RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 DDR1Q08345 913 aa35.07■■■■□ 3.21
CHCHD4-201ENST00000295767 SUSD4Q5VX71 490 aa35.06■■■■□ 3.2
CHCHD4-201ENST00000295767 MTFR1LQ9H019 292 aa35.06■■■■□ 3.2
CHCHD4-201ENST00000295767 NRXN2Q9P2S2 1712 aa35.06■■■■□ 3.2
CHCHD4-201ENST00000295767 MMP10P09238 476 aa35.06■■■■□ 3.2
CHCHD4-201ENST00000295767 GCKRQ14397 625 aa35.06■■■■□ 3.2
CHCHD4-201ENST00000295767 ITPRIPQ8IWB1 547 aa35.06■■■■□ 3.2
CHCHD4-201ENST00000295767 FAM177BA6PVY3 158 aa35.05■■■■□ 3.2
CHCHD4-201ENST00000295767 COG6Q9Y2V7 657 aa35.05■■■■□ 3.2
CHCHD4-201ENST00000295767 POLRMTO00411 1230 aaKnown RBP35.04■■■■□ 3.2
CHCHD4-201ENST00000295767 ATF5Q9Y2D1 282 aaPredicted RBP35.03■■■■□ 3.2
CHCHD4-201ENST00000295767 IBTKQ9P2D0 1353 aaPredicted RBP35.03■■■■□ 3.2
CHCHD4-201ENST00000295767 MVPQ14764 893 aaKnown RBP35.03■■■■□ 3.2
CHCHD4-201ENST00000295767 NTSR2O95665 410 aa35.02■■■■□ 3.2
CHCHD4-201ENST00000295767 PPP1R42Q7Z4L9 355 aa35.02■■■■□ 3.2
CHCHD4-201ENST00000295767 SERPINB2P05120 415 aa35.01■■■■□ 3.19
CHCHD4-201ENST00000295767 UTP14AQ9BVJ6 771 aaKnown RBP35.01■■■■□ 3.19
CHCHD4-201ENST00000295767 NBPF5PQ86XG9 351 aaPredicted RBP35■■■■□ 3.19
CHCHD4-201ENST00000295767 TRMT112Q9UI30 125 aaKnown RBP35■■■■□ 3.19
CHCHD4-201ENST00000295767 PARP3Q9Y6F1 533 aa35■■■■□ 3.19
CHCHD4-201ENST00000295767 LAMB2P55268 1798 aa35■■■■□ 3.19
CHCHD4-201ENST00000295767 DDX60Q8IY21 1712 aaKnown RBP34.99■■■■□ 3.19
CHCHD4-201ENST00000295767 GRM8O00222 908 aa34.99■■■■□ 3.19
CHCHD4-201ENST00000295767 JARID2Q92833 1246 aaPredicted RBP34.99■■■■□ 3.19
CHCHD4-201ENST00000295767 USP44Q9H0E7 712 aa34.99■■■■□ 3.19
CHCHD4-201ENST00000295767 RTL5Q5HYW3 569 aaPredicted RBP34.98■■■■□ 3.19
CHCHD4-201ENST00000295767 NYXQ9GZU5 481 aa34.98■■■■□ 3.19
CHCHD4-201ENST00000295767 C9orf78Q9NZ63 289 aaPredicted RBP34.98■■■■□ 3.19
CHCHD4-201ENST00000295767 PCCAP05165 728 aaPredicted RBP34.97■■■■□ 3.19
CHCHD4-201ENST00000295767 NUTM1Q86Y26 1132 aa34.97■■■■□ 3.19
CHCHD4-201ENST00000295767 ZBTB38Q8NAP3 1195 aaPredicted RBP34.97■■■■□ 3.19
CHCHD4-201ENST00000295767 FAM89AQ96GI7 184 aa34.97■■■■□ 3.19
CHCHD4-201ENST00000295767 H7C1W4 665 aa34.96■■■■□ 3.19
CHCHD4-201ENST00000295767 IRX6P78412 446 aaPredicted RBP34.96■■■■□ 3.19
CHCHD4-201ENST00000295767 UBE3BQ7Z3V4 1068 aa34.96■■■■□ 3.19
CHCHD4-201ENST00000295767 SYNE4Q8N205 404 aa34.96■■■■□ 3.19
CHCHD4-201ENST00000295767 MEIS3Q99687 375 aa34.96■■■■□ 3.19
CHCHD4-201ENST00000295767 NBPF7P0C2Y1 421 aaPredicted RBP34.95■■■■□ 3.19
CHCHD4-201ENST00000295767 TPTE2Q6XPS3 522 aa34.95■■■■□ 3.19
CHCHD4-201ENST00000295767 CRBNQ96SW2 442 aa34.95■■■■□ 3.19
CHCHD4-201ENST00000295767 DDX19BQ9UMR2 479 aa34.95■■■■□ 3.19
CHCHD4-201ENST00000295767 MYH3P11055 1940 aa34.95■■■■□ 3.19
CHCHD4-201ENST00000295767 UTYO14607 1347 aa34.95■■■■□ 3.19
CHCHD4-201ENST00000295767 CNBD1Q8NA66 436 aa34.95■■■■□ 3.18
CHCHD4-201ENST00000295767 SH3TC1Q8TE82 1336 aa34.94■■■■□ 3.18
CHCHD4-201ENST00000295767 ANKRD31Q8N7Z5 1873 aa34.94■■■■□ 3.18
CHCHD4-201ENST00000295767 CASP7P55210 303 aa34.94■■■■□ 3.18
CHCHD4-201ENST00000295767 PRR5LQ6MZQ0 368 aa34.94■■■■□ 3.18
CHCHD4-201ENST00000295767 SGIP1Q9BQI5 828 aa34.94■■■■□ 3.18
CHCHD4-201ENST00000295767 ZBTB7BO15156 539 aaPredicted RBP34.93■■■■□ 3.18
CHCHD4-201ENST00000295767 NPHP1O15259 732 aa34.93■■■■□ 3.18
CHCHD4-201ENST00000295767 ERFEQ4G0M1 354 aa34.93■■■■□ 3.18
CHCHD4-201ENST00000295767 ABCC12Q96J65 1359 aa34.93■■■■□ 3.18
CHCHD4-201ENST00000295767 POLD1P28340 1107 aa34.92■■■■□ 3.18
CHCHD4-201ENST00000295767 GTF2E1P29083 439 aaPredicted RBP34.92■■■■□ 3.18
CHCHD4-201ENST00000295767 CCDC24Q8N4L8 307 aa34.92■■■■□ 3.18
CHCHD4-201ENST00000295767 TNRC6CQ9HCJ0 1690 aaKnown RBP34.92■■■■□ 3.18
CHCHD4-201ENST00000295767 PTGER2P43116 358 aa34.91■■■■□ 3.18
CHCHD4-201ENST00000295767 CDHR2Q9BYE9 1310 aa34.9■■■■□ 3.18
CHCHD4-201ENST00000295767 SPON1Q9HCB6 807 aa34.9■■■■□ 3.18
CHCHD4-201ENST00000295767 UBTFL1P0CB47 393 aaPredicted RBP34.89■■■■□ 3.18
CHCHD4-201ENST00000295767 IRS4O14654 1257 aaPredicted RBP34.88■■■■□ 3.17
CHCHD4-201ENST00000295767 GNAI3P08754 354 aa34.88■■■■□ 3.17
CHCHD4-201ENST00000295767 KIF13BQ9NQT8 1826 aa34.87■■■■□ 3.17
CHCHD4-201ENST00000295767 ST5P78524 1137 aa34.87■■■■□ 3.17
CHCHD4-201ENST00000295767 HCLS1P14317 486 aaPredicted RBP34.86■■■■□ 3.17
CHCHD4-201ENST00000295767 SUCLG2Q96I99 432 aa34.86■■■■□ 3.17
CHCHD4-201ENST00000295767 RIC1Q4ADV7 1423 aa34.86■■■■□ 3.17
CHCHD4-201ENST00000295767 SLC10A5Q5PT55 438 aa34.84■■■■□ 3.17
CHCHD4-201ENST00000295767 EXOC6Q8TAG9 804 aa34.84■■■■□ 3.17
CHCHD4-201ENST00000295767 KAZALD1Q96I82 304 aa34.84■■■■□ 3.17
CHCHD4-201ENST00000295767 ZBTB40Q9NUA8 1239 aa34.84■■■■□ 3.17
CHCHD4-201ENST00000295767 C10orf71Q711Q0 1435 aa34.83■■■■□ 3.17
CHCHD4-201ENST00000295767 CHMP4BQ9H444 224 aaKnown RBP34.83■■■■□ 3.17
CHCHD4-201ENST00000295767 LRRFIP2Q9Y608 721 aaKnown RBP34.83■■■■□ 3.17
CHCHD4-201ENST00000295767 PLA2G12BQ9BX93 195 aa34.82■■■■□ 3.16
CHCHD4-201ENST00000295767 C1orf115Q9H7X2 142 aa34.81■■■■□ 3.16
CHCHD4-201ENST00000295767 PDE8AO60658 829 aa34.81■■■■□ 3.16
CHCHD4-201ENST00000295767 EPHA10Q5JZY3 1008 aa34.81■■■■□ 3.16
CHCHD4-201ENST00000295767 COL11A2P13942 1736 aaPredicted RBP34.8■■■■□ 3.16
CHCHD4-201ENST00000295767 GNAI2P04899 355 aa34.8■■■■□ 3.16
CHCHD4-201ENST00000295767 HSP90B1P14625 803 aaKnown RBP34.79■■■■□ 3.16
CHCHD4-201ENST00000295767 FOXO4P98177 505 aa34.79■■■■□ 3.16
CHCHD4-201ENST00000295767 C3orf67Q6ZVT6 689 aa34.79■■■■□ 3.16
CHCHD4-201ENST00000295767 BICC1Q9H694 974 aaKnown RBP34.79■■■■□ 3.16
CHCHD4-201ENST00000295767 HDAC5Q9UQL6 1122 aa34.79■■■■□ 3.16
CHCHD4-201ENST00000295767 NEFLP07196 543 aa34.78■■■■□ 3.16
CHCHD4-201ENST00000295767 BRIP1Q9BX63 1249 aa34.78■■■■□ 3.16
CHCHD4-201ENST00000295767 CTSWP56202 376 aa34.77■■■■□ 3.16
CHCHD4-201ENST00000295767 NLRP3Q96P20 1036 aa34.77■■■■□ 3.16
CHCHD4-201ENST00000295767 KIAA1551Q9HCM1 1747 aa34.76■■■■□ 3.16
CHCHD4-201ENST00000295767 ANKRD44Q8N8A2 993 aa34.76■■■■□ 3.15
CHCHD4-201ENST00000295767 TAF1P21675 1872 aa34.74■■■■□ 3.15
CHCHD4-201ENST00000295767 RABL6Q3YEC7 729 aaPredicted RBP34.73■■■■□ 3.15
CHCHD4-201ENST00000295767 TTLL11Q8NHH1 800 aa34.73■■■■□ 3.15
CHCHD4-201ENST00000295767 DLEC1Q9Y238 1755 aa34.73■■■■□ 3.15
CHCHD4-201ENST00000295767 LRP5O75197 1615 aa34.73■■■■□ 3.15
CHCHD4-201ENST00000295767 LMBR1LQ6UX01 489 aa34.73■■■■□ 3.15
CHCHD4-201ENST00000295767 KLRG2A4D1S0 409 aaPredicted RBP34.72■■■■□ 3.15
CHCHD4-201ENST00000295767 PDE6BP35913 854 aa34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms