RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 GTF2E1P29083 439 aaPredicted RBP10.53□□□□□ -0.72
PTPDC1-201ENST00000288976 OS9Q13438 667 aaPredicted RBP10.53□□□□□ -0.72
PTPDC1-201ENST00000288976 MTX1Q13505 466 aa10.53□□□□□ -0.72
PTPDC1-201ENST00000288976 USP44Q9H0E7 712 aa10.53□□□□□ -0.72
PTPDC1-201ENST00000288976 H7C1W4 665 aa10.53□□□□□ -0.72
PTPDC1-201ENST00000288976 UBTFL1P0CB47 393 aaPredicted RBP10.53□□□□□ -0.72
PTPDC1-201ENST00000288976 PCCAP05165 728 aaPredicted RBP10.53□□□□□ -0.72
PTPDC1-201ENST00000288976 ZBTB3Q9H5J0 574 aa10.53□□□□□ -0.72
PTPDC1-201ENST00000288976 ZPR1O75312 459 aa10.52□□□□□ -0.72
PTPDC1-201ENST00000288976 CASP7P55210 303 aa10.52□□□□□ -0.72
PTPDC1-201ENST00000288976 KDM2BQ8NHM5 1336 aa10.52□□□□□ -0.73
PTPDC1-201ENST00000288976 ZNF827Q17R98 1081 aa10.52□□□□□ -0.73
PTPDC1-201ENST00000288976 ARHGEF1Q92888 912 aaKnown RBP10.52□□□□□ -0.73
PTPDC1-201ENST00000288976 CARMIL3Q8ND23 1372 aa10.52□□□□□ -0.73
PTPDC1-201ENST00000288976 EZH2Q15910 746 aaKnown RBP10.52□□□□□ -0.73
PTPDC1-201ENST00000288976 NLRP10Q86W26 655 aa10.52□□□□□ -0.73
PTPDC1-201ENST00000288976 MEIS3Q99687 375 aa10.52□□□□□ -0.73
PTPDC1-201ENST00000288976 STK32BQ9NY57 414 aa10.52□□□□□ -0.73
PTPDC1-201ENST00000288976 RFC4P35249 363 aa10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 ZBTB38Q8NAP3 1195 aaPredicted RBP10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 HLFQ16534 295 aa10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 ANKRD44Q8N8A2 993 aa10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 NYXQ9GZU5 481 aa10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 RWDD1Q9H446 243 aaPredicted RBP10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 RTL9Q8NET4 1388 aa10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 CDK11BP21127 795 aaKnown RBP10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 CWF19L2Q2TBE0 894 aaKnown RBP10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 CENPQQ7L2Z9 268 aaPredicted RBP10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 PPP1R42Q7Z4L9 355 aa10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 C9orf78Q9NZ63 289 aaPredicted RBP10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 EN1Q05925 392 aaPredicted RBP10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 SLC15A2Q16348 729 aa10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 BCL2L12Q9HB09 334 aa10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 UBN2Q6ZU65 1347 aa10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 PNPLA7Q6ZV29 1317 aa10.51□□□□□ -0.73
PTPDC1-201ENST00000288976 RABL6Q3YEC7 729 aaPredicted RBP10.5□□□□□ -0.73
PTPDC1-201ENST00000288976 CEP85Q6P2H3 762 aa10.5□□□□□ -0.73
PTPDC1-201ENST00000288976 CCDC136Q96JN2 1154 aa10.5□□□□□ -0.73
PTPDC1-201ENST00000288976 PPP1R1BQ9UD71 204 aaPredicted RBP10.5□□□□□ -0.73
PTPDC1-201ENST00000288976 NAP1L2Q9ULW6 460 aaPredicted RBP10.5□□□□□ -0.73
PTPDC1-201ENST00000288976 TBC1D2BQ9UPU7 963 aa10.5□□□□□ -0.73
PTPDC1-201ENST00000288976 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.5□□□□□ -0.73
PTPDC1-201ENST00000288976 HMMRO75330 724 aa10.5□□□□□ -0.73
PTPDC1-201ENST00000288976 KIF13BQ9NQT8 1826 aa10.5□□□□□ -0.73
PTPDC1-201ENST00000288976 UPF1Q92900 1129 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTPDC1-201ENST00000288976 KCNQ4P56696 695 aa10.49□□□□□ -0.73
PTPDC1-201ENST00000288976 UTP14AQ9BVJ6 771 aaKnown RBP10.49□□□□□ -0.73
PTPDC1-201ENST00000288976 DLEC1Q9Y238 1755 aa10.49□□□□□ -0.73
PTPDC1-201ENST00000288976 NTSR2O95665 410 aa10.49□□□□□ -0.73
PTPDC1-201ENST00000288976 ATP8B2P98198 1209 aa10.49□□□□□ -0.73
PTPDC1-201ENST00000288976 POLA2Q14181 598 aa10.49□□□□□ -0.73
PTPDC1-201ENST00000288976 USPL1Q5W0Q7 1092 aa10.49□□□□□ -0.73
PTPDC1-201ENST00000288976 GCC1Q96CN9 775 aa10.49□□□□□ -0.73
PTPDC1-201ENST00000288976 TNRC6CQ9HCJ0 1690 aaKnown RBP10.49□□□□□ -0.73
PTPDC1-201ENST00000288976 TFCP2L1Q9NZI6 479 aa10.49□□□□□ -0.73
PTPDC1-201ENST00000288976 NBPF7P0C2Y1 421 aaPredicted RBP10.48□□□□□ -0.73
PTPDC1-201ENST00000288976 AMIGO3Q86WK7 504 aa10.48□□□□□ -0.73
PTPDC1-201ENST00000288976 PCDHB15Q9Y5E8 787 aa10.48□□□□□ -0.73
PTPDC1-201ENST00000288976 A0A1B0GUL6 1792 aa10.48□□□□□ -0.73
PTPDC1-201ENST00000288976 GYS1P13807 737 aa10.48□□□□□ -0.73
PTPDC1-201ENST00000288976 LRRFIP2Q9Y608 721 aaKnown RBP10.48□□□□□ -0.73
PTPDC1-201ENST00000288976 LRRC37AA6NMS7 1700 aa10.48□□□□□ -0.73
PTPDC1-201ENST00000288976 ARAP2Q8WZ64 1704 aa10.48□□□□□ -0.73
PTPDC1-201ENST00000288976 SLC10A5Q5PT55 438 aa10.48□□□□□ -0.73
PTPDC1-201ENST00000288976 SSH3Q8TE77 659 aa10.48□□□□□ -0.73
PTPDC1-201ENST00000288976 TMX4Q9H1E5 349 aaPredicted RBP10.48□□□□□ -0.73
PTPDC1-201ENST00000288976 NIP7Q9Y221 180 aaKnown RBP eCLIP10.48□□□□□ -0.73
PTPDC1-201ENST00000288976 G3V3G9 751 aa10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 TM4SF1P30408 202 aa10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 DCAF8Q5TAQ9 597 aa10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 NLGN1Q8N2Q7 840 aa10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 SUCLG2Q96I99 432 aa10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 ATP5J2-PTCD1G3V325 749 aa10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 SLC16A10Q8TF71 515 aa10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 SH3TC1Q8TE82 1336 aa10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 APBB1O00213 710 aa10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 FOXO4P98177 505 aa10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 TBC1D9BQ66K14 1250 aa10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 SETDB2Q96T68 719 aa10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 PHF14O94880 888 aa10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 COL23A1Q86Y22 540 aaPredicted RBP10.47□□□□□ -0.73
PTPDC1-201ENST00000288976 CSF1RP07333 972 aa10.46□□□□□ -0.73
PTPDC1-201ENST00000288976 SRP68Q9UHB9 627 aaKnown RBP10.46□□□□□ -0.73
PTPDC1-201ENST00000288976 FBXO3Q9UK99 471 aa10.46□□□□□ -0.73
PTPDC1-201ENST00000288976 ANKRD31Q8N7Z5 1873 aa10.46□□□□□ -0.73
PTPDC1-201ENST00000288976 PDE8AO60658 829 aa10.46□□□□□ -0.74
PTPDC1-201ENST00000288976 SUSD4Q5VX71 490 aa10.46□□□□□ -0.74
PTPDC1-201ENST00000288976 SMC5Q8IY18 1101 aa10.46□□□□□ -0.74
PTPDC1-201ENST00000288976 KAZALD1Q96I82 304 aa10.46□□□□□ -0.74
PTPDC1-201ENST00000288976 BICC1Q9H694 974 aaKnown RBP10.46□□□□□ -0.74
PTPDC1-201ENST00000288976 ANO8Q9HCE9 1232 aaPredicted RBP10.46□□□□□ -0.74
PTPDC1-201ENST00000288976 FGD1P98174 961 aa10.46□□□□□ -0.74
PTPDC1-201ENST00000288976 UBE3BQ7Z3V4 1068 aa10.46□□□□□ -0.74
PTPDC1-201ENST00000288976 SIRT2Q8IXJ6 389 aa10.46□□□□□ -0.74
PTPDC1-201ENST00000288976 TRMT112Q9UI30 125 aaKnown RBP10.46□□□□□ -0.74
PTPDC1-201ENST00000288976 HSP90AB4PQ58FF6 505 aa10.45□□□□□ -0.74
PTPDC1-201ENST00000288976 DCTPP1Q9H773 170 aa10.45□□□□□ -0.74
PTPDC1-201ENST00000288976 NOP58Q9Y2X3 529 aaKnown RBP10.45□□□□□ -0.74
PTPDC1-201ENST00000288976 RAB11FIP3O75154 756 aa10.45□□□□□ -0.74
PTPDC1-201ENST00000288976 CLSTN1O94985 981 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms