RNA–Protein interactions for RNA: ENST00000306627.7

UBE2E1-201, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E1, Length 1,511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-201ENST00000306627 CAMTA2O94983 1202 aa24.07■■□□□ 1.44
UBE2E1-201ENST00000306627 ANKRD45Q5TZF3 282 aa24.07■■□□□ 1.44
UBE2E1-201ENST00000306627 NPM2Q86SE8 214 aaKnown RBP24.07■■□□□ 1.44
UBE2E1-201ENST00000306627 CHD1LQ86WJ1 897 aa24.07■■□□□ 1.44
UBE2E1-201ENST00000306627 LNPKQ9C0E8 428 aa24.07■■□□□ 1.44
UBE2E1-201ENST00000306627 SRGAP3O43295 1099 aa24.06■■□□□ 1.44
UBE2E1-201ENST00000306627 GPTP24298 496 aa24.05■■□□□ 1.44
UBE2E1-201ENST00000306627 AMIGO3Q86WK7 504 aa24.05■■□□□ 1.44
UBE2E1-201ENST00000306627 HDAC5Q9UQL6 1122 aa24.05■■□□□ 1.44
UBE2E1-201ENST00000306627 RTL5Q5HYW3 569 aaPredicted RBP24.05■■□□□ 1.44
UBE2E1-201ENST00000306627 EXOC6BQ9Y2D4 811 aa24.05■■□□□ 1.44
UBE2E1-201ENST00000306627 SCN7AQ01118 1682 aa24.04■■□□□ 1.44
UBE2E1-201ENST00000306627 RPS6KA4O75676 772 aa24.04■■□□□ 1.44
UBE2E1-201ENST00000306627 HSP90AB3PQ58FF7 597 aa24.04■■□□□ 1.44
UBE2E1-201ENST00000306627 NLRP10Q86W26 655 aa24.04■■□□□ 1.44
UBE2E1-201ENST00000306627 GNPATO15228 680 aa24.03■■□□□ 1.44
UBE2E1-201ENST00000306627 ZNF34Q8IZ26 560 aa24.03■■□□□ 1.44
UBE2E1-201ENST00000306627 RGPD3A6NKT7 1758 aaPredicted RBP24.03■■□□□ 1.44
UBE2E1-201ENST00000306627 RGPD4Q7Z3J3 1758 aa24.03■■□□□ 1.44
UBE2E1-201ENST00000306627 UBN2Q6ZU65 1347 aa24.02■■□□□ 1.44
UBE2E1-201ENST00000306627 APBB1O00213 710 aa24.02■■□□□ 1.44
UBE2E1-201ENST00000306627 C4AP0C0L4 1744 aa24.01■■□□□ 1.43
UBE2E1-201ENST00000306627 SMARCA5O60264 1052 aaPredicted RBP24.01■■□□□ 1.43
UBE2E1-201ENST00000306627 FOXO4P98177 505 aa24.01■■□□□ 1.43
UBE2E1-201ENST00000306627 PROM2Q8N271 834 aa24.01■■□□□ 1.43
UBE2E1-201ENST00000306627 RABL6Q3YEC7 729 aaPredicted RBP24■■□□□ 1.43
UBE2E1-201ENST00000306627 TSHZ2Q9NRE2 1034 aa24■■□□□ 1.43
UBE2E1-201ENST00000306627 UBR3Q6ZT12 1888 aa24■■□□□ 1.43
UBE2E1-201ENST00000306627 PCCAP05165 728 aaPredicted RBP24■■□□□ 1.43
UBE2E1-201ENST00000306627 SLC27A3Q5K4L6 730 aa24■■□□□ 1.43
UBE2E1-201ENST00000306627 SYNE4Q8N205 404 aa23.99■■□□□ 1.43
UBE2E1-201ENST00000306627 FAM89AQ96GI7 184 aa23.99■■□□□ 1.43
UBE2E1-201ENST00000306627 PA2G4Q9UQ80 394 aaKnown RBP23.99■■□□□ 1.43
UBE2E1-201ENST00000306627 SURF6O75683 361 aaKnown RBP23.98■■□□□ 1.43
UBE2E1-201ENST00000306627 TXNRD1Q16881 649 aa23.98■■□□□ 1.43
UBE2E1-201ENST00000306627 ZBTB38Q8NAP3 1195 aaPredicted RBP23.98■■□□□ 1.43
UBE2E1-201ENST00000306627 RTCBQ9Y3I0 505 aaKnown RBP23.98■■□□□ 1.43
UBE2E1-201ENST00000306627 C16orf71Q8IYS4 520 aaPredicted RBP23.97■■□□□ 1.43
UBE2E1-201ENST00000306627 BCL2L12Q9HB09 334 aa23.97■■□□□ 1.43
UBE2E1-201ENST00000306627 PLSCR1O15162 318 aa23.96■■□□□ 1.43
UBE2E1-201ENST00000306627 AK7Q96M32 723 aa23.96■■□□□ 1.43
UBE2E1-201ENST00000306627 SRP68Q9UHB9 627 aaKnown RBP23.96■■□□□ 1.43
UBE2E1-201ENST00000306627 NOP58Q9Y2X3 529 aaKnown RBP23.96■■□□□ 1.43
UBE2E1-201ENST00000306627 RFX5P48382 616 aaPredicted RBP23.95■■□□□ 1.43
UBE2E1-201ENST00000306627 LMBR1LQ6UX01 489 aa23.95■■□□□ 1.43
UBE2E1-201ENST00000306627 OTUD7AQ8TE49 926 aaPredicted RBP23.95■■□□□ 1.43
UBE2E1-201ENST00000306627 ARHGEF1Q92888 912 aaKnown RBP23.95■■□□□ 1.43
UBE2E1-201ENST00000306627 NARFQ9UHQ1 456 aa23.95■■□□□ 1.43
UBE2E1-201ENST00000306627 SUSD4Q5VX71 490 aa23.94■■□□□ 1.42
UBE2E1-201ENST00000306627 KLHDC4Q8TBB5 520 aa23.94■■□□□ 1.42
UBE2E1-201ENST00000306627 LRRCC1Q9C099 1032 aa23.94■■□□□ 1.42
UBE2E1-201ENST00000306627 BCL11AQ9H165 835 aa23.94■■□□□ 1.42
UBE2E1-201ENST00000306627 CDHR2Q9BYE9 1310 aa23.94■■□□□ 1.42
UBE2E1-201ENST00000306627 CLEC4GQ6UXB4 293 aa23.94■■□□□ 1.42
UBE2E1-201ENST00000306627 TRMT112Q9UI30 125 aaKnown RBP23.94■■□□□ 1.42
UBE2E1-201ENST00000306627 NIP7Q9Y221 180 aaKnown RBP eCLIP23.94■■□□□ 1.42
UBE2E1-201ENST00000306627 ZNF652Q9Y2D9 606 aa23.94■■□□□ 1.42
UBE2E1-201ENST00000306627 MYH3P11055 1940 aa23.93■■□□□ 1.42
UBE2E1-201ENST00000306627 PHF14O94880 888 aa23.93■■□□□ 1.42
UBE2E1-201ENST00000306627 USPL1Q5W0Q7 1092 aa23.93■■□□□ 1.42
UBE2E1-201ENST00000306627 PLA2G12BQ9BX93 195 aa23.93■■□□□ 1.42
UBE2E1-201ENST00000306627 RAB11FIP3O75154 756 aa23.92■■□□□ 1.42
UBE2E1-201ENST00000306627 PLEKHM2Q8IWE5 1019 aa23.92■■□□□ 1.42
UBE2E1-201ENST00000306627 RGL2O15211 777 aa23.91■■□□□ 1.42
UBE2E1-201ENST00000306627 PTPN12Q05209 780 aaKnown RBP23.91■■□□□ 1.42
UBE2E1-201ENST00000306627 PARP10Q53GL7 1025 aa23.91■■□□□ 1.42
UBE2E1-201ENST00000306627 RHPN1Q8TCX5 695 aa23.91■■□□□ 1.42
UBE2E1-201ENST00000306627 ZBTB47Q9UFB7 747 aaPredicted RBP23.91■■□□□ 1.42
UBE2E1-201ENST00000306627 DDX60Q8IY21 1712 aaKnown RBP23.91■■□□□ 1.42
UBE2E1-201ENST00000306627 FAM177BA6PVY3 158 aa23.9■■□□□ 1.42
UBE2E1-201ENST00000306627 COL24A1Q17RW2 1714 aa23.9■■□□□ 1.42
UBE2E1-201ENST00000306627 IRS4O14654 1257 aaPredicted RBP23.89■■□□□ 1.42
UBE2E1-201ENST00000306627 NTSR2O95665 410 aa23.89■■□□□ 1.42
UBE2E1-201ENST00000306627 TRAPPC3LQ5T215 181 aa23.89■■□□□ 1.42
UBE2E1-201ENST00000306627 TBC1D9BQ66K14 1250 aa23.89■■□□□ 1.42
UBE2E1-201ENST00000306627 IL1RAPL2Q9NP60 686 aa23.89■■□□□ 1.42
UBE2E1-201ENST00000306627 COPRSQ9NQ92 184 aa23.89■■□□□ 1.42
UBE2E1-201ENST00000306627 USP42Q9H9J4 1324 aaKnown RBP23.89■■□□□ 1.42
UBE2E1-201ENST00000306627 LAMB2P55268 1798 aa23.89■■□□□ 1.41
UBE2E1-201ENST00000306627 TUBGCP6Q96RT7 1819 aa23.89■■□□□ 1.41
UBE2E1-201ENST00000306627 ZPR1O75312 459 aa23.89■■□□□ 1.41
UBE2E1-201ENST00000306627 HSP90AB4PQ58FF6 505 aa23.89■■□□□ 1.41
UBE2E1-201ENST00000306627 UTP14AQ9BVJ6 771 aaKnown RBP23.89■■□□□ 1.41
UBE2E1-201ENST00000306627 SIL1Q9H173 461 aa23.89■■□□□ 1.41
UBE2E1-201ENST00000306627 CHMP3Q9Y3E7 222 aa23.89■■□□□ 1.41
UBE2E1-201ENST00000306627 SALL3Q9BXA9 1300 aa23.89■■□□□ 1.41
UBE2E1-201ENST00000306627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.88■■□□□ 1.41
UBE2E1-201ENST00000306627 CSF1RP07333 972 aa23.88■■□□□ 1.41
UBE2E1-201ENST00000306627 C8orf34Q49A92 452 aa23.88■■□□□ 1.41
UBE2E1-201ENST00000306627 KIF1BPQ96EK5 621 aa23.88■■□□□ 1.41
UBE2E1-201ENST00000306627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.88■■□□□ 1.41
UBE2E1-201ENST00000306627 SASH1O94885 1247 aa23.87■■□□□ 1.41
UBE2E1-201ENST00000306627 ADRA2BP18089 450 aa23.87■■□□□ 1.41
UBE2E1-201ENST00000306627 RFC4P35249 363 aa23.87■■□□□ 1.41
UBE2E1-201ENST00000306627 OS9Q13438 667 aaPredicted RBP23.87■■□□□ 1.41
UBE2E1-201ENST00000306627 ZNF827Q17R98 1081 aa23.87■■□□□ 1.41
UBE2E1-201ENST00000306627 BACH2Q9BYV9 841 aa23.87■■□□□ 1.41
UBE2E1-201ENST00000306627 SH3TC1Q8TE82 1336 aa23.86■■□□□ 1.41
UBE2E1-201ENST00000306627 BICDL1Q6ZP65 573 aa23.86■■□□□ 1.41
UBE2E1-201ENST00000306627 SSFA2P28290 1259 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms