RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 KIF6Q6ZMV9 814 aa23.61■■□□□ 1.37
HOXC4-201ENST00000303406 BARGINQ6ZT62 677 aa23.61■■□□□ 1.37
HOXC4-201ENST00000303406 ANO2Q9NQ90 1003 aa23.61■■□□□ 1.37
HOXC4-201ENST00000303406 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.61■■□□□ 1.37
HOXC4-201ENST00000303406 SPATA31A5Q5VU36 1347 aa23.6■■□□□ 1.37
HOXC4-201ENST00000303406 SPATA31A7Q8IWB4 1347 aa23.6■■□□□ 1.37
HOXC4-201ENST00000303406 MCM2P49736 904 aa23.6■■□□□ 1.37
HOXC4-201ENST00000303406 ZBTB3Q9H5J0 574 aa23.6■■□□□ 1.37
HOXC4-201ENST00000303406 SPRYD3Q8NCJ5 442 aa23.59■■□□□ 1.37
HOXC4-201ENST00000303406 RAD50Q92878 1312 aa23.59■■□□□ 1.37
HOXC4-201ENST00000303406 LMBR1LQ6UX01 489 aa23.59■■□□□ 1.37
HOXC4-201ENST00000303406 SIL1Q9H173 461 aa23.59■■□□□ 1.37
HOXC4-201ENST00000303406 GPR108Q9NPR9 543 aa23.59■■□□□ 1.37
HOXC4-201ENST00000303406 MAP3K15Q6ZN16 1313 aa23.58■■□□□ 1.37
HOXC4-201ENST00000303406 CYP19A1P11511 503 aaPredicted RBP23.58■■□□□ 1.36
HOXC4-201ENST00000303406 HSPA4P34932 840 aa23.58■■□□□ 1.36
HOXC4-201ENST00000303406 DDB1Q16531 1140 aa23.58■■□□□ 1.36
HOXC4-201ENST00000303406 HSP90AB3PQ58FF7 597 aa23.58■■□□□ 1.36
HOXC4-201ENST00000303406 PLA2G12BQ9BX93 195 aa23.58■■□□□ 1.36
HOXC4-201ENST00000303406 ANKRD36CQ5JPF3 1778 aa23.57■■□□□ 1.36
HOXC4-201ENST00000303406 ADAMTS2O95450 1211 aa23.57■■□□□ 1.36
HOXC4-201ENST00000303406 MAP4K4O95819 1239 aaPredicted RBP23.57■■□□□ 1.36
HOXC4-201ENST00000303406 TNNI3KQ59H18 835 aa23.57■■□□□ 1.36
HOXC4-201ENST00000303406 FBXO3Q9UK99 471 aa23.57■■□□□ 1.36
HOXC4-201ENST00000303406 FPGT-TNNI3KV9GXZ4 949 aa23.57■■□□□ 1.36
HOXC4-201ENST00000303406 RFX7Q2KHR2 1363 aa23.57■■□□□ 1.36
HOXC4-201ENST00000303406 PCCAP05165 728 aaPredicted RBP23.56■■□□□ 1.36
HOXC4-201ENST00000303406 HSP90AA1P07900 732 aaKnown RBP23.56■■□□□ 1.36
HOXC4-201ENST00000303406 KLHDC4Q8TBB5 520 aa23.56■■□□□ 1.36
HOXC4-201ENST00000303406 JARID2Q92833 1246 aaPredicted RBP23.56■■□□□ 1.36
HOXC4-201ENST00000303406 CCDC8Q9H0W5 538 aaPredicted RBP23.56■■□□□ 1.36
HOXC4-201ENST00000303406 SNRKQ9NRH2 765 aa23.56■■□□□ 1.36
HOXC4-201ENST00000303406 DIAPH3Q9NSV4 1193 aa23.56■■□□□ 1.36
HOXC4-201ENST00000303406 CIAO1O76071 339 aa23.55■■□□□ 1.36
HOXC4-201ENST00000303406 DEKP35659 375 aaKnown RBP23.55■■□□□ 1.36
HOXC4-201ENST00000303406 GIGYF2Q6Y7W6 1299 aaKnown RBP23.55■■□□□ 1.36
HOXC4-201ENST00000303406 LSG1Q9H089 658 aaKnown RBP23.55■■□□□ 1.36
HOXC4-201ENST00000303406 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.55■■□□□ 1.36
HOXC4-201ENST00000303406 RREB1Q92766 1687 aa23.55■■□□□ 1.36
HOXC4-201ENST00000303406 ATP5JP18859 108 aa23.54■■□□□ 1.36
HOXC4-201ENST00000303406 TICAM2Q86XR7 235 aa23.54■■□□□ 1.36
HOXC4-201ENST00000303406 SLC4A9Q96Q91 983 aa23.54■■□□□ 1.36
HOXC4-201ENST00000303406 CDHR2Q9BYE9 1310 aa23.54■■□□□ 1.36
HOXC4-201ENST00000303406 IL6STP40189 918 aaPredicted RBP23.54■■□□□ 1.36
HOXC4-201ENST00000303406 IL15P40933 162 aaPredicted RBP23.54■■□□□ 1.36
HOXC4-201ENST00000303406 TFCP2Q12800 502 aa23.54■■□□□ 1.36
HOXC4-201ENST00000303406 RAB3GAP1Q15042 981 aa23.54■■□□□ 1.36
HOXC4-201ENST00000303406 KIAA1211Q6ZU35 1233 aa23.54■■□□□ 1.36
HOXC4-201ENST00000303406 IL25Q9H293 177 aa23.54■■□□□ 1.36
HOXC4-201ENST00000303406 ERVV-1B6SEH8 477 aa23.53■■□□□ 1.36
HOXC4-201ENST00000303406 PRIM1P49642 420 aaKnown RBP23.53■■□□□ 1.36
HOXC4-201ENST00000303406 CWC22Q9HCG8 908 aaKnown RBP23.53■■□□□ 1.36
HOXC4-201ENST00000303406 TLR7Q9NYK1 1049 aaKnown RBP23.53■■□□□ 1.36
HOXC4-201ENST00000303406 ZBTB38Q8NAP3 1195 aaPredicted RBP23.52■■□□□ 1.36
HOXC4-201ENST00000303406 MCM4P33991 863 aa23.51■■□□□ 1.35
HOXC4-201ENST00000303406 DBNLQ9UJU6 430 aaKnown RBP23.51■■□□□ 1.35
HOXC4-201ENST00000303406 PALD1Q9ULE6 856 aa23.51■■□□□ 1.35
HOXC4-201ENST00000303406 ZNF831Q5JPB2 1677 aa23.5■■□□□ 1.35
HOXC4-201ENST00000303406 EYA2O00167 538 aa23.5■■□□□ 1.35
HOXC4-201ENST00000303406 CWC27Q6UX04 472 aaKnown RBP23.5■■□□□ 1.35
HOXC4-201ENST00000303406 ATG9AQ7Z3C6 839 aa23.5■■□□□ 1.35
HOXC4-201ENST00000303406 KCNB2Q92953 911 aa23.49■■□□□ 1.35
HOXC4-201ENST00000303406 JCADQ9P266 1359 aa23.49■■□□□ 1.35
HOXC4-201ENST00000303406 CSF1RP07333 972 aa23.49■■□□□ 1.35
HOXC4-201ENST00000303406 NEK4P51957 841 aa23.49■■□□□ 1.35
HOXC4-201ENST00000303406 MARCH10Q8NA82 808 aaPredicted RBP23.49■■□□□ 1.35
HOXC4-201ENST00000303406 SYTL4Q96C24 671 aaPredicted RBP23.49■■□□□ 1.35
HOXC4-201ENST00000303406 ZBTB1Q9Y2K1 713 aa23.49■■□□□ 1.35
HOXC4-201ENST00000303406 CHMP3Q9Y3E7 222 aa23.49■■□□□ 1.35
HOXC4-201ENST00000303406 NUTM2BA6NNL0 878 aaPredicted RBP23.48■■□□□ 1.35
HOXC4-201ENST00000303406 DDX11L8A8MPP1 907 aa23.48■■□□□ 1.35
HOXC4-201ENST00000303406 NUTM2EB1AL46 878 aaPredicted RBP23.48■■□□□ 1.35
HOXC4-201ENST00000303406 NUTM2AQ8IVF1 878 aaPredicted RBP23.48■■□□□ 1.35
HOXC4-201ENST00000303406 BOLA2Q9H3K6 86 aa23.48■■□□□ 1.35
HOXC4-201ENST00000303406 PTMSP20962 102 aa23.47■■□□□ 1.35
HOXC4-201ENST00000303406 PIP4K2BP78356 416 aa23.47■■□□□ 1.35
HOXC4-201ENST00000303406 NUCB2P80303 420 aa23.47■■□□□ 1.35
HOXC4-201ENST00000303406 CLEC17AQ6ZS10 378 aa23.47■■□□□ 1.35
HOXC4-201ENST00000303406 NLRP10Q86W26 655 aa23.47■■□□□ 1.35
HOXC4-201ENST00000303406 ZNF609O15014 1411 aa23.47■■□□□ 1.35
HOXC4-201ENST00000303406 NUP98P52948 1817 aa23.46■■□□□ 1.35
HOXC4-201ENST00000303406 CUL4AQ13619 759 aa23.46■■□□□ 1.35
HOXC4-201ENST00000303406 GSE1Q14687 1217 aa23.46■■□□□ 1.35
HOXC4-201ENST00000303406 SMARCC1Q92922 1105 aaPredicted RBP23.46■■□□□ 1.35
HOXC4-201ENST00000303406 GBP4Q96PP9 640 aa23.46■■□□□ 1.35
HOXC4-201ENST00000303406 HAUS7Q99871 368 aa23.46■■□□□ 1.35
HOXC4-201ENST00000303406 ZNF330Q9Y3S2 320 aaPredicted RBP23.46■■□□□ 1.35
HOXC4-201ENST00000303406 SPEF2Q9C093 1822 aa23.46■■□□□ 1.35
HOXC4-201ENST00000303406 VPS72Q15906 364 aa23.45■■□□□ 1.34
HOXC4-201ENST00000303406 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.45■■□□□ 1.34
HOXC4-201ENST00000303406 TNPO1Q92973 898 aaKnown RBP23.45■■□□□ 1.34
HOXC4-201ENST00000303406 FSD1Q9BTV5 496 aa23.45■■□□□ 1.34
HOXC4-201ENST00000303406 MED23Q9ULK4 1368 aa23.45■■□□□ 1.34
HOXC4-201ENST00000303406 SNX14Q9Y5W7 946 aa23.45■■□□□ 1.34
HOXC4-201ENST00000303406 CCDC171Q6TFL3 1326 aa23.44■■□□□ 1.34
HOXC4-201ENST00000303406 CCDC57Q2TAC2 916 aa23.44■■□□□ 1.34
HOXC4-201ENST00000303406 INTS4Q96HW7 963 aaKnown RBP23.44■■□□□ 1.34
HOXC4-201ENST00000303406 DBNDD2Q9BQY9 259 aa23.44■■□□□ 1.34
HOXC4-201ENST00000303406 EIF5P55010 431 aaKnown RBP23.43■■□□□ 1.34
HOXC4-201ENST00000303406 NMIQ13287 307 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms