 ALDH1B1P30837 517 aa13.93□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 BRPF1P55201 1214 aaPredicted RBP13.93□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 CRY2Q49AN0 593 aa13.93□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 SLC10A5Q5PT55 438 aa13.93□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 API5Q9BZZ5 524 aaKnown RBP13.93□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 SRCIN1Q9C0H9 1055 aa13.93□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 NOB1Q9ULX3 412 aaKnown RBP13.93□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 SBF1O95248 1867 aa13.93□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 CDHR2Q9BYE9 1310 aa13.92□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 IPO8O15397 1037 aaKnown RBP13.92□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 ALDH1L1O75891 902 aa13.92□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 GCKRQ14397 625 aa13.92□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 BEND3Q5T5X7 828 aa13.92□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 PRPF40BQ6NWY9 871 aaKnown RBP13.92□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 UBE3BQ7Z3V4 1068 aa13.92□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 SYNE4Q8N205 404 aa13.92□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 PDE8AO60658 829 aa13.91□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 SOGA3Q5TF21 947 aa13.91□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 DDX46Q7L014 1031 aaKnown RBP13.91□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 FRAT1Q92837 279 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 C9orf78Q9NZ63 289 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 DICER1Q9UPY3 1922 aaKnown RBP13.9□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 CCDC152Q4G0S7 254 aa13.9□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 C3orf67Q6ZVT6 689 aa13.9□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 TMX4Q9H1E5 349 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 LRRC37AA6NMS7 1700 aa13.9□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 TIAM2Q8IVF5 1701 aa13.9□□□□□ -0.18
CSPG4P2Y-201ENST00000306853 ABCC4O15439 1325 aa13.9□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 GRM8O00222 908 aa13.89□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 PPEF1O14829 653 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 C21orf2O43822 256 aa13.89□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 BCAR3O75815 825 aa13.89□□□□□ -0.19
CSPG4P2Y-201ENST00000306853 HOXA10P31260 410 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms