RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 NYXQ9GZU5 481 aa14.01□□□□□ -0.17
USP41-201ENST00000292729 TSKSQ9UJT2 592 aa14.01□□□□□ -0.17
USP41-201ENST00000292729 NUP98P52948 1817 aa14.01□□□□□ -0.17
USP41-201ENST00000292729 COL4A5P29400 1685 aa14.01□□□□□ -0.17
USP41-201ENST00000292729 KCNQ3O43525 872 aa14□□□□□ -0.17
USP41-201ENST00000292729 AOC2O75106 756 aa14□□□□□ -0.17
USP41-201ENST00000292729 PIP4K2AP48426 406 aaPredicted RBP14□□□□□ -0.17
USP41-201ENST00000292729 LARGE2Q8N3Y3 721 aa14□□□□□ -0.17
USP41-201ENST00000292729 ADARB2Q9NS39 739 aaKnown RBP14□□□□□ -0.17
USP41-201ENST00000292729 CLSPNQ9HAW4 1339 aa13.99□□□□□ -0.17
USP41-201ENST00000292729 FAM177BA6PVY3 158 aa13.99□□□□□ -0.17
USP41-201ENST00000292729 TRAF5O00463 557 aa13.99□□□□□ -0.17
USP41-201ENST00000292729 DGKZQ13574 1117 aa13.99□□□□□ -0.17
USP41-201ENST00000292729 NIM1KQ8IY84 436 aa13.99□□□□□ -0.17
USP41-201ENST00000292729 VPS33BQ9H267 617 aa13.99□□□□□ -0.17
USP41-201ENST00000292729 COL3A1P02461 1466 aaPredicted RBP13.99□□□□□ -0.17
USP41-201ENST00000292729 RIC1Q4ADV7 1423 aa13.98□□□□□ -0.17
USP41-201ENST00000292729 KIF7Q2M1P5 1343 aa13.98□□□□□ -0.17
USP41-201ENST00000292729 U2SURPO15042 1029 aaKnown RBP13.98□□□□□ -0.17
USP41-201ENST00000292729 HOXA10P31260 410 aaPredicted RBP13.98□□□□□ -0.17
USP41-201ENST00000292729 RPGRQ92834 1020 aaKnown RBP13.98□□□□□ -0.17
USP41-201ENST00000292729 GPRC5DQ9NZD1 345 aa13.98□□□□□ -0.17
USP41-201ENST00000292729 LAMB4A4D0S4 1761 aa13.98□□□□□ -0.17
USP41-201ENST00000292729 NBPF26B4DH59 902 aa13.97□□□□□ -0.17
USP41-201ENST00000292729 CELF2O95319 508 aaKnown RBP13.97□□□□□ -0.17
USP41-201ENST00000292729 NBPF10Q6P3W6 841 aaKnown RBP13.97□□□□□ -0.17
USP41-201ENST00000292729 NBPF15Q8N660 670 aa13.97□□□□□ -0.17
USP41-201ENST00000292729 IBTKQ9P2D0 1353 aaPredicted RBP13.96□□□□□ -0.17
USP41-201ENST00000292729 CDHR2Q9BYE9 1310 aa13.96□□□□□ -0.17
USP41-201ENST00000292729 PRAMEF22A3QJZ6 481 aa13.96□□□□□ -0.17
USP41-201ENST00000292729 NOGQ13253 232 aa13.96□□□□□ -0.17
USP41-201ENST00000292729 HLFQ16534 295 aa13.96□□□□□ -0.17
USP41-201ENST00000292729 ZC3H15Q8WU90 426 aaKnown RBP13.96□□□□□ -0.17
USP41-201ENST00000292729 CRAMP1Q96RY5 1269 aa13.96□□□□□ -0.17
USP41-201ENST00000292729 TMX4Q9H1E5 349 aaPredicted RBP13.96□□□□□ -0.17
USP41-201ENST00000292729 PGAP2Q9UHJ9 254 aa13.96□□□□□ -0.17
USP41-201ENST00000292729 TNRC18O15417 2968 aaPredicted RBP13.96□□□□□ -0.17
USP41-201ENST00000292729 ABCC12Q96J65 1359 aa13.96□□□□□ -0.18
USP41-201ENST00000292729 ERVV-1B6SEH8 477 aa13.95□□□□□ -0.18
USP41-201ENST00000292729 RBM17Q96I25 401 aaKnown RBP13.95□□□□□ -0.18
USP41-201ENST00000292729 AKAP11Q9UKA4 1901 aa13.94□□□□□ -0.18
USP41-201ENST00000292729 PPEF1O14829 653 aaPredicted RBP13.94□□□□□ -0.18
USP41-201ENST00000292729 PPIP5K2O43314 1243 aa13.94□□□□□ -0.18
USP41-201ENST00000292729 CIAPIN1Q6FI81 312 aa13.94□□□□□ -0.18
USP41-201ENST00000292729 CDC37L1Q7L3B6 337 aa13.94□□□□□ -0.18
USP41-201ENST00000292729 NUTM1Q86Y26 1132 aa13.94□□□□□ -0.18
USP41-201ENST00000292729 SUPT20HQ8NEM7 779 aa13.94□□□□□ -0.18
USP41-201ENST00000292729 RTF1Q92541 710 aaKnown RBP13.94□□□□□ -0.18
USP41-201ENST00000292729 NPC1L1Q9UHC9 1359 aa13.94□□□□□ -0.18
USP41-201ENST00000292729 PER1O15534 1290 aaPredicted RBP13.93□□□□□ -0.18
USP41-201ENST00000292729 CC2D1BQ5T0F9 858 aaKnown RBP13.93□□□□□ -0.18
USP41-201ENST00000292729 GLIS2Q9BZE0 524 aaPredicted RBP13.93□□□□□ -0.18
USP41-201ENST00000292729 ZNRF3Q9ULT6 936 aa13.93□□□□□ -0.18
USP41-201ENST00000292729 PRKAR2BP31323 418 aa13.92□□□□□ -0.18
USP41-201ENST00000292729 CXCL9Q07325 125 aa13.92□□□□□ -0.18
USP41-201ENST00000292729 PHACTR3Q96KR7 559 aa13.92□□□□□ -0.18
USP41-201ENST00000292729 SAGE1Q9NXZ1 904 aa13.92□□□□□ -0.18
USP41-201ENST00000292729 MAP3K15Q6ZN16 1313 aa13.91□□□□□ -0.18
USP41-201ENST00000292729 HTATSF1O43719 755 aaKnown RBP13.91□□□□□ -0.18
USP41-201ENST00000292729 TNIP1Q15025 636 aa13.91□□□□□ -0.18
USP41-201ENST00000292729 AOC3Q16853 763 aa13.91□□□□□ -0.18
USP41-201ENST00000292729 KIF6Q6ZMV9 814 aa13.91□□□□□ -0.18
USP41-201ENST00000292729 RSPH6AQ9H0K4 717 aa13.91□□□□□ -0.18
USP41-201ENST00000292729 ZNF408Q9H9D4 720 aa13.91□□□□□ -0.18
USP41-201ENST00000292729 GMPSP49915 693 aaPredicted RBP13.9□□□□□ -0.18
USP41-201ENST00000292729 PRPF38BQ5VTL8 546 aaKnown RBP13.9□□□□□ -0.18
USP41-201ENST00000292729 BCL2L13Q9BXK5 485 aa13.9□□□□□ -0.18
USP41-201ENST00000292729 RTFDC1Q9BY42 306 aaPredicted RBP13.9□□□□□ -0.18
USP41-201ENST00000292729 ATP6V0A2Q9Y487 856 aa13.9□□□□□ -0.18
USP41-201ENST00000292729 POLR2AP24928 1970 aaKnown RBP13.9□□□□□ -0.18
USP41-201ENST00000292729 TCERG1O14776 1098 aaKnown RBP13.89□□□□□ -0.19
USP41-201ENST00000292729 HUNKP57058 714 aa13.89□□□□□ -0.19
USP41-201ENST00000292729 MCM10Q7L590 875 aa13.89□□□□□ -0.19
USP41-201ENST00000292729 CFAP53Q96M91 514 aa13.89□□□□□ -0.19
USP41-201ENST00000292729 NLRP3Q96P20 1036 aa13.89□□□□□ -0.19
USP41-201ENST00000292729 ANKRD36CQ5JPF3 1778 aa13.88□□□□□ -0.19
USP41-201ENST00000292729 KDM3BQ7LBC6 1761 aa13.88□□□□□ -0.19
USP41-201ENST00000292729 H7C1D1 291 aa13.88□□□□□ -0.19
USP41-201ENST00000292729 TAF7Q15545 349 aaPredicted RBP13.88□□□□□ -0.19
USP41-201ENST00000292729 SUSD4Q5VX71 490 aa13.88□□□□□ -0.19
USP41-201ENST00000292729 RGMBQ6NW40 437 aa13.88□□□□□ -0.19
USP41-201ENST00000292729 PPP1R42Q7Z4L9 355 aa13.88□□□□□ -0.19
USP41-201ENST00000292729 CCDC102AQ96A19 550 aa13.88□□□□□ -0.19
USP41-201ENST00000292729 NUDCQ9Y266 331 aa13.88□□□□□ -0.19
USP41-201ENST00000292729 UBN2Q6ZU65 1347 aa13.88□□□□□ -0.19
USP41-201ENST00000292729 NTSR2O95665 410 aa13.87□□□□□ -0.19
USP41-201ENST00000292729 GPTP24298 496 aa13.87□□□□□ -0.19
USP41-201ENST00000292729 HIRAP54198 1017 aaPredicted RBP13.87□□□□□ -0.19
USP41-201ENST00000292729 SOX10P56693 466 aa13.87□□□□□ -0.19
USP41-201ENST00000292729 KIAA2012Q0VF49 1180 aa13.87□□□□□ -0.19
USP41-201ENST00000292729 TRIM26Q12899 539 aaPredicted RBP13.87□□□□□ -0.19
USP41-201ENST00000292729 PARP10Q53GL7 1025 aa13.87□□□□□ -0.19
USP41-201ENST00000292729 DPP8Q6V1X1 898 aaPredicted RBP13.87□□□□□ -0.19
USP41-201ENST00000292729 ZNF34Q8IZ26 560 aa13.87□□□□□ -0.19
USP41-201ENST00000292729 NGEFQ8N5V2 710 aa13.87□□□□□ -0.19
USP41-201ENST00000292729 ZIC5Q96T25 663 aa13.87□□□□□ -0.19
USP41-201ENST00000292729 CNOT7Q9UIV1 285 aaKnown RBP13.87□□□□□ -0.19
USP41-201ENST00000292729 LAMB2P55268 1798 aa13.86□□□□□ -0.19
USP41-201ENST00000292729 FAM155AB1AL88 458 aaPredicted RBP13.86□□□□□ -0.19
USP41-201ENST00000292729 BBOX1O75936 387 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms