RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 IL1RAPL2Q9NP60 686 aa19.35■□□□□ 0.69
HERPUD1-201ENST00000300302 BTAF1O14981 1849 aa19.34■□□□□ 0.69
HERPUD1-201ENST00000300302 COL5A3P25940 1745 aaPredicted RBP19.34■□□□□ 0.69
HERPUD1-201ENST00000300302 EIF5BO60841 1220 aaKnown RBP19.34■□□□□ 0.69
HERPUD1-201ENST00000300302 PA2G4Q9UQ80 394 aaKnown RBP19.34■□□□□ 0.69
HERPUD1-201ENST00000300302 AOX1Q06278 1338 aa19.34■□□□□ 0.69
HERPUD1-201ENST00000300302 HLFQ16534 295 aa19.33■□□□□ 0.69
HERPUD1-201ENST00000300302 CLASRPQ8N2M8 674 aaKnown RBP19.33■□□□□ 0.69
HERPUD1-201ENST00000300302 STAP2Q9UGK3 403 aa19.33■□□□□ 0.69
HERPUD1-201ENST00000300302 TBC1D2BQ9UPU7 963 aa19.33■□□□□ 0.69
HERPUD1-201ENST00000300302 ANKRD36CQ5JPF3 1778 aa19.33■□□□□ 0.68
HERPUD1-201ENST00000300302 CDC45O75419 566 aa19.33■□□□□ 0.68
HERPUD1-201ENST00000300302 PCCAP05165 728 aaPredicted RBP19.33■□□□□ 0.68
HERPUD1-201ENST00000300302 ZBTB38Q8NAP3 1195 aaPredicted RBP19.33■□□□□ 0.68
HERPUD1-201ENST00000300302 COPRSQ9NQ92 184 aa19.33■□□□□ 0.68
HERPUD1-201ENST00000300302 FOXO4P98177 505 aa19.32■□□□□ 0.68
HERPUD1-201ENST00000300302 RTL5Q5HYW3 569 aaPredicted RBP19.32■□□□□ 0.68
HERPUD1-201ENST00000300302 LMBR1LQ6UX01 489 aa19.32■□□□□ 0.68
HERPUD1-201ENST00000300302 FAM196AQ6ZSG2 479 aa19.32■□□□□ 0.68
HERPUD1-201ENST00000300302 NUP98P52948 1817 aa19.31■□□□□ 0.68
HERPUD1-201ENST00000300302 SBF2Q86WG5 1849 aa19.31■□□□□ 0.68
HERPUD1-201ENST00000300302 KCNQ4P56696 695 aa19.31■□□□□ 0.68
HERPUD1-201ENST00000300302 NLRP10Q86W26 655 aa19.31■□□□□ 0.68
HERPUD1-201ENST00000300302 IPO9Q96P70 1041 aaKnown RBP19.31■□□□□ 0.68
HERPUD1-201ENST00000300302 CNTNAP4Q9C0A0 1308 aa19.3■□□□□ 0.68
HERPUD1-201ENST00000300302 BRWD3Q6RI45 1802 aa19.3■□□□□ 0.68
HERPUD1-201ENST00000300302 CASC1Q6TDU7 716 aa19.3■□□□□ 0.68
HERPUD1-201ENST00000300302 LINC00116Q8NCU8 138 aa19.3■□□□□ 0.68
HERPUD1-201ENST00000300302 DDRGK1Q96HY6 314 aa19.3■□□□□ 0.68
HERPUD1-201ENST00000300302 CHMP3Q9Y3E7 222 aa19.3■□□□□ 0.68
HERPUD1-201ENST00000300302 MYH14Q7Z406 1995 aaKnown RBP19.3■□□□□ 0.68
HERPUD1-201ENST00000300302 SDSP20132 328 aa19.29■□□□□ 0.68
HERPUD1-201ENST00000300302 GPTP24298 496 aa19.29■□□□□ 0.68
HERPUD1-201ENST00000300302 RFX5P48382 616 aaPredicted RBP19.29■□□□□ 0.68
HERPUD1-201ENST00000300302 TBC1D9Q6ZT07 1266 aa19.29■□□□□ 0.68
HERPUD1-201ENST00000300302 NUTM1Q86Y26 1132 aa19.29■□□□□ 0.68
HERPUD1-201ENST00000300302 BCL11BQ9C0K0 894 aaPredicted RBP19.29■□□□□ 0.68
HERPUD1-201ENST00000300302 SIL1Q9H173 461 aa19.29■□□□□ 0.68
HERPUD1-201ENST00000300302 CDHR2Q9BYE9 1310 aa19.29■□□□□ 0.68
HERPUD1-201ENST00000300302 MFAP1P55081 439 aaKnown RBP19.28■□□□□ 0.68
HERPUD1-201ENST00000300302 PTPN12Q05209 780 aaKnown RBP19.28■□□□□ 0.68
HERPUD1-201ENST00000300302 GPATCH3Q96I76 525 aa19.28■□□□□ 0.68
HERPUD1-201ENST00000300302 PLA2G12BQ9BX93 195 aa19.28■□□□□ 0.68
HERPUD1-201ENST00000300302 TRIM37O94972 964 aa19.28■□□□□ 0.68
HERPUD1-201ENST00000300302 IFIT2P09913 472 aaKnown RBP19.28■□□□□ 0.68
HERPUD1-201ENST00000300302 ILDR1Q86SU0 546 aaPredicted RBP19.28■□□□□ 0.68
HERPUD1-201ENST00000300302 ZNF34Q8IZ26 560 aa19.28■□□□□ 0.68
HERPUD1-201ENST00000300302 KLHDC4Q8TBB5 520 aa19.28■□□□□ 0.68
HERPUD1-201ENST00000300302 FAM89AQ96GI7 184 aa19.28■□□□□ 0.68
HERPUD1-201ENST00000300302 CCNL1Q9UK58 526 aaPredicted RBP19.28■□□□□ 0.68
HERPUD1-201ENST00000300302 SASH1O94885 1247 aa19.27■□□□□ 0.68
HERPUD1-201ENST00000300302 RC3H1Q5TC82 1133 aaKnown RBP19.27■□□□□ 0.68
HERPUD1-201ENST00000300302 ZNF652Q9Y2D9 606 aa19.27■□□□□ 0.68
HERPUD1-201ENST00000300302 TTC41PQ6P2S7 1318 aa19.27■□□□□ 0.68
HERPUD1-201ENST00000300302 CAMTA2O94983 1202 aa19.26■□□□□ 0.67
HERPUD1-201ENST00000300302 TBC1D32Q96NH3 1257 aa19.26■□□□□ 0.67
HERPUD1-201ENST00000300302 TRMT112Q9UI30 125 aaKnown RBP19.26■□□□□ 0.67
HERPUD1-201ENST00000300302 TSHZ3Q63HK5 1081 aa19.26■□□□□ 0.67
HERPUD1-201ENST00000300302 USP42Q9H9J4 1324 aaKnown RBP19.26■□□□□ 0.67
HERPUD1-201ENST00000300302 LY75O60449 1722 aa19.25■□□□□ 0.67
HERPUD1-201ENST00000300302 ERC2O15083 957 aa19.25■□□□□ 0.67
HERPUD1-201ENST00000300302 MSH5O43196 834 aa19.25■□□□□ 0.67
HERPUD1-201ENST00000300302 PARP10Q53GL7 1025 aa19.25■□□□□ 0.67
HERPUD1-201ENST00000300302 AACSQ86V21 672 aa19.25■□□□□ 0.67
HERPUD1-201ENST00000300302 CCDC57Q2TAC2 916 aa19.24■□□□□ 0.67
HERPUD1-201ENST00000300302 C22orf23Q9BZE7 217 aa19.24■□□□□ 0.67
HERPUD1-201ENST00000300302 UBN2Q6ZU65 1347 aa19.24■□□□□ 0.67
HERPUD1-201ENST00000300302 TRIM6-TRIM34B2RNG4 842 aa19.24■□□□□ 0.67
HERPUD1-201ENST00000300302 RGL2O15211 777 aa19.24■□□□□ 0.67
HERPUD1-201ENST00000300302 CLEC4GQ6UXB4 293 aa19.24■□□□□ 0.67
HERPUD1-201ENST00000300302 ECHDC1Q9NTX5 307 aa19.24■□□□□ 0.67
HERPUD1-201ENST00000300302 TUBGCP6Q96RT7 1819 aa19.24■□□□□ 0.67
HERPUD1-201ENST00000300302 GLRX3O76003 335 aaKnown RBP19.23■□□□□ 0.67
HERPUD1-201ENST00000300302 PI4K2BQ8TCG2 481 aa19.23■□□□□ 0.67
HERPUD1-201ENST00000300302 BCORQ6W2J9 1755 aa19.23■□□□□ 0.67
HERPUD1-201ENST00000300302 IRS4O14654 1257 aaPredicted RBP19.22■□□□□ 0.67
HERPUD1-201ENST00000300302 RPS6KA4O75676 772 aa19.22■□□□□ 0.67
HERPUD1-201ENST00000300302 CSF1RP07333 972 aa19.22■□□□□ 0.67
HERPUD1-201ENST00000300302 AK7Q96M32 723 aa19.22■□□□□ 0.67
HERPUD1-201ENST00000300302 HSP90B1P14625 803 aaKnown RBP19.22■□□□□ 0.67
HERPUD1-201ENST00000300302 RILPL2Q969X0 211 aa19.22■□□□□ 0.67
HERPUD1-201ENST00000300302 EAF2Q96CJ1 260 aaPredicted RBP19.22■□□□□ 0.67
HERPUD1-201ENST00000300302 UTP14AQ9BVJ6 771 aaKnown RBP19.22■□□□□ 0.67
HERPUD1-201ENST00000300302 FBXO3Q9UK99 471 aa19.22■□□□□ 0.67
HERPUD1-201ENST00000300302 EP400Q96L91 3159 aa19.22■□□□□ 0.67
HERPUD1-201ENST00000300302 SH3TC1Q8TE82 1336 aa19.21■□□□□ 0.67
HERPUD1-201ENST00000300302 PDE8AO60658 829 aa19.21■□□□□ 0.67
HERPUD1-201ENST00000300302 CIAO1O76071 339 aa19.21■□□□□ 0.67
HERPUD1-201ENST00000300302 IL15P40933 162 aaPredicted RBP19.21■□□□□ 0.67
HERPUD1-201ENST00000300302 IFIT5Q13325 482 aaKnown RBP19.21■□□□□ 0.67
HERPUD1-201ENST00000300302 NIP7Q9Y221 180 aaKnown RBP eCLIP19.21■□□□□ 0.67
HERPUD1-201ENST00000300302 CTSWP56202 376 aa19.2■□□□□ 0.66
HERPUD1-201ENST00000300302 TFCP2Q12800 502 aa19.2■□□□□ 0.66
HERPUD1-201ENST00000300302 RTCBQ9Y3I0 505 aaKnown RBP19.2■□□□□ 0.66
HERPUD1-201ENST00000300302 TAF1LQ8IZX4 1826 aa19.2■□□□□ 0.66
HERPUD1-201ENST00000300302 EYA2O00167 538 aa19.2■□□□□ 0.66
HERPUD1-201ENST00000300302 GNPATO15228 680 aa19.2■□□□□ 0.66
HERPUD1-201ENST00000300302 TAF7LQ5H9L4 462 aa19.2■□□□□ 0.66
HERPUD1-201ENST00000300302 SUSD4Q5VX71 490 aa19.2■□□□□ 0.66
HERPUD1-201ENST00000300302 CNTROBQ8N137 903 aa19.2■□□□□ 0.66
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