RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 TMEM63CQ9P1W3 806 aa18.18■□□□□ 0.5
CCDC116-201ENST00000292779 TCHHQ07283 1943 aa18.17■□□□□ 0.5
CCDC116-201ENST00000292779 PTH1RQ03431 593 aa18.17■□□□□ 0.5
CCDC116-201ENST00000292779 CCDC173Q0VFZ6 552 aa18.17■□□□□ 0.5
CCDC116-201ENST00000292779 G3BP1Q13283 466 aaKnown RBP eCLIP18.17■□□□□ 0.5
CCDC116-201ENST00000292779 COPS6Q7L5N1 327 aa18.17■□□□□ 0.5
CCDC116-201ENST00000292779 CARD10Q9BWT7 1032 aa18.17■□□□□ 0.5
CCDC116-201ENST00000292779 ERBB4Q15303 1308 aa18.17■□□□□ 0.5
CCDC116-201ENST00000292779 ESPNB1AK53 854 aa18.16■□□□□ 0.5
CCDC116-201ENST00000292779 PRIM1P49642 420 aaKnown RBP18.16■□□□□ 0.5
CCDC116-201ENST00000292779 EAF2Q96CJ1 260 aaPredicted RBP18.16■□□□□ 0.5
CCDC116-201ENST00000292779 EVI5LQ96CN4 794 aa18.16■□□□□ 0.5
CCDC116-201ENST00000292779 DCAF5Q96JK2 942 aa18.16■□□□□ 0.5
CCDC116-201ENST00000292779 USP16Q9Y5T5 823 aa18.16■□□□□ 0.5
CCDC116-201ENST00000292779 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
CCDC116-201ENST00000292779 PPP1R9BQ96SB3 815 aa18.16■□□□□ 0.5
CCDC116-201ENST00000292779 LARP6Q9BRS8 491 aaKnown RBP18.16■□□□□ 0.5
CCDC116-201ENST00000292779 RBSNQ9H1K0 784 aa18.16■□□□□ 0.5
CCDC116-201ENST00000292779 NEURL1BA8MQ27 555 aa18.15■□□□□ 0.5
CCDC116-201ENST00000292779 RUFY3Q7L099 469 aa18.15■□□□□ 0.5
CCDC116-201ENST00000292779 TTC5Q8N0Z6 440 aa18.15■□□□□ 0.5
CCDC116-201ENST00000292779 ANP32BQ92688 251 aaKnown RBP18.15■□□□□ 0.5
CCDC116-201ENST00000292779 SIL1Q9H173 461 aa18.15■□□□□ 0.5
CCDC116-201ENST00000292779 LRP6O75581 1613 aa18.15■□□□□ 0.5
CCDC116-201ENST00000292779 PARP4Q9UKK3 1724 aaKnown RBP18.15■□□□□ 0.5
CCDC116-201ENST00000292779 WDR33Q9C0J8 1336 aaKnown RBP18.15■□□□□ 0.5
CCDC116-201ENST00000292779 MBD3O95983 291 aa18.15■□□□□ 0.5
CCDC116-201ENST00000292779 CPA1P15085 419 aa18.15■□□□□ 0.5
CCDC116-201ENST00000292779 CASTP20810 708 aaKnown RBP18.15■□□□□ 0.5
CCDC116-201ENST00000292779 NEXNQ0ZGT2 675 aa18.15■□□□□ 0.5
CCDC116-201ENST00000292779 CCDC8Q9H0W5 538 aaPredicted RBP18.15■□□□□ 0.5
CCDC116-201ENST00000292779 LIMCH1Q9UPQ0 1083 aa18.15■□□□□ 0.5
CCDC116-201ENST00000292779 RPAP1Q9BWH6 1393 aaPredicted RBP18.14■□□□□ 0.49
CCDC116-201ENST00000292779 SNRPA1P09661 255 aaKnown RBP18.14■□□□□ 0.49
CCDC116-201ENST00000292779 FOXD4L6Q3SYB3 417 aaPredicted RBP18.14■□□□□ 0.49
CCDC116-201ENST00000292779 FOXD4L3Q6VB84 417 aaPredicted RBP18.14■□□□□ 0.49
CCDC116-201ENST00000292779 MYD88Q99836 296 aa18.14■□□□□ 0.49
CCDC116-201ENST00000292779 GCKRQ14397 625 aa18.14■□□□□ 0.49
CCDC116-201ENST00000292779 PRPF40BQ6NWY9 871 aaKnown RBP18.14■□□□□ 0.49
CCDC116-201ENST00000292779 LRP10Q7Z4F1 713 aa18.14■□□□□ 0.49
CCDC116-201ENST00000292779 KLHDC4Q8TBB5 520 aa18.14■□□□□ 0.49
CCDC116-201ENST00000292779 METTL22Q9BUU2 404 aaPredicted RBP18.14■□□□□ 0.49
CCDC116-201ENST00000292779 TLR7Q9NYK1 1049 aaKnown RBP18.14■□□□□ 0.49
CCDC116-201ENST00000292779 SYCE3A1L190 88 aa18.13■□□□□ 0.49
CCDC116-201ENST00000292779 ADCK5Q3MIX3 580 aa18.12■□□□□ 0.49
CCDC116-201ENST00000292779 EPHA10Q5JZY3 1008 aa18.12■□□□□ 0.49
CCDC116-201ENST00000292779 ANKRD13DQ6ZTN6 518 aa18.12■□□□□ 0.49
CCDC116-201ENST00000292779 JCADQ9P266 1359 aa18.12■□□□□ 0.49
CCDC116-201ENST00000292779 LRSAM1Q6UWE0 723 aa18.12■□□□□ 0.49
CCDC116-201ENST00000292779 JAKMIP1Q96N16 626 aaKnown RBP18.12■□□□□ 0.49
CCDC116-201ENST00000292779 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
CCDC116-201ENST00000292779 MRC1P22897 1456 aa18.12■□□□□ 0.49
CCDC116-201ENST00000292779 AFDNP55196 1824 aaKnown RBP18.12■□□□□ 0.49
CCDC116-201ENST00000292779 CCDC171Q6TFL3 1326 aa18.11■□□□□ 0.49
CCDC116-201ENST00000292779 CABP4P57796 275 aa18.11■□□□□ 0.49
CCDC116-201ENST00000292779 FAM227BQ96M60 508 aa18.11■□□□□ 0.49
CCDC116-201ENST00000292779 GDPD2Q9HCC8 539 aa18.11■□□□□ 0.49
CCDC116-201ENST00000292779 LARGE1O95461 756 aa18.11■□□□□ 0.49
CCDC116-201ENST00000292779 IL2RBP14784 551 aa18.11■□□□□ 0.49
CCDC116-201ENST00000292779 NMIQ13287 307 aaPredicted RBP18.11■□□□□ 0.49
CCDC116-201ENST00000292779 KCNB2Q92953 911 aa18.11■□□□□ 0.49
CCDC116-201ENST00000292779 NECTIN1Q15223 517 aa18.1■□□□□ 0.49
CCDC116-201ENST00000292779 JARID2Q92833 1246 aaPredicted RBP18.1■□□□□ 0.49
CCDC116-201ENST00000292779 BOLA2Q9H3K6 86 aa18.1■□□□□ 0.49
CCDC116-201ENST00000292779 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.1■□□□□ 0.49
CCDC116-201ENST00000292779 SLIT2O94813 1529 aa18.1■□□□□ 0.49
CCDC116-201ENST00000292779 WNK3Q9BYP7 1800 aa18.1■□□□□ 0.49
CCDC116-201ENST00000292779 VPS53Q5VIR6 699 aa18.1■□□□□ 0.49
CCDC116-201ENST00000292779 ZCRB1Q8TBF4 217 aaKnown RBP18.1■□□□□ 0.49
CCDC116-201ENST00000292779 C8orf37Q96NL8 207 aa18.1■□□□□ 0.49
CCDC116-201ENST00000292779 ZSWIM6Q9HCJ5 1215 aa18.1■□□□□ 0.49
CCDC116-201ENST00000292779 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
CCDC116-201ENST00000292779 PLEKHG2Q9H7P9 1386 aa18.1■□□□□ 0.49
CCDC116-201ENST00000292779 HIP1O00291 1037 aa18.09■□□□□ 0.49
CCDC116-201ENST00000292779 GADD45BO75293 160 aaPredicted RBP18.09■□□□□ 0.49
CCDC116-201ENST00000292779 USP48Q86UV5 1035 aa18.09■□□□□ 0.49
CCDC116-201ENST00000292779 TM6SF1Q9BZW5 370 aa18.09■□□□□ 0.49
CCDC116-201ENST00000292779 RBM8AQ9Y5S9 174 aaKnown RBP18.09■□□□□ 0.49
CCDC116-201ENST00000292779 DISP2A7MBM2 1401 aa18.09■□□□□ 0.49
CCDC116-201ENST00000292779 DDX54Q8TDD1 881 aaKnown RBP18.09■□□□□ 0.49
CCDC116-201ENST00000292779 SMC3Q9UQE7 1217 aa18.09■□□□□ 0.49
CCDC116-201ENST00000292779 CYP46A1Q9Y6A2 500 aa18.09■□□□□ 0.49
CCDC116-201ENST00000292779 ARFGEF2Q9Y6D5 1785 aa18.08■□□□□ 0.49
CCDC116-201ENST00000292779 ZSCAN22P10073 491 aaPredicted RBP18.08■□□□□ 0.48
CCDC116-201ENST00000292779 SYT1P21579 422 aa18.08■□□□□ 0.48
CCDC116-201ENST00000292779 NWD2Q9ULI1 1742 aa18.08■□□□□ 0.48
CCDC116-201ENST00000292779 STX6O43752 255 aa18.07■□□□□ 0.48
CCDC116-201ENST00000292779 ZKSCAN1P17029 563 aaPredicted RBP18.07■□□□□ 0.48
CCDC116-201ENST00000292779 CREB3L3Q68CJ9 461 aa18.07■□□□□ 0.48
CCDC116-201ENST00000292779 MAP4K1Q92918 833 aa18.07■□□□□ 0.48
CCDC116-201ENST00000292779 FSD1Q9BTV5 496 aa18.07■□□□□ 0.48
CCDC116-201ENST00000292779 TOGARAM1Q9Y4F4 1720 aa18.07■□□□□ 0.48
CCDC116-201ENST00000292779 BCL9LQ86UU0 1499 aa18.07■□□□□ 0.48
CCDC116-201ENST00000292779 A0A0D9SFI3 127 aa18.07■□□□□ 0.48
CCDC116-201ENST00000292779 KCNJ4P48050 445 aa18.07■□□□□ 0.48
CCDC116-201ENST00000292779 CCDC83Q8IWF9 413 aa18.07■□□□□ 0.48
CCDC116-201ENST00000292779 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
CCDC116-201ENST00000292779 ATP5J2-PTCD1G3V325 749 aa18.06■□□□□ 0.48
CCDC116-201ENST00000292779 PTCD1O75127 700 aaKnown RBP18.06■□□□□ 0.48
CCDC116-201ENST00000292779 UBE3BQ7Z3V4 1068 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms