RNA–Protein interactions for RNA: ENST00000300227.12

CCDC178-201, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC178, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-201ENST00000300227 MFAP1P55081 439 aaKnown RBP17.05■□□□□ 0.32
CCDC178-201ENST00000300227 FOXO4P98177 505 aa17.05■□□□□ 0.32
CCDC178-201ENST00000300227 NLRP10Q86W26 655 aa17.05■□□□□ 0.32
CCDC178-201ENST00000300227 TRIM28Q13263 835 aaKnown RBP17.05■□□□□ 0.32
CCDC178-201ENST00000300227 TJP1Q07157 1748 aa17.05■□□□□ 0.32
CCDC178-201ENST00000300227 RABL6Q3YEC7 729 aaPredicted RBP17.05■□□□□ 0.32
CCDC178-201ENST00000300227 ERVV-1B6SEH8 477 aa17.04■□□□□ 0.32
CCDC178-201ENST00000300227 ZNF772Q68DY9 489 aaPredicted RBP17.04■□□□□ 0.32
CCDC178-201ENST00000300227 TRMT112Q9UI30 125 aaKnown RBP17.04■□□□□ 0.32
CCDC178-201ENST00000300227 CLASRPQ8N2M8 674 aaKnown RBP17.04■□□□□ 0.32
CCDC178-201ENST00000300227 UPF2Q9HAU5 1272 aaKnown RBP17.03■□□□□ 0.32
CCDC178-201ENST00000300227 TRIM37O94972 964 aa17.03■□□□□ 0.32
CCDC178-201ENST00000300227 SDSP20132 328 aa17.03■□□□□ 0.32
CCDC178-201ENST00000300227 PTPN12Q05209 780 aaKnown RBP17.03■□□□□ 0.32
CCDC178-201ENST00000300227 ZBTB38Q8NAP3 1195 aaPredicted RBP17.03■□□□□ 0.32
CCDC178-201ENST00000300227 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.03■□□□□ 0.32
CCDC178-201ENST00000300227 SASH1O94885 1247 aa17.02■□□□□ 0.32
CCDC178-201ENST00000300227 PCCAP05165 728 aaPredicted RBP17.02■□□□□ 0.32
CCDC178-201ENST00000300227 RBM6P78332 1123 aaKnown RBP17.02■□□□□ 0.32
CCDC178-201ENST00000300227 ERC1Q8IUD2 1116 aa17.02■□□□□ 0.32
CCDC178-201ENST00000300227 CAMTA2O94983 1202 aa17.02■□□□□ 0.32
CCDC178-201ENST00000300227 RFX5P48382 616 aaPredicted RBP17.02■□□□□ 0.32
CCDC178-201ENST00000300227 AFDNP55196 1824 aaKnown RBP17.02■□□□□ 0.31
CCDC178-201ENST00000300227 COL15A1P39059 1388 aa17.02■□□□□ 0.31
CCDC178-201ENST00000300227 UBN2Q6ZU65 1347 aa17.02■□□□□ 0.31
CCDC178-201ENST00000300227 GNPATO15228 680 aa17.02■□□□□ 0.31
CCDC178-201ENST00000300227 FAM196AQ6ZSG2 479 aa17.02■□□□□ 0.31
CCDC178-201ENST00000300227 TBC1D9Q6ZT07 1266 aa17.02■□□□□ 0.31
CCDC178-201ENST00000300227 BCL11BQ9C0K0 894 aaPredicted RBP17.02■□□□□ 0.31
CCDC178-201ENST00000300227 SALL3Q9BXA9 1300 aa17.01■□□□□ 0.31
CCDC178-201ENST00000300227 AACSQ86V21 672 aa17.01■□□□□ 0.31
CCDC178-201ENST00000300227 ZNF594Q96JF6 807 aaPredicted RBP17.01■□□□□ 0.31
CCDC178-201ENST00000300227 NUP188Q5SRE5 1749 aa17.01■□□□□ 0.31
CCDC178-201ENST00000300227 TRIM6-TRIM34B2RNG4 842 aa17.01■□□□□ 0.31
CCDC178-201ENST00000300227 IFIT2P09913 472 aaKnown RBP17.01■□□□□ 0.31
CCDC178-201ENST00000300227 OSBPL3Q9H4L5 887 aa17.01■□□□□ 0.31
CCDC178-201ENST00000300227 COPRSQ9NQ92 184 aa17.01■□□□□ 0.31
CCDC178-201ENST00000300227 CCDC8Q9H0W5 538 aaPredicted RBP17■□□□□ 0.31
CCDC178-201ENST00000300227 NIP7Q9Y221 180 aaKnown RBP eCLIP17■□□□□ 0.31
CCDC178-201ENST00000300227 CDC45O75419 566 aa17■□□□□ 0.31
CCDC178-201ENST00000300227 ZNF34Q8IZ26 560 aa17■□□□□ 0.31
CCDC178-201ENST00000300227 RILPL2Q969X0 211 aa17■□□□□ 0.31
CCDC178-201ENST00000300227 MAP4K4O95819 1239 aaPredicted RBP17■□□□□ 0.31
CCDC178-201ENST00000300227 IRS4O14654 1257 aaPredicted RBP16.99■□□□□ 0.31
CCDC178-201ENST00000300227 SUSD4Q5VX71 490 aa16.99■□□□□ 0.31
CCDC178-201ENST00000300227 BICDL1Q6ZP65 573 aa16.99■□□□□ 0.31
CCDC178-201ENST00000300227 EAF2Q96CJ1 260 aaPredicted RBP16.99■□□□□ 0.31
CCDC178-201ENST00000300227 CNTNAP4Q9C0A0 1308 aa16.98■□□□□ 0.31
CCDC178-201ENST00000300227 PHF14O94880 888 aa16.98■□□□□ 0.31
CCDC178-201ENST00000300227 CCDC57Q2TAC2 916 aa16.98■□□□□ 0.31
CCDC178-201ENST00000300227 STAP2Q9UGK3 403 aa16.98■□□□□ 0.31
CCDC178-201ENST00000300227 MYH14Q7Z406 1995 aaKnown RBP16.98■□□□□ 0.31
CCDC178-201ENST00000300227 TFCP2Q12800 502 aa16.98■□□□□ 0.31
CCDC178-201ENST00000300227 HCLS1P14317 486 aaPredicted RBP16.98■□□□□ 0.31
CCDC178-201ENST00000300227 TAF7LQ5H9L4 462 aa16.98■□□□□ 0.31
CCDC178-201ENST00000300227 SRP68Q9UHB9 627 aaKnown RBP16.98■□□□□ 0.31
CCDC178-201ENST00000300227 AMIGO3Q86WK7 504 aa16.97■□□□□ 0.31
CCDC178-201ENST00000300227 LRRC4BQ9NT99 713 aa16.97■□□□□ 0.31
CCDC178-201ENST00000300227 ZNF652Q9Y2D9 606 aa16.97■□□□□ 0.31
CCDC178-201ENST00000300227 RTCBQ9Y3I0 505 aaKnown RBP16.97■□□□□ 0.31
CCDC178-201ENST00000300227 BTAF1O14981 1849 aa16.97■□□□□ 0.31
CCDC178-201ENST00000300227 RPS6KA4O75676 772 aa16.97■□□□□ 0.31
CCDC178-201ENST00000300227 RXRBP28702 533 aa16.97■□□□□ 0.31
CCDC178-201ENST00000300227 TLR7Q9NYK1 1049 aaKnown RBP16.97■□□□□ 0.31
CCDC178-201ENST00000300227 LRRC24Q50LG9 513 aa16.96■□□□□ 0.31
CCDC178-201ENST00000300227 IPO9Q96P70 1041 aaKnown RBP16.96■□□□□ 0.31
CCDC178-201ENST00000300227 USPL1Q5W0Q7 1092 aa16.96■□□□□ 0.31
CCDC178-201ENST00000300227 UTP14AQ9BVJ6 771 aaKnown RBP16.96■□□□□ 0.31
CCDC178-201ENST00000300227 PUS3Q9BZE2 481 aaKnown RBP16.96■□□□□ 0.31
CCDC178-201ENST00000300227 IFIT5Q13325 482 aaKnown RBP16.95■□□□□ 0.3
CCDC178-201ENST00000300227 RC3H1Q5TC82 1133 aaKnown RBP16.95■□□□□ 0.3
CCDC178-201ENST00000300227 AK7Q96M32 723 aa16.95■□□□□ 0.3
CCDC178-201ENST00000300227 NHSQ6T4R5 1651 aa16.95■□□□□ 0.3
CCDC178-201ENST00000300227 PI4K2BQ8TCG2 481 aa16.95■□□□□ 0.3
CCDC178-201ENST00000300227 GREM2Q9H772 168 aa16.95■□□□□ 0.3
CCDC178-201ENST00000300227 SH3TC1Q8TE82 1336 aa16.95■□□□□ 0.3
CCDC178-201ENST00000300227 CTSWP56202 376 aa16.95■□□□□ 0.3
CCDC178-201ENST00000300227 TTLL11Q8NHH1 800 aa16.95■□□□□ 0.3
CCDC178-201ENST00000300227 C22orf23Q9BZE7 217 aa16.95■□□□□ 0.3
CCDC178-201ENST00000300227 ECHDC1Q9NTX5 307 aa16.95■□□□□ 0.3
CCDC178-201ENST00000300227 CDHR2Q9BYE9 1310 aa16.95■□□□□ 0.3
CCDC178-201ENST00000300227 ZPR1O75312 459 aa16.94■□□□□ 0.3
CCDC178-201ENST00000300227 GPATCH3Q96I76 525 aa16.94■□□□□ 0.3
CCDC178-201ENST00000300227 PLA2G12BQ9BX93 195 aa16.94■□□□□ 0.3
CCDC178-201ENST00000300227 MSH5O43196 834 aa16.94■□□□□ 0.3
CCDC178-201ENST00000300227 PARP10Q53GL7 1025 aa16.94■□□□□ 0.3
CCDC178-201ENST00000300227 CASC1Q6TDU7 716 aa16.94■□□□□ 0.3
CCDC178-201ENST00000300227 TBC1D32Q96NH3 1257 aa16.94■□□□□ 0.3
CCDC178-201ENST00000300227 EYA2O00167 538 aa16.93■□□□□ 0.3
CCDC178-201ENST00000300227 PDE8AO60658 829 aa16.93■□□□□ 0.3
CCDC178-201ENST00000300227 CSF1RP07333 972 aa16.93■□□□□ 0.3
CCDC178-201ENST00000300227 ATG9AQ7Z3C6 839 aa16.93■□□□□ 0.3
CCDC178-201ENST00000300227 ARHGEF1Q92888 912 aaKnown RBP16.93■□□□□ 0.3
CCDC178-201ENST00000300227 ITGA6P23229 1130 aa16.93■□□□□ 0.3
CCDC178-201ENST00000300227 TNNI3KQ59H18 835 aa16.93■□□□□ 0.3
CCDC178-201ENST00000300227 FPGT-TNNI3KV9GXZ4 949 aa16.93■□□□□ 0.3
CCDC178-201ENST00000300227 NEUROD6Q96NK8 337 aa16.93■□□□□ 0.3
CCDC178-201ENST00000300227 ERC2O15083 957 aa16.92■□□□□ 0.3
CCDC178-201ENST00000300227 GLRX3O76003 335 aaKnown RBP16.92■□□□□ 0.3
CCDC178-201ENST00000300227 AOX1Q06278 1338 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms