RNA–Protein interactions for RNA: ENST00000299961.5

HTR3A-201, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 2 BASIC

Gene HTR3A, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-201ENST00000299961 CCDC8Q9H0W5 538 aaPredicted RBP16.55■□□□□ 0.24
HTR3A-201ENST00000299961 SLAIN2Q9P270 581 aa16.55■□□□□ 0.24
HTR3A-201ENST00000299961 IL2RBP14784 551 aa16.54■□□□□ 0.24
HTR3A-201ENST00000299961 EPHA10Q5JZY3 1008 aa16.54■□□□□ 0.24
HTR3A-201ENST00000299961 LIMCH1Q9UPQ0 1083 aa16.54■□□□□ 0.24
HTR3A-201ENST00000299961 CCDC171Q6TFL3 1326 aa16.54■□□□□ 0.24
HTR3A-201ENST00000299961 WDR33Q9C0J8 1336 aaKnown RBP16.54■□□□□ 0.24
HTR3A-201ENST00000299961 NUP188Q5SRE5 1749 aa16.53■□□□□ 0.24
HTR3A-201ENST00000299961 A0A087WZG4 1122 aa16.53■□□□□ 0.24
HTR3A-201ENST00000299961 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
HTR3A-201ENST00000299961 KCPQ6ZWJ8 1503 aa16.53■□□□□ 0.24
HTR3A-201ENST00000299961 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
HTR3A-201ENST00000299961 RFX5P48382 616 aaPredicted RBP16.53■□□□□ 0.24
HTR3A-201ENST00000299961 UBE3BQ7Z3V4 1068 aa16.53■□□□□ 0.24
HTR3A-201ENST00000299961 FSD1Q9BTV5 496 aa16.53■□□□□ 0.24
HTR3A-201ENST00000299961 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.53■□□□□ 0.24
HTR3A-201ENST00000299961 RFX7Q2KHR2 1363 aa16.52■□□□□ 0.24
HTR3A-201ENST00000299961 PRPF40AO75400 957 aaKnown RBP16.52■□□□□ 0.24
HTR3A-201ENST00000299961 MBD3O95983 291 aa16.52■□□□□ 0.24
HTR3A-201ENST00000299961 NCLP19338 710 aaKnown RBP16.52■□□□□ 0.24
HTR3A-201ENST00000299961 ZNF445P59923 1031 aa16.52■□□□□ 0.24
HTR3A-201ENST00000299961 RASEFQ8IZ41 740 aa16.52■□□□□ 0.24
HTR3A-201ENST00000299961 SHANK3Q9BYB0 1731 aa16.52■□□□□ 0.24
HTR3A-201ENST00000299961 CASTP20810 708 aaKnown RBP16.51■□□□□ 0.23
HTR3A-201ENST00000299961 PIP4K2AP48426 406 aaPredicted RBP16.51■□□□□ 0.23
HTR3A-201ENST00000299961 AK2P54819 239 aa16.51■□□□□ 0.23
HTR3A-201ENST00000299961 VPS53Q5VIR6 699 aa16.51■□□□□ 0.23
HTR3A-201ENST00000299961 ZSCAN31Q96LW9 406 aaPredicted RBP16.51■□□□□ 0.23
HTR3A-201ENST00000299961 PANK2Q9BZ23 570 aa16.51■□□□□ 0.23
HTR3A-201ENST00000299961 ATP5JP18859 108 aa16.51■□□□□ 0.23
HTR3A-201ENST00000299961 KCNJ4P48050 445 aa16.51■□□□□ 0.23
HTR3A-201ENST00000299961 PTH1RQ03431 593 aa16.51■□□□□ 0.23
HTR3A-201ENST00000299961 PTPN12Q05209 780 aaKnown RBP16.51■□□□□ 0.23
HTR3A-201ENST00000299961 NMIQ13287 307 aaPredicted RBP16.51■□□□□ 0.23
HTR3A-201ENST00000299961 TNNI3KQ59H18 835 aa16.51■□□□□ 0.23
HTR3A-201ENST00000299961 PRPF40BQ6NWY9 871 aaKnown RBP16.51■□□□□ 0.23
HTR3A-201ENST00000299961 KLHDC4Q8TBB5 520 aa16.51■□□□□ 0.23
HTR3A-201ENST00000299961 BOLA2Q9H3K6 86 aa16.51■□□□□ 0.23
HTR3A-201ENST00000299961 TLR7Q9NYK1 1049 aaKnown RBP16.51■□□□□ 0.23
HTR3A-201ENST00000299961 CYP46A1Q9Y6A2 500 aa16.51■□□□□ 0.23
HTR3A-201ENST00000299961 FPGT-TNNI3KV9GXZ4 949 aa16.51■□□□□ 0.23
HTR3A-201ENST00000299961 NHSL1Q5SYE7 1610 aa16.5■□□□□ 0.23
HTR3A-201ENST00000299961 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
HTR3A-201ENST00000299961 ATP5J2-PTCD1G3V325 749 aa16.5■□□□□ 0.23
HTR3A-201ENST00000299961 PTCD1O75127 700 aaKnown RBP16.5■□□□□ 0.23
HTR3A-201ENST00000299961 CASP7P55210 303 aa16.5■□□□□ 0.23
HTR3A-201ENST00000299961 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
HTR3A-201ENST00000299961 CAVIN1Q6NZI2 390 aaKnown RBP16.5■□□□□ 0.23
HTR3A-201ENST00000299961 GAS2L3Q86XJ1 694 aa16.5■□□□□ 0.23
HTR3A-201ENST00000299961 JAKMIP1Q96N16 626 aaKnown RBP16.5■□□□□ 0.23
HTR3A-201ENST00000299961 SH2B1Q9NRF2 756 aaPredicted RBP16.5■□□□□ 0.23
HTR3A-201ENST00000299961 CWC25Q9NXE8 425 aaPredicted RBP16.5■□□□□ 0.23
HTR3A-201ENST00000299961 PSMA5P28066 241 aa16.49■□□□□ 0.23
HTR3A-201ENST00000299961 EVA1CP58658 441 aa16.49■□□□□ 0.23
HTR3A-201ENST00000299961 NECTIN1Q15223 517 aa16.49■□□□□ 0.23
HTR3A-201ENST00000299961 ZSWIM6Q9HCJ5 1215 aa16.49■□□□□ 0.23
HTR3A-201ENST00000299961 PDRG1Q9NUG6 133 aa16.49■□□□□ 0.23
HTR3A-201ENST00000299961 RBM8AQ9Y5S9 174 aaKnown RBP16.49■□□□□ 0.23
HTR3A-201ENST00000299961 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.49■□□□□ 0.23
HTR3A-201ENST00000299961 H7C1W4 665 aa16.49■□□□□ 0.23
HTR3A-201ENST00000299961 MAP4K1Q92918 833 aa16.49■□□□□ 0.23
HTR3A-201ENST00000299961 MED23Q9ULK4 1368 aa16.49■□□□□ 0.23
HTR3A-201ENST00000299961 NBPF26B4DH59 902 aa16.48■□□□□ 0.23
HTR3A-201ENST00000299961 TFCP2Q12800 502 aa16.48■□□□□ 0.23
HTR3A-201ENST00000299961 ZSCAN23Q3MJ62 389 aa16.48■□□□□ 0.23
HTR3A-201ENST00000299961 NBPF14Q5TI25 921 aa16.48■□□□□ 0.23
HTR3A-201ENST00000299961 CREB3L3Q68CJ9 461 aa16.48■□□□□ 0.23
HTR3A-201ENST00000299961 NBPF10Q6P3W6 841 aaKnown RBP16.48■□□□□ 0.23
HTR3A-201ENST00000299961 RUFY3Q7L099 469 aa16.48■□□□□ 0.23
HTR3A-201ENST00000299961 NBPF15Q8N660 670 aa16.48■□□□□ 0.23
HTR3A-201ENST00000299961 ANP32BQ92688 251 aaKnown RBP16.48■□□□□ 0.23
HTR3A-201ENST00000299961 FAM227BQ96M60 508 aa16.48■□□□□ 0.23
HTR3A-201ENST00000299961 TJP1Q07157 1748 aa16.48■□□□□ 0.23
HTR3A-201ENST00000299961 FOXD4L5Q5VV16 416 aaPredicted RBP16.47■□□□□ 0.23
HTR3A-201ENST00000299961 CCDC191Q8NCU4 936 aa16.47■□□□□ 0.23
HTR3A-201ENST00000299961 FOXD4L4Q8WXT5 416 aaPredicted RBP16.47■□□□□ 0.23
HTR3A-201ENST00000299961 HMG20BQ9P0W2 317 aa16.47■□□□□ 0.23
HTR3A-201ENST00000299961 SMC3Q9UQE7 1217 aa16.47■□□□□ 0.23
HTR3A-201ENST00000299961 GPT2Q8TD30 523 aa16.47■□□□□ 0.23
HTR3A-201ENST00000299961 UBE2Q2Q8WVN8 375 aa16.47■□□□□ 0.23
HTR3A-201ENST00000299961 DBNLQ9UJU6 430 aaKnown RBP16.47■□□□□ 0.23
HTR3A-201ENST00000299961 JCADQ9P266 1359 aa16.47■□□□□ 0.23
HTR3A-201ENST00000299961 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.23
HTR3A-201ENST00000299961 DDX54Q8TDD1 881 aaKnown RBP16.46■□□□□ 0.23
HTR3A-201ENST00000299961 JARID2Q92833 1246 aaPredicted RBP16.46■□□□□ 0.23
HTR3A-201ENST00000299961 SYAP1Q96A49 352 aaPredicted RBP16.46■□□□□ 0.23
HTR3A-201ENST00000299961 RPAP1Q9BWH6 1393 aaPredicted RBP16.46■□□□□ 0.23
HTR3A-201ENST00000299961 STRN4Q9NRL3 753 aa16.46■□□□□ 0.23
HTR3A-201ENST00000299961 A0A0D9SFI3 127 aa16.46■□□□□ 0.22
HTR3A-201ENST00000299961 FOXO4P98177 505 aa16.46■□□□□ 0.22
HTR3A-201ENST00000299961 ANKRD1Q15327 319 aa16.46■□□□□ 0.22
HTR3A-201ENST00000299961 TICAM2Q86XR7 235 aa16.46■□□□□ 0.22
HTR3A-201ENST00000299961 GPR108Q9NPR9 543 aa16.46■□□□□ 0.22
HTR3A-201ENST00000299961 SLC27A2O14975 620 aa16.45■□□□□ 0.22
HTR3A-201ENST00000299961 PDIA4P13667 645 aaKnown RBP16.45■□□□□ 0.22
HTR3A-201ENST00000299961 NASPP49321 788 aaPredicted RBP16.45■□□□□ 0.22
HTR3A-201ENST00000299961 TTLL7Q6ZT98 887 aa16.45■□□□□ 0.22
HTR3A-201ENST00000299961 TEX13AQ9BXU3 409 aaPredicted RBP16.45■□□□□ 0.22
HTR3A-201ENST00000299961 TMOD3Q9NYL9 352 aa16.45■□□□□ 0.22
HTR3A-201ENST00000299961 CHMP3Q9Y3E7 222 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms