RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 SLKQ9H2G2 1235 aaPredicted RBP20.48■□□□□ 0.87
HIF3A-203ENST00000291300 AK9Q5TCS8 1911 aa20.48■□□□□ 0.87
HIF3A-203ENST00000291300 ERC1Q8IUD2 1116 aa20.48■□□□□ 0.87
HIF3A-203ENST00000291300 CCDC191Q8NCU4 936 aa20.48■□□□□ 0.87
HIF3A-203ENST00000291300 ERC2O15083 957 aa20.47■□□□□ 0.87
HIF3A-203ENST00000291300 ESYT1Q9BSJ8 1104 aa20.47■□□□□ 0.87
HIF3A-203ENST00000291300 COPRSQ9NQ92 184 aa20.47■□□□□ 0.87
HIF3A-203ENST00000291300 CASC1Q6TDU7 716 aa20.47■□□□□ 0.87
HIF3A-203ENST00000291300 SYNE4Q8N205 404 aa20.47■□□□□ 0.87
HIF3A-203ENST00000291300 CHMP3Q9Y3E7 222 aa20.46■□□□□ 0.87
HIF3A-203ENST00000291300 MAP3K15Q6ZN16 1313 aa20.46■□□□□ 0.87
HIF3A-203ENST00000291300 IFIT2P09913 472 aaKnown RBP20.45■□□□□ 0.86
HIF3A-203ENST00000291300 VPS72Q15906 364 aa20.45■□□□□ 0.86
HIF3A-203ENST00000291300 KIF6Q6ZMV9 814 aa20.45■□□□□ 0.86
HIF3A-203ENST00000291300 PTF1AQ7RTS3 328 aa20.45■□□□□ 0.86
HIF3A-203ENST00000291300 GPTP24298 496 aa20.45■□□□□ 0.86
HIF3A-203ENST00000291300 TFCP2Q12800 502 aa20.44■□□□□ 0.86
HIF3A-203ENST00000291300 ITPK1Q13572 414 aa20.44■□□□□ 0.86
HIF3A-203ENST00000291300 FNBP4Q8N3X1 1017 aaPredicted RBP20.44■□□□□ 0.86
HIF3A-203ENST00000291300 ANTXR1Q9H6X2 564 aa20.44■□□□□ 0.86
HIF3A-203ENST00000291300 ECHDC1Q9NTX5 307 aa20.44■□□□□ 0.86
HIF3A-203ENST00000291300 TBC1D2BQ9UPU7 963 aa20.44■□□□□ 0.86
HIF3A-203ENST00000291300 TTC41PQ6P2S7 1318 aa20.44■□□□□ 0.86
HIF3A-203ENST00000291300 INTS5Q6P9B9 1019 aaKnown RBP20.44■□□□□ 0.86
HIF3A-203ENST00000291300 CERKQ8TCT0 537 aa20.44■□□□□ 0.86
HIF3A-203ENST00000291300 FAM89AQ96GI7 184 aa20.44■□□□□ 0.86
HIF3A-203ENST00000291300 ZNF594Q96JF6 807 aaPredicted RBP20.44■□□□□ 0.86
HIF3A-203ENST00000291300 GIGYF2Q6Y7W6 1299 aaKnown RBP20.43■□□□□ 0.86
HIF3A-203ENST00000291300 ATP6V1AP38606 617 aa20.42■□□□□ 0.86
HIF3A-203ENST00000291300 MYH14Q7Z406 1995 aaKnown RBP20.42■□□□□ 0.86
HIF3A-203ENST00000291300 LOC102724428A0A0B4J2F2 783 aa20.42■□□□□ 0.86
HIF3A-203ENST00000291300 GLRX3O76003 335 aaKnown RBP20.42■□□□□ 0.86
HIF3A-203ENST00000291300 SIK1P57059 783 aa20.42■□□□□ 0.86
HIF3A-203ENST00000291300 NUP98P52948 1817 aa20.41■□□□□ 0.86
HIF3A-203ENST00000291300 REC8O95072 547 aa20.41■□□□□ 0.86
HIF3A-203ENST00000291300 SNX21Q969T3 373 aa20.41■□□□□ 0.86
HIF3A-203ENST00000291300 CCDC85AQ96PX6 553 aaPredicted RBP20.41■□□□□ 0.86
HIF3A-203ENST00000291300 USP21Q9UK80 565 aa20.41■□□□□ 0.86
HIF3A-203ENST00000291300 PALLDQ8WX93 1383 aa20.41■□□□□ 0.86
HIF3A-203ENST00000291300 HSPA1LP34931 641 aa20.41■□□□□ 0.86
HIF3A-203ENST00000291300 KCNQ4P56696 695 aa20.41■□□□□ 0.86
HIF3A-203ENST00000291300 TRIM28Q13263 835 aaKnown RBP20.41■□□□□ 0.86
HIF3A-203ENST00000291300 FAM182BQ5T319 152 aa20.41■□□□□ 0.86
HIF3A-203ENST00000291300 ATG9AQ7Z3C6 839 aa20.41■□□□□ 0.86
HIF3A-203ENST00000291300 HSCBQ8IWL3 235 aa20.41■□□□□ 0.86
HIF3A-203ENST00000291300 CRKLP46109 303 aaKnown RBP20.4■□□□□ 0.86
HIF3A-203ENST00000291300 DBNLQ9UJU6 430 aaKnown RBP20.4■□□□□ 0.86
HIF3A-203ENST00000291300 LRRC24Q50LG9 513 aa20.39■□□□□ 0.86
HIF3A-203ENST00000291300 TNNI3KQ59H18 835 aa20.39■□□□□ 0.86
HIF3A-203ENST00000291300 NLRP10Q86W26 655 aa20.39■□□□□ 0.86
HIF3A-203ENST00000291300 DZIP3Q86Y13 1208 aaKnown RBP20.39■□□□□ 0.86
HIF3A-203ENST00000291300 FPGT-TNNI3KV9GXZ4 949 aa20.39■□□□□ 0.86
HIF3A-203ENST00000291300 IL6STP40189 918 aaPredicted RBP20.39■□□□□ 0.85
HIF3A-203ENST00000291300 MYT1Q01538 1121 aa20.39■□□□□ 0.85
HIF3A-203ENST00000291300 CNTROBQ8N137 903 aa20.39■□□□□ 0.85
HIF3A-203ENST00000291300 PUS3Q9BZE2 481 aaKnown RBP20.39■□□□□ 0.85
HIF3A-203ENST00000291300 ANO2Q9NQ90 1003 aa20.39■□□□□ 0.85
HIF3A-203ENST00000291300 PALD1Q9ULE6 856 aa20.39■□□□□ 0.85
HIF3A-203ENST00000291300 ANKRD36CQ5JPF3 1778 aa20.39■□□□□ 0.85
HIF3A-203ENST00000291300 EIF5P55010 431 aaKnown RBP20.38■□□□□ 0.85
HIF3A-203ENST00000291300 BOLA2Q9H3K6 86 aa20.38■□□□□ 0.85
HIF3A-203ENST00000291300 PCCAP05165 728 aaPredicted RBP20.38■□□□□ 0.85
HIF3A-203ENST00000291300 CCDC87Q9NVE4 849 aa20.38■□□□□ 0.85
HIF3A-203ENST00000291300 SPATA31A6Q5VVP1 1343 aa20.38■□□□□ 0.85
HIF3A-203ENST00000291300 UBN2Q6ZU65 1347 aa20.38■□□□□ 0.85
HIF3A-203ENST00000291300 NFKBIBQ15653 356 aa20.37■□□□□ 0.85
HIF3A-203ENST00000291300 ZBTB38Q8NAP3 1195 aaPredicted RBP20.37■□□□□ 0.85
HIF3A-203ENST00000291300 EDC3Q96F86 508 aaKnown RBP20.37■□□□□ 0.85
HIF3A-203ENST00000291300 NDUFB9Q9Y6M9 179 aa20.37■□□□□ 0.85
HIF3A-203ENST00000291300 CWC27Q6UX04 472 aaKnown RBP20.36■□□□□ 0.85
HIF3A-203ENST00000291300 DBNDD2Q9BQY9 259 aa20.36■□□□□ 0.85
HIF3A-203ENST00000291300 GPATCH3Q96I76 525 aa20.36■□□□□ 0.85
HIF3A-203ENST00000291300 SGSM2O43147 1006 aa20.35■□□□□ 0.85
HIF3A-203ENST00000291300 RREB1Q92766 1687 aa20.35■□□□□ 0.85
HIF3A-203ENST00000291300 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
HIF3A-203ENST00000291300 SMIM5Q71RC9 77 aa20.35■□□□□ 0.85
HIF3A-203ENST00000291300 RABEP1Q15276 862 aa20.34■□□□□ 0.85
HIF3A-203ENST00000291300 FOXD4L1Q9NU39 408 aa20.34■□□□□ 0.85
HIF3A-203ENST00000291300 THSD7AQ9UPZ6 1657 aa20.34■□□□□ 0.85
HIF3A-203ENST00000291300 ERVV-1B6SEH8 477 aa20.33■□□□□ 0.84
HIF3A-203ENST00000291300 EYA2O00167 538 aa20.33■□□□□ 0.84
HIF3A-203ENST00000291300 TIMM10P62072 90 aa20.33■□□□□ 0.84
HIF3A-203ENST00000291300 AEBP2Q6ZN18 517 aaPredicted RBP20.33■□□□□ 0.84
HIF3A-203ENST00000291300 ZNF34Q8IZ26 560 aa20.33■□□□□ 0.84
HIF3A-203ENST00000291300 LINC00116Q8NCU8 138 aa20.33■□□□□ 0.84
HIF3A-203ENST00000291300 PLA2G12BQ9BX93 195 aa20.33■□□□□ 0.84
HIF3A-203ENST00000291300 COL5A3P25940 1745 aaPredicted RBP20.32■□□□□ 0.84
HIF3A-203ENST00000291300 CICQ96RK0 1608 aaPredicted RBP20.32■□□□□ 0.84
HIF3A-203ENST00000291300 FRAT2O75474 233 aaPredicted RBP20.32■□□□□ 0.84
HIF3A-203ENST00000291300 CSF1RP07333 972 aa20.32■□□□□ 0.84
HIF3A-203ENST00000291300 EVI5LQ96CN4 794 aa20.32■□□□□ 0.84
HIF3A-203ENST00000291300 K7ELQ4 463 aaPredicted RBP20.32■□□□□ 0.84
HIF3A-203ENST00000291300 LSG1Q9H089 658 aaKnown RBP20.32■□□□□ 0.84
HIF3A-203ENST00000291300 TRMT112Q9UI30 125 aaKnown RBP20.32■□□□□ 0.84
HIF3A-203ENST00000291300 AFF2P51816 1311 aa20.31■□□□□ 0.84
HIF3A-203ENST00000291300 FAM177BA6PVY3 158 aa20.31■□□□□ 0.84
HIF3A-203ENST00000291300 CAMTA2O94983 1202 aa20.31■□□□□ 0.84
HIF3A-203ENST00000291300 CHGBP05060 677 aa20.31■□□□□ 0.84
HIF3A-203ENST00000291300 HSP90AB3PQ58FF7 597 aa20.31■□□□□ 0.84
HIF3A-203ENST00000291300 MEX3CQ5U5Q3 659 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms