RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 MON2Q7Z3U7 1717 aa16.68■□□□□ 0.26
SDC2-201ENST00000302190 KCNQ3O43525 872 aa16.67■□□□□ 0.26
SDC2-201ENST00000302190 KIF2CQ99661 725 aa16.67■□□□□ 0.26
SDC2-201ENST00000302190 ECHDC1Q9NTX5 307 aa16.67■□□□□ 0.26
SDC2-201ENST00000302190 AKAP12Q02952 1782 aa16.67■□□□□ 0.26
SDC2-201ENST00000302190 NUP62CLQ9H1M0 184 aa16.67■□□□□ 0.26
SDC2-201ENST00000302190 CCT2P78371 535 aaKnown RBP16.67■□□□□ 0.26
SDC2-201ENST00000302190 ME1P48163 572 aa16.66■□□□□ 0.26
SDC2-201ENST00000302190 CCDC183Q5T5S1 534 aa16.66■□□□□ 0.26
SDC2-201ENST00000302190 CCAR2Q8N163 923 aaKnown RBP16.66■□□□□ 0.26
SDC2-201ENST00000302190 ADAMTS2O95450 1211 aa16.66■□□□□ 0.26
SDC2-201ENST00000302190 PIK3C2AO00443 1686 aa16.66■□□□□ 0.26
SDC2-201ENST00000302190 PNPLA6Q8IY17 1366 aa16.66■□□□□ 0.26
SDC2-201ENST00000302190 TPD52L1Q16890 204 aaPredicted RBP16.66■□□□□ 0.26
SDC2-201ENST00000302190 SYT1P21579 422 aa16.65■□□□□ 0.26
SDC2-201ENST00000302190 ANKARQ7Z5J8 1434 aa16.65■□□□□ 0.26
SDC2-201ENST00000302190 PDCP20941 246 aa16.65■□□□□ 0.26
SDC2-201ENST00000302190 ZSCAN22P10073 491 aaPredicted RBP16.65■□□□□ 0.26
SDC2-201ENST00000302190 TOPAZ1Q8N9V7 1692 aa16.65■□□□□ 0.26
SDC2-201ENST00000302190 DDX46Q7L014 1031 aaKnown RBP16.64■□□□□ 0.26
SDC2-201ENST00000302190 MTERF4Q7Z6M4 381 aaKnown RBP16.64■□□□□ 0.26
SDC2-201ENST00000302190 CBX1P83916 185 aa16.64■□□□□ 0.25
SDC2-201ENST00000302190 UBE3BQ7Z3V4 1068 aa16.64■□□□□ 0.25
SDC2-201ENST00000302190 SNRKQ9NRH2 765 aa16.64■□□□□ 0.25
SDC2-201ENST00000302190 DBF4Q9UBU7 674 aaPredicted RBP16.64■□□□□ 0.25
SDC2-201ENST00000302190 ZKSCAN5Q9Y2L8 839 aa16.64■□□□□ 0.25
SDC2-201ENST00000302190 KIF3AQ9Y496 699 aa16.64■□□□□ 0.25
SDC2-201ENST00000302190 NPHP3Q7Z494 1330 aa16.64■□□□□ 0.25
SDC2-201ENST00000302190 KAT6BQ8WYB5 2073 aa16.64■□□□□ 0.25
SDC2-201ENST00000302190 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
SDC2-201ENST00000302190 EDC3Q96F86 508 aaKnown RBP16.64■□□□□ 0.25
SDC2-201ENST00000302190 USP44Q9H0E7 712 aa16.64■□□□□ 0.25
SDC2-201ENST00000302190 ERC1Q8IUD2 1116 aa16.63■□□□□ 0.25
SDC2-201ENST00000302190 ANKRD24Q8TF21 1146 aa16.63■□□□□ 0.25
SDC2-201ENST00000302190 C16orf45Q96MC5 204 aaPredicted RBP16.63■□□□□ 0.25
SDC2-201ENST00000302190 HOMER1Q86YM7 354 aa16.63■□□□□ 0.25
SDC2-201ENST00000302190 RBM8AQ9Y5S9 174 aaKnown RBP16.63■□□□□ 0.25
SDC2-201ENST00000302190 KINO60870 393 aaKnown RBP16.63■□□□□ 0.25
SDC2-201ENST00000302190 MAP3K11Q16584 847 aa16.63■□□□□ 0.25
SDC2-201ENST00000302190 SMAP1Q8IYB5 467 aaPredicted RBP16.63■□□□□ 0.25
SDC2-201ENST00000302190 ZNF853P0CG23 659 aa16.62■□□□□ 0.25
SDC2-201ENST00000302190 IL17REQ8NFR9 667 aa16.62■□□□□ 0.25
SDC2-201ENST00000302190 PRDM11Q9NQV5 511 aa16.62■□□□□ 0.25
SDC2-201ENST00000302190 FLT4P35916 1363 aa16.62■□□□□ 0.25
SDC2-201ENST00000302190 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
SDC2-201ENST00000302190 CHST3Q7LGC8 479 aa16.62■□□□□ 0.25
SDC2-201ENST00000302190 PEAK1Q9H792 1746 aa16.62■□□□□ 0.25
SDC2-201ENST00000302190 FAM227BQ96M60 508 aa16.62■□□□□ 0.25
SDC2-201ENST00000302190 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.61■□□□□ 0.25
SDC2-201ENST00000302190 EP400Q96L91 3159 aa16.61■□□□□ 0.25
SDC2-201ENST00000302190 SPDYE4A6NLX3 237 aa16.61■□□□□ 0.25
SDC2-201ENST00000302190 ISM2Q6H9L7 571 aa16.61■□□□□ 0.25
SDC2-201ENST00000302190 SMC2O95347 1197 aa16.61■□□□□ 0.25
SDC2-201ENST00000302190 HAND2P61296 217 aa16.61■□□□□ 0.25
SDC2-201ENST00000302190 RALYLQ86SE5 291 aaKnown RBP16.61■□□□□ 0.25
SDC2-201ENST00000302190 NFXL1Q6ZNB6 911 aa16.6■□□□□ 0.25
SDC2-201ENST00000302190 FAM177A1Q8N128 213 aaPredicted RBP16.6■□□□□ 0.25
SDC2-201ENST00000302190 UBAP1LF5GYI3 381 aa16.6■□□□□ 0.25
SDC2-201ENST00000302190 TRMT1Q9NXH9 659 aaKnown RBP16.6■□□□□ 0.25
SDC2-201ENST00000302190 AATKQ6ZMQ8 1374 aa16.6■□□□□ 0.25
SDC2-201ENST00000302190 KIAA0232Q92628 1395 aa16.6■□□□□ 0.25
SDC2-201ENST00000302190 UBE2HP62256 183 aa16.6■□□□□ 0.25
SDC2-201ENST00000302190 SYNE3Q6ZMZ3 975 aa16.6■□□□□ 0.25
SDC2-201ENST00000302190 ARHGEF25Q86VW2 580 aa16.6■□□□□ 0.25
SDC2-201ENST00000302190 RASEFQ8IZ41 740 aa16.6■□□□□ 0.25
SDC2-201ENST00000302190 A0A087WZG4 1122 aa16.59■□□□□ 0.25
SDC2-201ENST00000302190 IGSF3O75054 1194 aa16.59■□□□□ 0.25
SDC2-201ENST00000302190 OFD1O75665 1012 aa16.59■□□□□ 0.25
SDC2-201ENST00000302190 LETM1O95202 739 aaPredicted RBP16.59■□□□□ 0.25
SDC2-201ENST00000302190 NMIQ13287 307 aaPredicted RBP16.59■□□□□ 0.25
SDC2-201ENST00000302190 DACT1Q9NYF0 836 aa16.59■□□□□ 0.25
SDC2-201ENST00000302190 SNX14Q9Y5W7 946 aa16.59■□□□□ 0.25
SDC2-201ENST00000302190 SBNO1A3KN83 1393 aa16.59■□□□□ 0.25
SDC2-201ENST00000302190 F13A1P00488 732 aa16.59■□□□□ 0.25
SDC2-201ENST00000302190 EVA1CP58658 441 aa16.59■□□□□ 0.25
SDC2-201ENST00000302190 BRF1Q92994 677 aa16.59■□□□□ 0.25
SDC2-201ENST00000302190 SRCAPQ6ZRS2 3230 aa16.59■□□□□ 0.25
SDC2-201ENST00000302190 ZNF771Q7L3S4 317 aaPredicted RBP16.59■□□□□ 0.25
SDC2-201ENST00000302190 COPS6Q7L5N1 327 aa16.59■□□□□ 0.25
SDC2-201ENST00000302190 IP6K1Q92551 441 aa16.59■□□□□ 0.25
SDC2-201ENST00000302190 USP31Q70CQ4 1352 aa16.59■□□□□ 0.25
SDC2-201ENST00000302190 ANKRD26Q9UPS8 1709 aa16.58■□□□□ 0.25
SDC2-201ENST00000302190 BIN1O00499 593 aa16.58■□□□□ 0.25
SDC2-201ENST00000302190 CABP4P57796 275 aa16.58■□□□□ 0.25
SDC2-201ENST00000302190 ZSCAN31Q96LW9 406 aaPredicted RBP16.58■□□□□ 0.25
SDC2-201ENST00000302190 ZBTB3Q9H5J0 574 aa16.58■□□□□ 0.25
SDC2-201ENST00000302190 NRKQ7Z2Y5 1582 aa16.58■□□□□ 0.25
SDC2-201ENST00000302190 GOLIM4O00461 696 aa16.58■□□□□ 0.24
SDC2-201ENST00000302190 ZNF445P59923 1031 aa16.58■□□□□ 0.24
SDC2-201ENST00000302190 RRP12Q5JTH9 1297 aaKnown RBP16.58■□□□□ 0.24
SDC2-201ENST00000302190 KCNH5Q8NCM2 988 aa16.58■□□□□ 0.24
SDC2-201ENST00000302190 PES1O00541 588 aaKnown RBP16.58■□□□□ 0.24
SDC2-201ENST00000302190 TATP17735 454 aaPredicted RBP16.58■□□□□ 0.24
SDC2-201ENST00000302190 STK38Q15208 465 aa16.58■□□□□ 0.24
SDC2-201ENST00000302190 CCDC82Q8N4S0 544 aa16.58■□□□□ 0.24
SDC2-201ENST00000302190 TPM4P67936 248 aa16.57■□□□□ 0.24
SDC2-201ENST00000302190 TRDNQ13061 729 aa16.57■□□□□ 0.24
SDC2-201ENST00000302190 CCDC129Q6ZRS4 1044 aa16.57■□□□□ 0.24
SDC2-201ENST00000302190 LUZP1Q86V48 1076 aa16.57■□□□□ 0.24
SDC2-201ENST00000302190 XAGE3Q8WTP9 111 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms