RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 USP26Q9BXU7 913 aa12.96□□□□□ -0.33
CLP1-201ENST00000302731 ZBTB1Q9Y2K1 713 aa12.96□□□□□ -0.33
CLP1-201ENST00000302731 KAT6BQ8WYB5 2073 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 THSD7AQ9UPZ6 1657 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 LOC102724428A0A0B4J2F2 783 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 TRIM6-TRIM34B2RNG4 842 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 PCCAP05165 728 aaPredicted RBP12.95□□□□□ -0.34
CLP1-201ENST00000302731 CHMLP26374 656 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 SIK1P57059 783 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 FAM98CQ17RN3 349 aaKnown RBP12.95□□□□□ -0.34
CLP1-201ENST00000302731 TSHZ3Q63HK5 1081 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 LMBR1LQ6UX01 489 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 TBC1D2Q9BYX2 928 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 USP21Q9UK80 565 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 CDHR2Q9BYE9 1310 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 SLC4A3P48751 1232 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 AACSQ86V21 672 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 ZBTB38Q8NAP3 1195 aaPredicted RBP12.95□□□□□ -0.34
CLP1-201ENST00000302731 KIF2CQ99661 725 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 FBXO3Q9UK99 471 aa12.95□□□□□ -0.34
CLP1-201ENST00000302731 PALLDQ8WX93 1383 aa12.94□□□□□ -0.34
CLP1-201ENST00000302731 ANKRD36CQ5JPF3 1778 aa12.94□□□□□ -0.34
CLP1-201ENST00000302731 ATP6V1AP38606 617 aa12.94□□□□□ -0.34
CLP1-201ENST00000302731 EIF5P55010 431 aaKnown RBP12.94□□□□□ -0.34
CLP1-201ENST00000302731 RILPL2Q969X0 211 aa12.94□□□□□ -0.34
CLP1-201ENST00000302731 EAF2Q96CJ1 260 aaPredicted RBP12.94□□□□□ -0.34
CLP1-201ENST00000302731 ACSBG1Q96GR2 724 aa12.94□□□□□ -0.34
CLP1-201ENST00000302731 ESYT1Q9BSJ8 1104 aa12.94□□□□□ -0.34
CLP1-201ENST00000302731 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
CLP1-201ENST00000302731 ZNF330Q9Y3S2 320 aaPredicted RBP12.94□□□□□ -0.34
CLP1-201ENST00000302731 INTS5Q6P9B9 1019 aaKnown RBP12.93□□□□□ -0.34
CLP1-201ENST00000302731 IL27Q8NEV9 243 aa12.93□□□□□ -0.34
CLP1-201ENST00000302731 JARID2Q92833 1246 aaPredicted RBP12.93□□□□□ -0.34
CLP1-201ENST00000302731 GPR108Q9NPR9 543 aa12.93□□□□□ -0.34
CLP1-201ENST00000302731 CIAO1O76071 339 aa12.92□□□□□ -0.34
CLP1-201ENST00000302731 RABEP1Q15276 862 aa12.92□□□□□ -0.34
CLP1-201ENST00000302731 NLRP10Q86W26 655 aa12.92□□□□□ -0.34
CLP1-201ENST00000302731 DZIP3Q86Y13 1208 aaKnown RBP12.92□□□□□ -0.34
CLP1-201ENST00000302731 HSCBQ8IWL3 235 aa12.92□□□□□ -0.34
CLP1-201ENST00000302731 KLHDC4Q8TBB5 520 aa12.92□□□□□ -0.34
CLP1-201ENST00000302731 SIL1Q9H173 461 aa12.92□□□□□ -0.34
CLP1-201ENST00000302731 AK9Q5TCS8 1911 aa12.92□□□□□ -0.34
CLP1-201ENST00000302731 CSF1RP07333 972 aa12.91□□□□□ -0.34
CLP1-201ENST00000302731 IL15P40933 162 aaPredicted RBP12.91□□□□□ -0.34
CLP1-201ENST00000302731 CRKLP46109 303 aaKnown RBP12.91□□□□□ -0.34
CLP1-201ENST00000302731 HLFQ16534 295 aa12.91□□□□□ -0.34
CLP1-201ENST00000302731 EVI5LQ96CN4 794 aa12.91□□□□□ -0.34
CLP1-201ENST00000302731 NUP98P52948 1817 aa12.91□□□□□ -0.34
CLP1-201ENST00000302731 RGL2O15211 777 aa12.91□□□□□ -0.34
CLP1-201ENST00000302731 TNNI3KQ59H18 835 aa12.91□□□□□ -0.34
CLP1-201ENST00000302731 ZNF34Q8IZ26 560 aa12.91□□□□□ -0.34
CLP1-201ENST00000302731 IL17RAQ96F46 866 aa12.91□□□□□ -0.34
CLP1-201ENST00000302731 AK7Q96M32 723 aa12.91□□□□□ -0.34
CLP1-201ENST00000302731 FPGT-TNNI3KV9GXZ4 949 aa12.91□□□□□ -0.34
CLP1-201ENST00000302731 COL5A3P25940 1745 aaPredicted RBP12.9□□□□□ -0.34
CLP1-201ENST00000302731 EYA2O00167 538 aa12.9□□□□□ -0.34
CLP1-201ENST00000302731 HIP1O00291 1037 aa12.9□□□□□ -0.34
CLP1-201ENST00000302731 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.34
CLP1-201ENST00000302731 HSPA1LP34931 641 aa12.9□□□□□ -0.34
CLP1-201ENST00000302731 ANAPC15P60006 121 aa12.9□□□□□ -0.34
CLP1-201ENST00000302731 ITPK1Q13572 414 aa12.9□□□□□ -0.34
CLP1-201ENST00000302731 GJD4Q96KN9 370 aaPredicted RBP12.9□□□□□ -0.34
CLP1-201ENST00000302731 KCNQ2O43526 872 aa12.89□□□□□ -0.35
CLP1-201ENST00000302731 MCCP23508 829 aa12.89□□□□□ -0.35
CLP1-201ENST00000302731 TFCP2Q12800 502 aa12.89□□□□□ -0.35
CLP1-201ENST00000302731 CCDC57Q2TAC2 916 aa12.89□□□□□ -0.35
CLP1-201ENST00000302731 MEX3CQ5U5Q3 659 aaKnown RBP12.89□□□□□ -0.35
CLP1-201ENST00000302731 ATG9AQ7Z3C6 839 aa12.89□□□□□ -0.35
CLP1-201ENST00000302731 TICAM2Q86XR7 235 aa12.89□□□□□ -0.35
CLP1-201ENST00000302731 RUFY2Q8WXA3 655 aa12.89□□□□□ -0.35
CLP1-201ENST00000302731 CCDC8Q9H0W5 538 aaPredicted RBP12.89□□□□□ -0.35
CLP1-201ENST00000302731 CHMP3Q9Y3E7 222 aa12.89□□□□□ -0.35
CLP1-201ENST00000302731 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.89□□□□□ -0.35
CLP1-201ENST00000302731 ATRNO75882 1429 aa12.89□□□□□ -0.35
CLP1-201ENST00000302731 NHSQ6T4R5 1651 aa12.89□□□□□ -0.35
CLP1-201ENST00000302731 A0A0G2JS52 829 aa12.88□□□□□ -0.35
CLP1-201ENST00000302731 SGSM2O43147 1006 aa12.88□□□□□ -0.35
CLP1-201ENST00000302731 ATP5JP18859 108 aa12.88□□□□□ -0.35
CLP1-201ENST00000302731 PARP10Q53GL7 1025 aa12.88□□□□□ -0.35
CLP1-201ENST00000302731 RTL5Q5HYW3 569 aaPredicted RBP12.88□□□□□ -0.35
CLP1-201ENST00000302731 FAM89AQ96GI7 184 aa12.88□□□□□ -0.35
CLP1-201ENST00000302731 ARXQ96QS3 562 aa12.88□□□□□ -0.35
CLP1-201ENST00000302731 TRPC5Q9UL62 973 aaPredicted RBP12.88□□□□□ -0.35
CLP1-201ENST00000302731 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
CLP1-201ENST00000302731 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
CLP1-201ENST00000302731 DBNLQ9UJU6 430 aaKnown RBP12.88□□□□□ -0.35
CLP1-201ENST00000302731 TBC1D2BQ9UPU7 963 aa12.88□□□□□ -0.35
CLP1-201ENST00000302731 AFF2P51816 1311 aa12.87□□□□□ -0.35
CLP1-201ENST00000302731 MYH14Q7Z406 1995 aaKnown RBP12.87□□□□□ -0.35
CLP1-201ENST00000302731 RFX7Q2KHR2 1363 aa12.87□□□□□ -0.35
CLP1-201ENST00000302731 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
CLP1-201ENST00000302731 HSP90B1P14625 803 aaKnown RBP12.87□□□□□ -0.35
CLP1-201ENST00000302731 IFIT5Q13325 482 aaKnown RBP12.87□□□□□ -0.35
CLP1-201ENST00000302731 RC3H1Q5TC82 1133 aaKnown RBP12.87□□□□□ -0.35
CLP1-201ENST00000302731 DIAPH3Q9NSV4 1193 aa12.87□□□□□ -0.35
CLP1-201ENST00000302731 TLR7Q9NYK1 1049 aaKnown RBP12.87□□□□□ -0.35
CLP1-201ENST00000302731 PDE8AO60658 829 aa12.86□□□□□ -0.35
CLP1-201ENST00000302731 MAP4K4O95819 1239 aaPredicted RBP12.86□□□□□ -0.35
CLP1-201ENST00000302731 GPTP24298 496 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms