RNA–Protein interactions for RNA: ENST00000306006.10

ZNF239-201, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF239, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-201ENST00000306006 IFIT2P09913 472 aaKnown RBP11.6□□□□□ -0.55
ZNF239-201ENST00000306006 KIF6Q6ZMV9 814 aa11.6□□□□□ -0.55
ZNF239-201ENST00000306006 ESYT1Q9BSJ8 1104 aa11.6□□□□□ -0.55
ZNF239-201ENST00000306006 ZBTB1Q9Y2K1 713 aa11.6□□□□□ -0.55
ZNF239-201ENST00000306006 FAM98CQ17RN3 349 aaKnown RBP11.6□□□□□ -0.55
ZNF239-201ENST00000306006 SNX21Q969T3 373 aa11.6□□□□□ -0.55
ZNF239-201ENST00000306006 ARXQ96QS3 562 aa11.6□□□□□ -0.55
ZNF239-201ENST00000306006 ECHDC1Q9NTX5 307 aa11.6□□□□□ -0.55
ZNF239-201ENST00000306006 MAP3K15Q6ZN16 1313 aa11.59□□□□□ -0.55
ZNF239-201ENST00000306006 GLRX3O76003 335 aaKnown RBP11.59□□□□□ -0.55
ZNF239-201ENST00000306006 VPS72Q15906 364 aa11.59□□□□□ -0.55
ZNF239-201ENST00000306006 CCDC8Q9H0W5 538 aaPredicted RBP11.59□□□□□ -0.55
ZNF239-201ENST00000306006 SLKQ9H2G2 1235 aaPredicted RBP11.59□□□□□ -0.55
ZNF239-201ENST00000306006 TRIM28Q13263 835 aaKnown RBP11.59□□□□□ -0.55
ZNF239-201ENST00000306006 HLFQ16534 295 aa11.59□□□□□ -0.55
ZNF239-201ENST00000306006 HSCBQ8IWL3 235 aa11.59□□□□□ -0.55
ZNF239-201ENST00000306006 TLR7Q9NYK1 1049 aaKnown RBP11.59□□□□□ -0.55
ZNF239-201ENST00000306006 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
ZNF239-201ENST00000306006 SPRYD3Q8NCJ5 442 aa11.58□□□□□ -0.56
ZNF239-201ENST00000306006 ANTXR1Q9H6X2 564 aa11.58□□□□□ -0.56
ZNF239-201ENST00000306006 CHMP3Q9Y3E7 222 aa11.58□□□□□ -0.56
ZNF239-201ENST00000306006 AK9Q5TCS8 1911 aa11.58□□□□□ -0.56
ZNF239-201ENST00000306006 CD2BP2O95400 341 aaKnown RBP11.57□□□□□ -0.56
ZNF239-201ENST00000306006 CNTROBQ8N137 903 aa11.57□□□□□ -0.56
ZNF239-201ENST00000306006 FNBP4Q8N3X1 1017 aaPredicted RBP11.57□□□□□ -0.56
ZNF239-201ENST00000306006 GPATCH3Q96I76 525 aa11.57□□□□□ -0.56
ZNF239-201ENST00000306006 KCNQ2O43526 872 aa11.57□□□□□ -0.56
ZNF239-201ENST00000306006 TFCP2Q12800 502 aa11.57□□□□□ -0.56
ZNF239-201ENST00000306006 IL25Q9H293 177 aa11.57□□□□□ -0.56
ZNF239-201ENST00000306006 ATP6V1AP38606 617 aa11.56□□□□□ -0.56
ZNF239-201ENST00000306006 IL6STP40189 918 aaPredicted RBP11.56□□□□□ -0.56
ZNF239-201ENST00000306006 LOC102724428A0A0B4J2F2 783 aa11.56□□□□□ -0.56
ZNF239-201ENST00000306006 PCCAP05165 728 aaPredicted RBP11.56□□□□□ -0.56
ZNF239-201ENST00000306006 SIK1P57059 783 aa11.56□□□□□ -0.56
ZNF239-201ENST00000306006 INTS5Q6P9B9 1019 aaKnown RBP11.56□□□□□ -0.56
ZNF239-201ENST00000306006 CERKQ8TCT0 537 aa11.56□□□□□ -0.56
ZNF239-201ENST00000306006 FAM89AQ96GI7 184 aa11.56□□□□□ -0.56
ZNF239-201ENST00000306006 SPATA31A6Q5VVP1 1343 aa11.56□□□□□ -0.56
ZNF239-201ENST00000306006 GPTP24298 496 aa11.55□□□□□ -0.56
ZNF239-201ENST00000306006 ITPK1Q13572 414 aa11.55□□□□□ -0.56
ZNF239-201ENST00000306006 RABEP1Q15276 862 aa11.55□□□□□ -0.56
ZNF239-201ENST00000306006 TNNI3KQ59H18 835 aa11.55□□□□□ -0.56
ZNF239-201ENST00000306006 TBC1D2BQ9UPU7 963 aa11.55□□□□□ -0.56
ZNF239-201ENST00000306006 FPGT-TNNI3KV9GXZ4 949 aa11.55□□□□□ -0.56
ZNF239-201ENST00000306006 PALLDQ8WX93 1383 aa11.55□□□□□ -0.56
ZNF239-201ENST00000306006 CRKLP46109 303 aaKnown RBP11.55□□□□□ -0.56
ZNF239-201ENST00000306006 ATG9AQ7Z3C6 839 aa11.55□□□□□ -0.56
ZNF239-201ENST00000306006 NLRP10Q86W26 655 aa11.55□□□□□ -0.56
ZNF239-201ENST00000306006 DZIP3Q86Y13 1208 aaKnown RBP11.55□□□□□ -0.56
ZNF239-201ENST00000306006 ZBTB38Q8NAP3 1195 aaPredicted RBP11.55□□□□□ -0.56
ZNF239-201ENST00000306006 ANO2Q9NQ90 1003 aa11.55□□□□□ -0.56
ZNF239-201ENST00000306006 CCDC87Q9NVE4 849 aa11.55□□□□□ -0.56
ZNF239-201ENST00000306006 USP21Q9UK80 565 aa11.55□□□□□ -0.56
ZNF239-201ENST00000306006 EIF5P55010 431 aaKnown RBP11.54□□□□□ -0.56
ZNF239-201ENST00000306006 NFKBIBQ15653 356 aa11.54□□□□□ -0.56
ZNF239-201ENST00000306006 HSP90AB3PQ58FF7 597 aa11.54□□□□□ -0.56
ZNF239-201ENST00000306006 SYNE4Q8N205 404 aa11.54□□□□□ -0.56
ZNF239-201ENST00000306006 ZNF594Q96JF6 807 aaPredicted RBP11.54□□□□□ -0.56
ZNF239-201ENST00000306006 DBNLQ9UJU6 430 aaKnown RBP11.54□□□□□ -0.56
ZNF239-201ENST00000306006 ERVV-1B6SEH8 477 aa11.54□□□□□ -0.56
ZNF239-201ENST00000306006 SGSM2O43147 1006 aa11.54□□□□□ -0.56
ZNF239-201ENST00000306006 PLA2G12BQ9BX93 195 aa11.54□□□□□ -0.56
ZNF239-201ENST00000306006 NUP98P52948 1817 aa11.53□□□□□ -0.56
ZNF239-201ENST00000306006 EVI5LQ96CN4 794 aa11.53□□□□□ -0.56
ZNF239-201ENST00000306006 BOLA2Q9H3K6 86 aa11.53□□□□□ -0.56
ZNF239-201ENST00000306006 ANKRD36CQ5JPF3 1778 aa11.53□□□□□ -0.56
ZNF239-201ENST00000306006 K7ELQ4 463 aaPredicted RBP11.53□□□□□ -0.56
ZNF239-201ENST00000306006 LRRC24Q50LG9 513 aa11.53□□□□□ -0.56
ZNF239-201ENST00000306006 CWC27Q6UX04 472 aaKnown RBP11.53□□□□□ -0.56
ZNF239-201ENST00000306006 SMARCC1Q92922 1105 aaPredicted RBP11.53□□□□□ -0.56
ZNF239-201ENST00000306006 EYA2O00167 538 aa11.52□□□□□ -0.57
ZNF239-201ENST00000306006 CSF1RP07333 972 aa11.52□□□□□ -0.57
ZNF239-201ENST00000306006 HSPA1LP34931 641 aa11.52□□□□□ -0.57
ZNF239-201ENST00000306006 CCDC85AQ96PX6 553 aaPredicted RBP11.52□□□□□ -0.57
ZNF239-201ENST00000306006 DBNDD2Q9BQY9 259 aa11.52□□□□□ -0.57
ZNF239-201ENST00000306006 PUS3Q9BZE2 481 aaKnown RBP11.52□□□□□ -0.57
ZNF239-201ENST00000306006 PALD1Q9ULE6 856 aa11.52□□□□□ -0.57
ZNF239-201ENST00000306006 CICQ96RK0 1608 aaPredicted RBP11.52□□□□□ -0.57
ZNF239-201ENST00000306006 CDHR2Q9BYE9 1310 aa11.52□□□□□ -0.57
ZNF239-201ENST00000306006 MYH14Q7Z406 1995 aaKnown RBP11.52□□□□□ -0.57
ZNF239-201ENST00000306006 RREB1Q92766 1687 aa11.52□□□□□ -0.57
ZNF239-201ENST00000306006 IL15P40933 162 aaPredicted RBP11.52□□□□□ -0.57
ZNF239-201ENST00000306006 CCDC57Q2TAC2 916 aa11.52□□□□□ -0.57
ZNF239-201ENST00000306006 PTF1AQ7RTS3 328 aa11.52□□□□□ -0.57
ZNF239-201ENST00000306006 ZNF34Q8IZ26 560 aa11.52□□□□□ -0.57
ZNF239-201ENST00000306006 DIAPH3Q9NSV4 1193 aa11.52□□□□□ -0.57
ZNF239-201ENST00000306006 UBN2Q6ZU65 1347 aa11.51□□□□□ -0.57
ZNF239-201ENST00000306006 CIAO1O76071 339 aa11.51□□□□□ -0.57
ZNF239-201ENST00000306006 ATP5JP18859 108 aa11.51□□□□□ -0.57
ZNF239-201ENST00000306006 MCCP23508 829 aa11.51□□□□□ -0.57
ZNF239-201ENST00000306006 TRMT112Q9UI30 125 aaKnown RBP11.51□□□□□ -0.57
ZNF239-201ENST00000306006 EPB41L2O43491 1005 aaKnown RBP11.5□□□□□ -0.57
ZNF239-201ENST00000306006 AEBP2Q6ZN18 517 aaPredicted RBP11.5□□□□□ -0.57
ZNF239-201ENST00000306006 LSG1Q9H089 658 aaKnown RBP11.5□□□□□ -0.57
ZNF239-201ENST00000306006 FRAT2O75474 233 aaPredicted RBP11.5□□□□□ -0.57
ZNF239-201ENST00000306006 DDIT3P35638 169 aa11.5□□□□□ -0.57
ZNF239-201ENST00000306006 MEX3CQ5U5Q3 659 aaKnown RBP11.5□□□□□ -0.57
ZNF239-201ENST00000306006 TTLL11Q8NHH1 800 aa11.5□□□□□ -0.57
ZNF239-201ENST00000306006 RUFY2Q8WXA3 655 aa11.5□□□□□ -0.57
ZNF239-201ENST00000306006 RAD50Q92878 1312 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms