RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 NECAB1Q8N987 351 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 KCNH5Q8NCM2 988 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 N4BP3O15049 544 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 POTEJP0CG39 1038 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 SPAG1Q07617 926 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 MCM6Q14566 821 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 IQCA1Q86XH1 822 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 NME9Q86XW9 330 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 FAM135AQ9P2D6 1515 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 SYT1P21579 422 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 MAP3K12Q12852 859 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 AOPEPQ8N6M6 819 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 PIBF1Q8WXW3 757 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 GOLIM4O00461 696 aa12.67□□□□□ -0.38
PBRM1-201ENST00000296302 PTGS1P23219 599 aa12.67□□□□□ -0.38
PBRM1-201ENST00000296302 IGHMBP2P38935 993 aaKnown RBP12.67□□□□□ -0.38
PBRM1-201ENST00000296302 GOPCQ9HD26 462 aa12.67□□□□□ -0.38
PBRM1-201ENST00000296302 TTC21BQ7Z4L5 1316 aa12.67□□□□□ -0.38
PBRM1-201ENST00000296302 ADGRF5Q8IZF2 1346 aa12.67□□□□□ -0.38
PBRM1-201ENST00000296302 SEC24BO95487 1268 aa12.67□□□□□ -0.38
PBRM1-201ENST00000296302 CAPN2P17655 700 aa12.67□□□□□ -0.38
PBRM1-201ENST00000296302 ARHGEF11O15085 1522 aa12.67□□□□□ -0.38
PBRM1-201ENST00000296302 LIG1P18858 919 aa12.67□□□□□ -0.38
PBRM1-201ENST00000296302 PIP4K2BP78356 416 aa12.67□□□□□ -0.38
PBRM1-201ENST00000296302 SEC63Q9UGP8 760 aaKnown RBP12.67□□□□□ -0.38
PBRM1-201ENST00000296302 OPA1O60313 960 aa12.67□□□□□ -0.38
PBRM1-201ENST00000296302 AMPD3Q01432 767 aa12.67□□□□□ -0.38
PBRM1-201ENST00000296302 BRF1Q92994 677 aa12.67□□□□□ -0.38
PBRM1-201ENST00000296302 HMGXB3Q12766 1538 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 POLR3AO14802 1390 aaPredicted RBP12.66□□□□□ -0.38
PBRM1-201ENST00000296302 CCDC194A0A1B0GVG4 234 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 HSPA4P34932 840 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 TMEM266Q2M3C6 531 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 THEMISQ8N1K5 641 aaPredicted RBP12.66□□□□□ -0.38
PBRM1-201ENST00000296302 MRPL50Q8N5N7 158 aaKnown RBP12.66□□□□□ -0.38
PBRM1-201ENST00000296302 NCOA7Q8NI08 942 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 GSTTP1A0A1W2PQM5 241 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 CYLC1P35663 651 aaPredicted RBP12.66□□□□□ -0.38
PBRM1-201ENST00000296302 DNA2P51530 1060 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 MEIS3Q99687 375 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 DCTPP1Q9H773 170 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 V9GYY5 206 aaPredicted RBP12.66□□□□□ -0.38
PBRM1-201ENST00000296302 DNMBPQ6XZF7 1577 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 ABCA10Q8WWZ4 1543 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 ISM2Q6H9L7 571 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 RMND1Q9NWS8 449 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 IQGAP2Q13576 1575 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 MINDY4BA8MYZ0 360 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 NF2P35240 595 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 METAP2P50579 478 aaKnown RBP eCLIP12.66□□□□□ -0.38
PBRM1-201ENST00000296302 ZNF445P59923 1031 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 ERO1AQ96HE7 468 aa12.66□□□□□ -0.38
PBRM1-201ENST00000296302 BMP15O95972 392 aa12.65□□□□□ -0.38
PBRM1-201ENST00000296302 WWC2Q6AWC2 1192 aa12.65□□□□□ -0.38
PBRM1-201ENST00000296302 RBSNQ9H1K0 784 aa12.65□□□□□ -0.38
PBRM1-201ENST00000296302 ABCF2Q9UG63 623 aa12.65□□□□□ -0.38
PBRM1-201ENST00000296302 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.65□□□□□ -0.38
PBRM1-201ENST00000296302 RBM8AQ9Y5S9 174 aaKnown RBP12.65□□□□□ -0.38
PBRM1-201ENST00000296302 A0A087WZG4 1122 aa12.65□□□□□ -0.38
PBRM1-201ENST00000296302 DESP17661 470 aa12.65□□□□□ -0.38
PBRM1-201ENST00000296302 NLRP5P59047 1200 aa12.65□□□□□ -0.38
PBRM1-201ENST00000296302 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.65□□□□□ -0.38
PBRM1-201ENST00000296302 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.65□□□□□ -0.38
PBRM1-201ENST00000296302 ZBTB40Q9NUA8 1239 aa12.65□□□□□ -0.38
PBRM1-201ENST00000296302 CTAGE9A4FU28 777 aa12.65□□□□□ -0.38
PBRM1-201ENST00000296302 ZNF76P36508 570 aa12.65□□□□□ -0.38
PBRM1-201ENST00000296302 ZGPATQ8N5A5 531 aaKnown RBP12.65□□□□□ -0.38
PBRM1-201ENST00000296302 IFI16Q16666 785 aaKnown RBP12.65□□□□□ -0.39
PBRM1-201ENST00000296302 CATIPQ7Z7H3 387 aa12.65□□□□□ -0.39
PBRM1-201ENST00000296302 CCDC82Q8N4S0 544 aa12.65□□□□□ -0.39
PBRM1-201ENST00000296302 MYRIPQ8NFW9 859 aa12.65□□□□□ -0.39
PBRM1-201ENST00000296302 SPINK5Q9NQ38 1064 aaPredicted RBP12.65□□□□□ -0.39
PBRM1-201ENST00000296302 NUP160Q12769 1436 aa12.64□□□□□ -0.39
PBRM1-201ENST00000296302 SSR1P43307 286 aaKnown RBP12.64□□□□□ -0.39
PBRM1-201ENST00000296302 TOM1L2Q6ZVM7 507 aa12.64□□□□□ -0.39
PBRM1-201ENST00000296302 TCP11L1Q9NUJ3 509 aa12.64□□□□□ -0.39
PBRM1-201ENST00000296302 EBAG9O00559 213 aa12.64□□□□□ -0.39
PBRM1-201ENST00000296302 RLBP1P12271 317 aa12.64□□□□□ -0.39
PBRM1-201ENST00000296302 ATP8B2P98198 1209 aa12.64□□□□□ -0.39
PBRM1-201ENST00000296302 USP26Q9BXU7 913 aa12.64□□□□□ -0.39
PBRM1-201ENST00000296302 AKR1B10O60218 316 aa12.64□□□□□ -0.39
PBRM1-201ENST00000296302 GABPB1Q06547 395 aaPredicted RBP12.64□□□□□ -0.39
PBRM1-201ENST00000296302 IFIT5Q13325 482 aaKnown RBP12.64□□□□□ -0.39
PBRM1-201ENST00000296302 TMEM67Q5HYA8 995 aa12.64□□□□□ -0.39
PBRM1-201ENST00000296302 NBPF11Q86T75 865 aa12.64□□□□□ -0.39
PBRM1-201ENST00000296302 CCDC85AQ96PX6 553 aaPredicted RBP12.64□□□□□ -0.39
PBRM1-201ENST00000296302 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
PBRM1-201ENST00000296302 TMCO5BA8MYB1 307 aa12.64□□□□□ -0.39
PBRM1-201ENST00000296302 TTF1Q15361 905 aaPredicted RBP12.64□□□□□ -0.39
PBRM1-201ENST00000296302 PIK3C2GO75747 1445 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 TTC31Q49AM3 519 aaPredicted RBP12.63□□□□□ -0.39
PBRM1-201ENST00000296302 ANKRD24Q8TF21 1146 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 CNKSR2Q8WXI2 1034 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 CUL7Q14999 1698 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 MATR3P43243 847 aaKnown RBP eCLIP12.63□□□□□ -0.39
PBRM1-201ENST00000296302 USP5P45974 858 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 PROSER2Q86WR7 435 aaPredicted RBP12.63□□□□□ -0.39
PBRM1-201ENST00000296302 STARD3NLO95772 234 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 UBA7P41226 1012 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 ZFP91Q96JP5 570 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms