RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 FKBP4Q02790 459 aaKnown RBP eCLIP23.71■■□□□ 1.39
TMEM88-201ENST00000301599 TCIRG1Q13488 830 aa23.71■■□□□ 1.39
TMEM88-201ENST00000301599 SLC10A5Q5PT55 438 aa23.71■■□□□ 1.39
TMEM88-201ENST00000301599 DUSP27Q5VZP5 1158 aa23.71■■□□□ 1.39
TMEM88-201ENST00000301599 RBM17Q96I25 401 aaKnown RBP23.71■■□□□ 1.39
TMEM88-201ENST00000301599 NLRP3Q96P20 1036 aa23.71■■□□□ 1.39
TMEM88-201ENST00000301599 MBIPQ9NS73 344 aa23.71■■□□□ 1.39
TMEM88-201ENST00000301599 IFT57Q9NWB7 429 aa23.71■■□□□ 1.39
TMEM88-201ENST00000301599 CHPF2Q9P2E5 772 aa23.71■■□□□ 1.39
TMEM88-201ENST00000301599 DBF4Q9UBU7 674 aaPredicted RBP23.71■■□□□ 1.39
TMEM88-201ENST00000301599 CCDC88AQ3V6T2 1871 aa23.7■■□□□ 1.39
TMEM88-201ENST00000301599 CC2D2BQ6DHV5 1058 aa23.7■■□□□ 1.38
TMEM88-201ENST00000301599 CRAMP1Q96RY5 1269 aa23.7■■□□□ 1.38
TMEM88-201ENST00000301599 OLFM4Q6UX06 510 aa23.69■■□□□ 1.38
TMEM88-201ENST00000301599 RIC1Q4ADV7 1423 aa23.68■■□□□ 1.38
TMEM88-201ENST00000301599 RNF123Q5XPI4 1314 aa23.68■■□□□ 1.38
TMEM88-201ENST00000301599 CCDC184Q52MB2 194 aa23.68■■□□□ 1.38
TMEM88-201ENST00000301599 ANKRD13DQ6ZTN6 518 aa23.68■■□□□ 1.38
TMEM88-201ENST00000301599 SYNE4Q8N205 404 aa23.68■■□□□ 1.38
TMEM88-201ENST00000301599 SMC1BQ8NDV3 1235 aa23.68■■□□□ 1.38
TMEM88-201ENST00000301599 HYPKQ9NX55 129 aa23.68■■□□□ 1.38
TMEM88-201ENST00000301599 GRIPAP1Q4V328 841 aa23.67■■□□□ 1.38
TMEM88-201ENST00000301599 NLRP10Q86W26 655 aa23.67■■□□□ 1.38
TMEM88-201ENST00000301599 PLBD2Q8NHP8 589 aa23.67■■□□□ 1.38
TMEM88-201ENST00000301599 ZNF277Q9NRM2 450 aaPredicted RBP23.67■■□□□ 1.38
TMEM88-201ENST00000301599 ARFGEF2Q9Y6D5 1785 aa23.66■■□□□ 1.38
TMEM88-201ENST00000301599 POTECB2RU33 542 aa23.66■■□□□ 1.38
TMEM88-201ENST00000301599 TRMT112Q9UI30 125 aaKnown RBP23.66■■□□□ 1.38
TMEM88-201ENST00000301599 TNRC6CQ9HCJ0 1690 aaKnown RBP23.65■■□□□ 1.38
TMEM88-201ENST00000301599 DDNO94850 711 aaPredicted RBP23.65■■□□□ 1.38
TMEM88-201ENST00000301599 PSMD1Q99460 953 aa23.65■■□□□ 1.38
TMEM88-201ENST00000301599 CHMP4AQ9BY43 222 aa23.65■■□□□ 1.38
TMEM88-201ENST00000301599 CACNA1SQ13698 1873 aa23.64■■□□□ 1.38
TMEM88-201ENST00000301599 ANP32CO43423 234 aa23.64■■□□□ 1.37
TMEM88-201ENST00000301599 C3orf67Q6ZVT6 689 aa23.64■■□□□ 1.37
TMEM88-201ENST00000301599 TMX4Q9H1E5 349 aaPredicted RBP23.64■■□□□ 1.37
TMEM88-201ENST00000301599 DICER1Q9UPY3 1922 aaKnown RBP23.63■■□□□ 1.37
TMEM88-201ENST00000301599 CEP350Q5VT06 3117 aa23.63■■□□□ 1.37
TMEM88-201ENST00000301599 ELL2O00472 640 aaPredicted RBP23.63■■□□□ 1.37
TMEM88-201ENST00000301599 IARSP41252 1262 aaKnown RBP23.63■■□□□ 1.37
TMEM88-201ENST00000301599 TIAM2Q8IVF5 1701 aa23.62■■□□□ 1.37
TMEM88-201ENST00000301599 SH3TC1Q8TE82 1336 aa23.61■■□□□ 1.37
TMEM88-201ENST00000301599 TCERG1O14776 1098 aaKnown RBP23.61■■□□□ 1.37
TMEM88-201ENST00000301599 PPEF1O14829 653 aaPredicted RBP23.61■■□□□ 1.37
TMEM88-201ENST00000301599 HCLS1P14317 486 aaPredicted RBP23.61■■□□□ 1.37
TMEM88-201ENST00000301599 JDP2Q8WYK2 163 aa23.61■■□□□ 1.37
TMEM88-201ENST00000301599 BBOX1O75936 387 aa23.6■■□□□ 1.37
TMEM88-201ENST00000301599 CCDC27Q2M243 656 aa23.6■■□□□ 1.37
TMEM88-201ENST00000301599 DNAJC5GQ8N7S2 189 aa23.6■■□□□ 1.37
TMEM88-201ENST00000301599 C8orf58Q8NAV2 365 aa23.6■■□□□ 1.37
TMEM88-201ENST00000301599 ISCA1Q9BUE6 129 aa23.6■■□□□ 1.37
TMEM88-201ENST00000301599 MRS2Q9HD23 443 aa23.6■■□□□ 1.37
TMEM88-201ENST00000301599 IQCA1LA6NCM1 817 aa23.59■■□□□ 1.37
TMEM88-201ENST00000301599 WDR90Q96KV7 1748 aa23.59■■□□□ 1.37
TMEM88-201ENST00000301599 ATP5J2-PTCD1G3V325 749 aa23.58■■□□□ 1.37
TMEM88-201ENST00000301599 FZD9O00144 591 aa23.58■■□□□ 1.37
TMEM88-201ENST00000301599 TRIM28Q13263 835 aaKnown RBP23.58■■□□□ 1.37
TMEM88-201ENST00000301599 DDX46Q7L014 1031 aaKnown RBP23.58■■□□□ 1.37
TMEM88-201ENST00000301599 RIC3Q7Z5B4 369 aa23.58■■□□□ 1.37
TMEM88-201ENST00000301599 L3MBTL3Q96JM7 780 aaPredicted RBP23.58■■□□□ 1.37
TMEM88-201ENST00000301599 ATP6V0A2Q9Y487 856 aa23.58■■□□□ 1.37
TMEM88-201ENST00000301599 GOLGA2Q08379 1002 aa23.57■■□□□ 1.36
TMEM88-201ENST00000301599 NCBP3Q53F19 620 aaKnown RBP23.57■■□□□ 1.36
TMEM88-201ENST00000301599 CCDC30Q5VVM6 783 aa23.57■■□□□ 1.36
TMEM88-201ENST00000301599 WWC1Q8IX03 1113 aa23.57■■□□□ 1.36
TMEM88-201ENST00000301599 SP8Q8IXZ3 490 aa23.56■■□□□ 1.36
TMEM88-201ENST00000301599 PHAXQ9H814 394 aaKnown RBP23.56■■□□□ 1.36
TMEM88-201ENST00000301599 ABCC4O15439 1325 aa23.56■■□□□ 1.36
TMEM88-201ENST00000301599 FAM89AQ96GI7 184 aa23.55■■□□□ 1.36
TMEM88-201ENST00000301599 VPS33BQ9H267 617 aa23.55■■□□□ 1.36
TMEM88-201ENST00000301599 SNED1Q8TER0 1413 aa23.55■■□□□ 1.36
TMEM88-201ENST00000301599 EIF6P56537 245 aaKnown RBP23.54■■□□□ 1.36
TMEM88-201ENST00000301599 CHADLQ6NUI6 762 aa23.54■■□□□ 1.36
TMEM88-201ENST00000301599 LARGE2Q8N3Y3 721 aa23.54■■□□□ 1.36
TMEM88-201ENST00000301599 ZNF428Q96B54 188 aa23.54■■□□□ 1.36
TMEM88-201ENST00000301599 ZNF541Q9H0D2 1346 aa23.54■■□□□ 1.36
TMEM88-201ENST00000301599 GPC2Q8N158 579 aa23.53■■□□□ 1.36
TMEM88-201ENST00000301599 SUPT20HQ8NEM7 779 aa23.53■■□□□ 1.36
TMEM88-201ENST00000301599 TAF1DQ9H5J8 278 aaPredicted RBP23.53■■□□□ 1.36
TMEM88-201ENST00000301599 DDX58O95786 925 aaKnown RBP23.52■■□□□ 1.36
TMEM88-201ENST00000301599 HTRA3P83110 453 aa23.52■■□□□ 1.36
TMEM88-201ENST00000301599 GRAPQ13588 217 aa23.52■■□□□ 1.36
TMEM88-201ENST00000301599 TMC4Q7Z404 712 aa23.52■■□□□ 1.36
TMEM88-201ENST00000301599 TSPYL6Q8N831 410 aa23.52■■□□□ 1.36
TMEM88-201ENST00000301599 GRAPLQ8TC17 118 aaPredicted RBP23.52■■□□□ 1.36
TMEM88-201ENST00000301599 HACL1Q9UJ83 578 aa23.52■■□□□ 1.36
TMEM88-201ENST00000301599 ANKRD36CQ5JPF3 1778 aa23.52■■□□□ 1.36
TMEM88-201ENST00000301599 SF3B3Q15393 1217 aaKnown RBP23.51■■□□□ 1.35
TMEM88-201ENST00000301599 MPNDQ8N594 471 aa23.51■■□□□ 1.35
TMEM88-201ENST00000301599 TSR2Q969E8 191 aaKnown RBP23.51■■□□□ 1.35
TMEM88-201ENST00000301599 IL16Q14005 1332 aa23.51■■□□□ 1.35
TMEM88-201ENST00000301599 HSP90B1P14625 803 aaKnown RBP23.5■■□□□ 1.35
TMEM88-201ENST00000301599 DPP8Q6V1X1 898 aaPredicted RBP23.5■■□□□ 1.35
TMEM88-201ENST00000301599 KLRG1Q96E93 195 aa23.5■■□□□ 1.35
TMEM88-201ENST00000301599 RTFDC1Q9BY42 306 aaPredicted RBP23.5■■□□□ 1.35
TMEM88-201ENST00000301599 IRS4O14654 1257 aaPredicted RBP23.49■■□□□ 1.35
TMEM88-201ENST00000301599 PPIP5K2O43314 1243 aa23.49■■□□□ 1.35
TMEM88-201ENST00000301599 RTL5Q5HYW3 569 aaPredicted RBP23.49■■□□□ 1.35
TMEM88-201ENST00000301599 SLC51AQ86UW1 340 aa23.49■■□□□ 1.35
TMEM88-201ENST00000301599 LDHDQ86WU2 507 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms