RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 FAM182BQ5T319 152 aa31.45■■■□□ 2.63
SDCCAG3-201ENST00000298537 CCDC8Q9H0W5 538 aaPredicted RBP31.45■■■□□ 2.63
SDCCAG3-201ENST00000298537 NBR1Q14596 966 aa31.44■■■□□ 2.62
SDCCAG3-201ENST00000298537 GPTP24298 496 aa31.44■■■□□ 2.62
SDCCAG3-201ENST00000298537 ITPK1Q13572 414 aa31.44■■■□□ 2.62
SDCCAG3-201ENST00000298537 SYNE4Q8N205 404 aa31.44■■■□□ 2.62
SDCCAG3-201ENST00000298537 TBC1D2BQ9UPU7 963 aa31.44■■■□□ 2.62
SDCCAG3-201ENST00000298537 MAP3K15Q6ZN16 1313 aa31.43■■■□□ 2.62
SDCCAG3-201ENST00000298537 ATP6V1AP38606 617 aa31.43■■■□□ 2.62
SDCCAG3-201ENST00000298537 ERC1Q8IUD2 1116 aa31.43■■■□□ 2.62
SDCCAG3-201ENST00000298537 USP26Q9BXU7 913 aa31.43■■■□□ 2.62
SDCCAG3-201ENST00000298537 AOX1Q06278 1338 aa31.43■■■□□ 2.62
SDCCAG3-201ENST00000298537 IL25Q9H293 177 aa31.43■■■□□ 2.62
SDCCAG3-201ENST00000298537 COL15A1P39059 1388 aa31.43■■■□□ 2.62
SDCCAG3-201ENST00000298537 COPRSQ9NQ92 184 aa31.42■■■□□ 2.62
SDCCAG3-201ENST00000298537 LOC102724428A0A0B4J2F2 783 aa31.42■■■□□ 2.62
SDCCAG3-201ENST00000298537 SIK1P57059 783 aa31.42■■■□□ 2.62
SDCCAG3-201ENST00000298537 CHMLP26374 656 aa31.41■■■□□ 2.62
SDCCAG3-201ENST00000298537 BECN1Q14457 450 aa31.41■■■□□ 2.62
SDCCAG3-201ENST00000298537 SPRYD3Q8NCJ5 442 aa31.41■■■□□ 2.62
SDCCAG3-201ENST00000298537 FAM89AQ96GI7 184 aa31.41■■■□□ 2.62
SDCCAG3-201ENST00000298537 IFIT2P09913 472 aaKnown RBP31.41■■■□□ 2.62
SDCCAG3-201ENST00000298537 KCNQ4P56696 695 aa31.41■■■□□ 2.62
SDCCAG3-201ENST00000298537 CASC1Q6TDU7 716 aa31.41■■■□□ 2.62
SDCCAG3-201ENST00000298537 SPATA31A6Q5VVP1 1343 aa31.4■■■□□ 2.62
SDCCAG3-201ENST00000298537 INTS5Q6P9B9 1019 aaKnown RBP31.4■■■□□ 2.62
SDCCAG3-201ENST00000298537 GIGYF2Q6Y7W6 1299 aaKnown RBP31.4■■■□□ 2.62
SDCCAG3-201ENST00000298537 USP42Q9H9J4 1324 aaKnown RBP31.39■■■□□ 2.62
SDCCAG3-201ENST00000298537 PALLDQ8WX93 1383 aa31.39■■■□□ 2.62
SDCCAG3-201ENST00000298537 CD2BP2O95400 341 aaKnown RBP31.38■■■□□ 2.61
SDCCAG3-201ENST00000298537 ZNF594Q96JF6 807 aaPredicted RBP31.38■■■□□ 2.61
SDCCAG3-201ENST00000298537 CCDC85AQ96PX6 553 aaPredicted RBP31.38■■■□□ 2.61
SDCCAG3-201ENST00000298537 TFCP2Q12800 502 aa31.38■■■□□ 2.61
SDCCAG3-201ENST00000298537 ERC2O15083 957 aa31.37■■■□□ 2.61
SDCCAG3-201ENST00000298537 CRKLP46109 303 aaKnown RBP31.37■■■□□ 2.61
SDCCAG3-201ENST00000298537 ESYT1Q9BSJ8 1104 aa31.37■■■□□ 2.61
SDCCAG3-201ENST00000298537 SLKQ9H2G2 1235 aaPredicted RBP31.37■■■□□ 2.61
SDCCAG3-201ENST00000298537 ECHDC1Q9NTX5 307 aa31.37■■■□□ 2.61
SDCCAG3-201ENST00000298537 DZIP3Q86Y13 1208 aaKnown RBP31.36■■■□□ 2.61
SDCCAG3-201ENST00000298537 IL6STP40189 918 aaPredicted RBP31.35■■■□□ 2.61
SDCCAG3-201ENST00000298537 TTC41PQ6P2S7 1318 aa31.35■■■□□ 2.61
SDCCAG3-201ENST00000298537 MEX3CQ5U5Q3 659 aaKnown RBP31.35■■■□□ 2.61
SDCCAG3-201ENST00000298537 TRIM28Q13263 835 aaKnown RBP31.34■■■□□ 2.61
SDCCAG3-201ENST00000298537 NLRP10Q86W26 655 aa31.34■■■□□ 2.61
SDCCAG3-201ENST00000298537 CCDC87Q9NVE4 849 aa31.33■■■□□ 2.61
SDCCAG3-201ENST00000298537 EIF5P55010 431 aaKnown RBP31.33■■■□□ 2.61
SDCCAG3-201ENST00000298537 GLRX3O76003 335 aaKnown RBP31.32■■■□□ 2.6
SDCCAG3-201ENST00000298537 LRRC24Q50LG9 513 aa31.32■■■□□ 2.6
SDCCAG3-201ENST00000298537 ATG9AQ7Z3C6 839 aa31.32■■■□□ 2.6
SDCCAG3-201ENST00000298537 MYH14Q7Z406 1995 aaKnown RBP31.32■■■□□ 2.6
SDCCAG3-201ENST00000298537 PUS3Q9BZE2 481 aaKnown RBP31.31■■■□□ 2.6
SDCCAG3-201ENST00000298537 UBN2Q6ZU65 1347 aa31.3■■■□□ 2.6
SDCCAG3-201ENST00000298537 PCCAP05165 728 aaPredicted RBP31.3■■■□□ 2.6
SDCCAG3-201ENST00000298537 SMIM5Q71RC9 77 aa31.3■■■□□ 2.6
SDCCAG3-201ENST00000298537 AFF2P51816 1311 aa31.3■■■□□ 2.6
SDCCAG3-201ENST00000298537 REC8O95072 547 aa31.3■■■□□ 2.6
SDCCAG3-201ENST00000298537 TNNI3KQ59H18 835 aa31.3■■■□□ 2.6
SDCCAG3-201ENST00000298537 ZBTB38Q8NAP3 1195 aaPredicted RBP31.3■■■□□ 2.6
SDCCAG3-201ENST00000298537 DBNLQ9UJU6 430 aaKnown RBP31.3■■■□□ 2.6
SDCCAG3-201ENST00000298537 FPGT-TNNI3KV9GXZ4 949 aa31.3■■■□□ 2.6
SDCCAG3-201ENST00000298537 CNTROBQ8N137 903 aa31.29■■■□□ 2.6
SDCCAG3-201ENST00000298537 BOLA2Q9H3K6 86 aa31.29■■■□□ 2.6
SDCCAG3-201ENST00000298537 ANO2Q9NQ90 1003 aa31.28■■■□□ 2.6
SDCCAG3-201ENST00000298537 AK9Q5TCS8 1911 aa31.28■■■□□ 2.6
SDCCAG3-201ENST00000298537 NDUFB9Q9Y6M9 179 aa31.27■■■□□ 2.6
SDCCAG3-201ENST00000298537 NUP98P52948 1817 aa31.27■■■□□ 2.6
SDCCAG3-201ENST00000298537 LINC00116Q8NCU8 138 aa31.26■■■□□ 2.6
SDCCAG3-201ENST00000298537 GPATCH3Q96I76 525 aa31.26■■■□□ 2.6
SDCCAG3-201ENST00000298537 GJD4Q96KN9 370 aaPredicted RBP31.26■■■□□ 2.6
SDCCAG3-201ENST00000298537 EP400Q96L91 3159 aa31.26■■■□□ 2.6
SDCCAG3-201ENST00000298537 HSCBQ8IWL3 235 aa31.26■■■□□ 2.59
SDCCAG3-201ENST00000298537 EDC3Q96F86 508 aaKnown RBP31.26■■■□□ 2.59
SDCCAG3-201ENST00000298537 DBNDD2Q9BQY9 259 aa31.26■■■□□ 2.59
SDCCAG3-201ENST00000298537 FAM177BA6PVY3 158 aa31.25■■■□□ 2.59
SDCCAG3-201ENST00000298537 CWC27Q6UX04 472 aaKnown RBP31.25■■■□□ 2.59
SDCCAG3-201ENST00000298537 ERVV-1B6SEH8 477 aa31.24■■■□□ 2.59
SDCCAG3-201ENST00000298537 ANTXR1Q9H6X2 564 aa31.24■■■□□ 2.59
SDCCAG3-201ENST00000298537 TRMT112Q9UI30 125 aaKnown RBP31.24■■■□□ 2.59
SDCCAG3-201ENST00000298537 PALD1Q9ULE6 856 aa31.24■■■□□ 2.59
SDCCAG3-201ENST00000298537 THSD7AQ9UPZ6 1657 aa31.24■■■□□ 2.59
SDCCAG3-201ENST00000298537 SNX21Q969T3 373 aa31.24■■■□□ 2.59
SDCCAG3-201ENST00000298537 HSP90AB3PQ58FF7 597 aa31.23■■■□□ 2.59
SDCCAG3-201ENST00000298537 ZNF34Q8IZ26 560 aa31.23■■■□□ 2.59
SDCCAG3-201ENST00000298537 SMARCC1Q92922 1105 aaPredicted RBP31.23■■■□□ 2.59
SDCCAG3-201ENST00000298537 TIMM10P62072 90 aa31.22■■■□□ 2.59
SDCCAG3-201ENST00000298537 EYA2O00167 538 aa31.21■■■□□ 2.59
SDCCAG3-201ENST00000298537 CAMTA2O94983 1202 aa31.21■■■□□ 2.59
SDCCAG3-201ENST00000298537 ANKRD36CQ5JPF3 1778 aa31.21■■■□□ 2.59
SDCCAG3-201ENST00000298537 PLA2G12BQ9BX93 195 aa31.21■■■□□ 2.59
SDCCAG3-201ENST00000298537 SGSM2O43147 1006 aa31.2■■■□□ 2.59
SDCCAG3-201ENST00000298537 CSF1RP07333 972 aa31.2■■■□□ 2.59
SDCCAG3-201ENST00000298537 CCDC57Q2TAC2 916 aa31.2■■■□□ 2.59
SDCCAG3-201ENST00000298537 IRS4O14654 1257 aaPredicted RBP31.2■■■□□ 2.58
SDCCAG3-201ENST00000298537 GREM2Q9H772 168 aa31.2■■■□□ 2.58
SDCCAG3-201ENST00000298537 SUSD4Q5VX71 490 aa31.19■■■□□ 2.58
SDCCAG3-201ENST00000298537 TTLL11Q8NHH1 800 aa31.19■■■□□ 2.58
SDCCAG3-201ENST00000298537 CDHR2Q9BYE9 1310 aa31.18■■■□□ 2.58
SDCCAG3-201ENST00000298537 EIF5BO60841 1220 aaKnown RBP31.18■■■□□ 2.58
SDCCAG3-201ENST00000298537 NEUROD6Q96NK8 337 aa31.18■■■□□ 2.58
SDCCAG3-201ENST00000298537 RREB1Q92766 1687 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms