RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 MCM10Q7L590 875 aa16.95■□□□□ 0.3
CDT1-201ENST00000301019 PTPRCP08575 1304 aa16.95■□□□□ 0.3
CDT1-201ENST00000301019 PNMA6EA0A0J9YXQ4 647 aa16.95■□□□□ 0.3
CDT1-201ENST00000301019 PRPF40BQ6NWY9 871 aaKnown RBP16.95■□□□□ 0.3
CDT1-201ENST00000301019 G2E3Q7L622 706 aa16.95■□□□□ 0.3
CDT1-201ENST00000301019 PLA2G4DQ86XP0 818 aa16.95■□□□□ 0.3
CDT1-201ENST00000301019 LIMCH1Q9UPQ0 1083 aa16.95■□□□□ 0.3
CDT1-201ENST00000301019 SNX14Q9Y5W7 946 aa16.95■□□□□ 0.3
CDT1-201ENST00000301019 BIN1O00499 593 aa16.94■□□□□ 0.3
CDT1-201ENST00000301019 KRT85P78386 507 aa16.94■□□□□ 0.3
CDT1-201ENST00000301019 SYCP1Q15431 976 aa16.94■□□□□ 0.3
CDT1-201ENST00000301019 ICE2Q659A1 982 aa16.94■□□□□ 0.3
CDT1-201ENST00000301019 TSPYL1Q9H0U9 437 aa16.94■□□□□ 0.3
CDT1-201ENST00000301019 SMC1AQ14683 1233 aaKnown RBP16.94■□□□□ 0.3
CDT1-201ENST00000301019 PACS2Q86VP3 889 aa16.94■□□□□ 0.3
CDT1-201ENST00000301019 CFAP44Q96MT7 982 aa16.94■□□□□ 0.3
CDT1-201ENST00000301019 PDRG1Q9NUG6 133 aa16.93■□□□□ 0.3
CDT1-201ENST00000301019 VPS18Q9P253 973 aa16.93■□□□□ 0.3
CDT1-201ENST00000301019 JRKLQ9Y4A0 524 aa16.93■□□□□ 0.3
CDT1-201ENST00000301019 EMILIN1Q9Y6C2 1016 aa16.93■□□□□ 0.3
CDT1-201ENST00000301019 TMEM2Q9UHN6 1383 aa16.93■□□□□ 0.3
CDT1-201ENST00000301019 TPM4P67936 248 aa16.93■□□□□ 0.3
CDT1-201ENST00000301019 TMC6Q7Z403 805 aa16.93■□□□□ 0.3
CDT1-201ENST00000301019 TXLNBQ8N3L3 684 aa16.93■□□□□ 0.3
CDT1-201ENST00000301019 HDGFP51858 240 aaKnown RBP16.92■□□□□ 0.3
CDT1-201ENST00000301019 AOPEPQ8N6M6 819 aa16.92■□□□□ 0.3
CDT1-201ENST00000301019 FYB1O15117 783 aa16.92■□□□□ 0.3
CDT1-201ENST00000301019 GNAI1P63096 354 aa16.92■□□□□ 0.3
CDT1-201ENST00000301019 GPS2Q13227 327 aa16.92■□□□□ 0.3
CDT1-201ENST00000301019 DNAJC21Q5F1R6 531 aaKnown RBP16.92■□□□□ 0.3
CDT1-201ENST00000301019 NYAP1Q6ZVC0 841 aa16.92■□□□□ 0.3
CDT1-201ENST00000301019 UBR1Q8IWV7 1749 aa16.92■□□□□ 0.3
CDT1-201ENST00000301019 RPAP2Q8IXW5 612 aaPredicted RBP16.92■□□□□ 0.3
CDT1-201ENST00000301019 MYOM1P52179 1685 aa16.92■□□□□ 0.3
CDT1-201ENST00000301019 CCZ1BP86790 482 aa16.91■□□□□ 0.3
CDT1-201ENST00000301019 CCZ1P86791 482 aaPredicted RBP16.91■□□□□ 0.3
CDT1-201ENST00000301019 DHX8Q14562 1220 aaKnown RBP16.91■□□□□ 0.3
CDT1-201ENST00000301019 LRRCC1Q9C099 1032 aa16.91■□□□□ 0.3
CDT1-201ENST00000301019 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDT1-201ENST00000301019 KDM5AP29375 1690 aaKnown RBP16.91■□□□□ 0.3
CDT1-201ENST00000301019 RIMS1Q86UR5 1692 aaKnown RBP16.91■□□□□ 0.3
CDT1-201ENST00000301019 H2AFXP16104 143 aaPredicted RBP16.91■□□□□ 0.3
CDT1-201ENST00000301019 LMOD3Q0VAK6 560 aa16.91■□□□□ 0.3
CDT1-201ENST00000301019 ME3Q16798 604 aa16.91■□□□□ 0.3
CDT1-201ENST00000301019 CT47A1Q5JQC4 288 aaPredicted RBP16.91■□□□□ 0.3
CDT1-201ENST00000301019 TMEM87AQ8NBN3 555 aa16.91■□□□□ 0.3
CDT1-201ENST00000301019 SHPRHQ149N8 1683 aa16.91■□□□□ 0.3
CDT1-201ENST00000301019 CCDC171Q6TFL3 1326 aa16.91■□□□□ 0.3
CDT1-201ENST00000301019 ALKQ9UM73 1620 aa16.91■□□□□ 0.3
CDT1-201ENST00000301019 RGS12O14924 1447 aa16.9■□□□□ 0.3
CDT1-201ENST00000301019 SRLQ86TD4 932 aa16.9■□□□□ 0.3
CDT1-201ENST00000301019 ARGLU1Q9NWB6 273 aaPredicted RBP16.9■□□□□ 0.3
CDT1-201ENST00000301019 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
CDT1-201ENST00000301019 ADAMTSL3P82987 1691 aa16.9■□□□□ 0.3
CDT1-201ENST00000301019 EVCP57679 992 aa16.9■□□□□ 0.3
CDT1-201ENST00000301019 RRS1Q15050 365 aaKnown RBP16.9■□□□□ 0.3
CDT1-201ENST00000301019 E4F1Q66K89 784 aaPredicted RBP16.9■□□□□ 0.3
CDT1-201ENST00000301019 LARP1Q6PKG0 1096 aaKnown RBP16.9■□□□□ 0.3
CDT1-201ENST00000301019 EFCC1Q9HA90 598 aa16.9■□□□□ 0.3
CDT1-201ENST00000301019 SUGCTQ9HAC7 445 aa16.9■□□□□ 0.3
CDT1-201ENST00000301019 ADAM21Q9UKJ8 722 aa16.9■□□□□ 0.3
CDT1-201ENST00000301019 PATL2C9JE40 543 aaKnown RBP16.89■□□□□ 0.29
CDT1-201ENST00000301019 HMMRO75330 724 aa16.89■□□□□ 0.29
CDT1-201ENST00000301019 TTC31Q49AM3 519 aaPredicted RBP16.89■□□□□ 0.29
CDT1-201ENST00000301019 BANK1Q8NDB2 785 aa16.89■□□□□ 0.29
CDT1-201ENST00000301019 PPP1R13BQ96KQ4 1090 aa16.89■□□□□ 0.29
CDT1-201ENST00000301019 N4BP1O75113 896 aaKnown RBP16.89■□□□□ 0.29
CDT1-201ENST00000301019 EVC2Q86UK5 1308 aa16.89■□□□□ 0.29
CDT1-201ENST00000301019 SBNO2Q9Y2G9 1366 aa16.89■□□□□ 0.29
CDT1-201ENST00000301019 GUCY1B3Q02153 619 aa16.89■□□□□ 0.29
CDT1-201ENST00000301019 NFE2L2Q16236 605 aa16.89■□□□□ 0.29
CDT1-201ENST00000301019 ARHGAP45Q92619 1136 aa16.89■□□□□ 0.29
CDT1-201ENST00000301019 RTL1A6NKG5 1358 aa16.88■□□□□ 0.29
CDT1-201ENST00000301019 FAM53CQ9NYF3 392 aa16.88■□□□□ 0.29
CDT1-201ENST00000301019 MYO3AQ8NEV4 1616 aa16.88■□□□□ 0.29
CDT1-201ENST00000301019 SIL1Q9H173 461 aa16.88■□□□□ 0.29
CDT1-201ENST00000301019 H3BQF6 201 aa16.87■□□□□ 0.29
CDT1-201ENST00000301019 PGBD1Q96JS3 809 aa16.87■□□□□ 0.29
CDT1-201ENST00000301019 IL16Q14005 1332 aa16.87■□□□□ 0.29
CDT1-201ENST00000301019 HSP90B1P14625 803 aaKnown RBP16.87■□□□□ 0.29
CDT1-201ENST00000301019 HSPA4P34932 840 aa16.87■□□□□ 0.29
CDT1-201ENST00000301019 PTH1RQ03431 593 aa16.87■□□□□ 0.29
CDT1-201ENST00000301019 CNPY4Q8N129 248 aa16.87■□□□□ 0.29
CDT1-201ENST00000301019 GOLGA6L1Q8N7Z2 621 aa16.87■□□□□ 0.29
CDT1-201ENST00000301019 YTHDC2Q9H6S0 1430 aaKnown RBP16.87■□□□□ 0.29
CDT1-201ENST00000301019 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
CDT1-201ENST00000301019 ORC3Q9UBD5 711 aaPredicted RBP16.87■□□□□ 0.29
CDT1-201ENST00000301019 GNAI3P08754 354 aa16.87■□□□□ 0.29
CDT1-201ENST00000301019 LTKP29376 864 aa16.87■□□□□ 0.29
CDT1-201ENST00000301019 LEKR1Q6ZMV7 388 aa16.87■□□□□ 0.29
CDT1-201ENST00000301019 JAK2O60674 1132 aa16.86■□□□□ 0.29
CDT1-201ENST00000301019 PPARDQ03181 441 aa16.86■□□□□ 0.29
CDT1-201ENST00000301019 REXO1L1PQ8IX06 675 aa16.86■□□□□ 0.29
CDT1-201ENST00000301019 CWC15Q9P013 229 aaKnown RBP16.86■□□□□ 0.29
CDT1-201ENST00000301019 IFNKQ9P0W0 207 aa16.86■□□□□ 0.29
CDT1-201ENST00000301019 PTPRMP28827 1452 aa16.86■□□□□ 0.29
CDT1-201ENST00000301019 ECM2O94769 699 aaPredicted RBP16.86■□□□□ 0.29
CDT1-201ENST00000301019 TFRCP02786 760 aaKnown RBP16.86■□□□□ 0.29
CDT1-201ENST00000301019 TXNDC2Q86VQ3 553 aa16.86■□□□□ 0.29
CDT1-201ENST00000301019 MYCBPQ99417 103 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms