RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 STX6O43752 255 aa15.49■□□□□ 0.07
HIF3A-204ENST00000300862 PHKG2P15735 406 aa15.49■□□□□ 0.07
HIF3A-204ENST00000300862 RBM8AQ9Y5S9 174 aaKnown RBP15.49■□□□□ 0.07
HIF3A-204ENST00000300862 NDUFB9Q9Y6M9 179 aa15.49■□□□□ 0.07
HIF3A-204ENST00000300862 KDM6AO15550 1401 aaPredicted RBP15.48■□□□□ 0.07
HIF3A-204ENST00000300862 A0A0D9SFI3 127 aa15.48■□□□□ 0.07
HIF3A-204ENST00000300862 ZSCAN22P10073 491 aaPredicted RBP15.48■□□□□ 0.07
HIF3A-204ENST00000300862 NEXNQ0ZGT2 675 aa15.48■□□□□ 0.07
HIF3A-204ENST00000300862 GCKRQ14397 625 aa15.48■□□□□ 0.07
HIF3A-204ENST00000300862 LARP1Q6PKG0 1096 aaKnown RBP15.48■□□□□ 0.07
HIF3A-204ENST00000300862 HDAC5Q9UQL6 1122 aa15.48■□□□□ 0.07
HIF3A-204ENST00000300862 TAF6LQ9Y6J9 622 aa15.48■□□□□ 0.07
HIF3A-204ENST00000300862 C1orf167Q5SNV9 1468 aa15.48■□□□□ 0.07
HIF3A-204ENST00000300862 UTYO14607 1347 aa15.48■□□□□ 0.07
HIF3A-204ENST00000300862 CCDC171Q6TFL3 1326 aa15.48■□□□□ 0.07
HIF3A-204ENST00000300862 TATP17735 454 aaPredicted RBP15.48■□□□□ 0.07
HIF3A-204ENST00000300862 NECTIN1Q15223 517 aa15.48■□□□□ 0.07
HIF3A-204ENST00000300862 FSD1Q9BTV5 496 aa15.48■□□□□ 0.07
HIF3A-204ENST00000300862 C19orf44Q9H6X5 657 aa15.48■□□□□ 0.07
HIF3A-204ENST00000300862 OVOS2A0A0G2JMS6 1433 aa15.47■□□□□ 0.07
HIF3A-204ENST00000300862 ATP5J2-PTCD1G3V325 749 aa15.47■□□□□ 0.07
HIF3A-204ENST00000300862 FIBPO43427 364 aa15.47■□□□□ 0.07
HIF3A-204ENST00000300862 PTCD1O75127 700 aaKnown RBP15.47■□□□□ 0.07
HIF3A-204ENST00000300862 CREB3L3Q68CJ9 461 aa15.47■□□□□ 0.07
HIF3A-204ENST00000300862 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.47■□□□□ 0.07
HIF3A-204ENST00000300862 CYP46A1Q9Y6A2 500 aa15.47■□□□□ 0.07
HIF3A-204ENST00000300862 GJB2P29033 226 aa15.47■□□□□ 0.07
HIF3A-204ENST00000300862 PDCL3Q9H2J4 239 aa15.47■□□□□ 0.07
HIF3A-204ENST00000300862 ZSWIM6Q9HCJ5 1215 aa15.47■□□□□ 0.07
HIF3A-204ENST00000300862 CHGBP05060 677 aa15.46■□□□□ 0.07
HIF3A-204ENST00000300862 PDIA4P13667 645 aaKnown RBP15.46■□□□□ 0.07
HIF3A-204ENST00000300862 ST3GAL1Q11201 340 aa15.46■□□□□ 0.07
HIF3A-204ENST00000300862 ME3Q16798 604 aa15.46■□□□□ 0.07
HIF3A-204ENST00000300862 PDLIM2Q96JY6 352 aa15.46■□□□□ 0.07
HIF3A-204ENST00000300862 CCDC9Q9Y3X0 531 aaKnown RBP15.46■□□□□ 0.07
HIF3A-204ENST00000300862 MSNP26038 577 aaKnown RBP15.46■□□□□ 0.07
HIF3A-204ENST00000300862 VPS53Q5VIR6 699 aa15.46■□□□□ 0.07
HIF3A-204ENST00000300862 ANKRD13DQ6ZTN6 518 aa15.46■□□□□ 0.07
HIF3A-204ENST00000300862 METTL22Q9BUU2 404 aaPredicted RBP15.46■□□□□ 0.07
HIF3A-204ENST00000300862 TSPY26PQ9H489 355 aa15.46■□□□□ 0.07
HIF3A-204ENST00000300862 MEGF6O75095 1541 aa15.45■□□□□ 0.06
HIF3A-204ENST00000300862 CYP27B1O15528 508 aa15.45■□□□□ 0.06
HIF3A-204ENST00000300862 ZKSCAN1P17029 563 aaPredicted RBP15.45■□□□□ 0.06
HIF3A-204ENST00000300862 UBE3BQ7Z3V4 1068 aa15.45■□□□□ 0.06
HIF3A-204ENST00000300862 ZNF142P52746 1687 aaPredicted RBP15.45■□□□□ 0.06
HIF3A-204ENST00000300862 CRYBG1Q9Y4K1 1723 aa15.45■□□□□ 0.06
HIF3A-204ENST00000300862 F13A1P00488 732 aa15.45■□□□□ 0.06
HIF3A-204ENST00000300862 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.45■□□□□ 0.06
HIF3A-204ENST00000300862 ZNF589Q86UQ0 364 aaPredicted RBP15.45■□□□□ 0.06
HIF3A-204ENST00000300862 TPCN1Q9ULQ1 816 aa15.45■□□□□ 0.06
HIF3A-204ENST00000300862 VPS37CA5D8V6 355 aaPredicted RBP15.44■□□□□ 0.06
HIF3A-204ENST00000300862 SLC27A2O14975 620 aa15.44■□□□□ 0.06
HIF3A-204ENST00000300862 IFNL2Q8IZJ0 200 aa15.44■□□□□ 0.06
HIF3A-204ENST00000300862 TTC5Q8N0Z6 440 aa15.44■□□□□ 0.06
HIF3A-204ENST00000300862 MAP4K1Q92918 833 aa15.44■□□□□ 0.06
HIF3A-204ENST00000300862 SYAP1Q96A49 352 aaPredicted RBP15.44■□□□□ 0.06
HIF3A-204ENST00000300862 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.44■□□□□ 0.06
HIF3A-204ENST00000300862 TRPM3Q9HCF6 1732 aaPredicted RBP15.44■□□□□ 0.06
HIF3A-204ENST00000300862 ATF3P18847 181 aa15.44■□□□□ 0.06
HIF3A-204ENST00000300862 DNM1Q05193 864 aaKnown RBP15.44■□□□□ 0.06
HIF3A-204ENST00000300862 MPNDQ8N594 471 aa15.44■□□□□ 0.06
HIF3A-204ENST00000300862 SIPA1L3O60292 1781 aaPredicted RBP15.44■□□□□ 0.06
HIF3A-204ENST00000300862 TFCP2Q12800 502 aa15.43■□□□□ 0.06
HIF3A-204ENST00000300862 LRP10Q7Z4F1 713 aa15.43■□□□□ 0.06
HIF3A-204ENST00000300862 KCNB2Q92953 911 aa15.43■□□□□ 0.06
HIF3A-204ENST00000300862 SNRPA1P09661 255 aaKnown RBP15.43■□□□□ 0.06
HIF3A-204ENST00000300862 PDE4CQ08493 712 aa15.43■□□□□ 0.06
HIF3A-204ENST00000300862 TM6SF1Q9BZW5 370 aa15.43■□□□□ 0.06
HIF3A-204ENST00000300862 DBNLQ9UJU6 430 aaKnown RBP15.43■□□□□ 0.06
HIF3A-204ENST00000300862 MTMR6Q9Y217 621 aa15.43■□□□□ 0.06
HIF3A-204ENST00000300862 C5P01031 1676 aa15.42■□□□□ 0.06
HIF3A-204ENST00000300862 HS1BP3Q53T59 392 aa15.42■□□□□ 0.06
HIF3A-204ENST00000300862 NOL7Q9UMY1 257 aaKnown RBP15.42■□□□□ 0.06
HIF3A-204ENST00000300862 A0A087WZG4 1122 aa15.41■□□□□ 0.06
HIF3A-204ENST00000300862 TERF1P54274 439 aa15.41■□□□□ 0.06
HIF3A-204ENST00000300862 PTPN12Q05209 780 aaKnown RBP15.41■□□□□ 0.06
HIF3A-204ENST00000300862 FAM173BQ6P4H8 233 aa15.41■□□□□ 0.06
HIF3A-204ENST00000300862 FERMT3Q86UX7 667 aa15.41■□□□□ 0.06
HIF3A-204ENST00000300862 HIP1O00291 1037 aa15.41■□□□□ 0.06
HIF3A-204ENST00000300862 STK3Q13188 491 aa15.41■□□□□ 0.06
HIF3A-204ENST00000300862 TMEM87AQ8NBN3 555 aa15.41■□□□□ 0.06
HIF3A-204ENST00000300862 DNAJC2Q99543 621 aaKnown RBP15.41■□□□□ 0.06
HIF3A-204ENST00000300862 CAMTA1Q9Y6Y1 1673 aa15.41■□□□□ 0.06
HIF3A-204ENST00000300862 RFX5P48382 616 aaPredicted RBP15.4■□□□□ 0.06
HIF3A-204ENST00000300862 CABP4P57796 275 aa15.4■□□□□ 0.06
HIF3A-204ENST00000300862 RBM10P98175 930 aaKnown RBP15.4■□□□□ 0.06
HIF3A-204ENST00000300862 CCDC129Q6ZRS4 1044 aa15.4■□□□□ 0.06
HIF3A-204ENST00000300862 ZSCAN31Q96LW9 406 aaPredicted RBP15.4■□□□□ 0.06
HIF3A-204ENST00000300862 SH2B1Q9NRF2 756 aaPredicted RBP15.4■□□□□ 0.06
HIF3A-204ENST00000300862 CHMP3Q9Y3E7 222 aa15.4■□□□□ 0.06
HIF3A-204ENST00000300862 ZNF500O60304 480 aaPredicted RBP15.4■□□□□ 0.06
HIF3A-204ENST00000300862 UBE2HP62256 183 aa15.4■□□□□ 0.06
HIF3A-204ENST00000300862 TNNI3KQ59H18 835 aa15.4■□□□□ 0.06
HIF3A-204ENST00000300862 BLOC1S2Q6QNY1 142 aa15.4■□□□□ 0.06
HIF3A-204ENST00000300862 DCAF5Q96JK2 942 aa15.4■□□□□ 0.06
HIF3A-204ENST00000300862 FMNL2Q96PY5 1086 aa15.4■□□□□ 0.06
HIF3A-204ENST00000300862 SEC62Q99442 399 aaKnown RBP15.4■□□□□ 0.06
HIF3A-204ENST00000300862 DBNDD2Q9BQY9 259 aa15.4■□□□□ 0.06
HIF3A-204ENST00000300862 R3HCC1Q9Y3T6 440 aaKnown RBP15.4■□□□□ 0.06
HIF3A-204ENST00000300862 FPGT-TNNI3KV9GXZ4 949 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms