RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 TM6SF1Q9BZW5 370 aa8.76□□□□□ -1.01
SPARCL1-201ENST00000282470 CARD10Q9BWT7 1032 aa8.75□□□□□ -1.01
SPARCL1-201ENST00000282470 DDX49Q9Y6V7 483 aaKnown RBP8.75□□□□□ -1.01
SPARCL1-201ENST00000282470 ZNF445P59923 1031 aa8.75□□□□□ -1.01
SPARCL1-201ENST00000282470 GAS2L3Q86XJ1 694 aa8.75□□□□□ -1.01
SPARCL1-201ENST00000282470 RASEFQ8IZ41 740 aa8.75□□□□□ -1.01
SPARCL1-201ENST00000282470 PRDM11Q9NQV5 511 aa8.75□□□□□ -1.01
SPARCL1-201ENST00000282470 SLAIN2Q9P270 581 aa8.75□□□□□ -1.01
SPARCL1-201ENST00000282470 MED23Q9ULK4 1368 aa8.75□□□□□ -1.01
SPARCL1-201ENST00000282470 CCDC171Q6TFL3 1326 aa8.75□□□□□ -1.01
SPARCL1-201ENST00000282470 PTPN12Q05209 780 aaKnown RBP8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 PANK2Q9BZ23 570 aa8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 TLR7Q9NYK1 1049 aaKnown RBP8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 NBPF26B4DH59 902 aa8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 NECTIN1Q15223 517 aa8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 NBPF14Q5TI25 921 aa8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 NBPF10Q6P3W6 841 aaKnown RBP8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 NBPF15Q8N660 670 aa8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 PLCH1Q4KWH8 1693 aa8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 IL2RBP14784 551 aa8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 PTH1RQ03431 593 aa8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 VPS53Q5VIR6 699 aa8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 MAP4K1Q92918 833 aa8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 ZSWIM6Q9HCJ5 1215 aa8.74□□□□□ -1.01
SPARCL1-201ENST00000282470 RPAP1Q9BWH6 1393 aaPredicted RBP8.73□□□□□ -1.01
SPARCL1-201ENST00000282470 H7C1W4 665 aa8.73□□□□□ -1.01
SPARCL1-201ENST00000282470 ATP5JP18859 108 aa8.73□□□□□ -1.01
SPARCL1-201ENST00000282470 AK2P54819 239 aa8.73□□□□□ -1.01
SPARCL1-201ENST00000282470 TOM1L2Q6ZVM7 507 aa8.73□□□□□ -1.01
SPARCL1-201ENST00000282470 RUFY3Q7L099 469 aa8.73□□□□□ -1.01
SPARCL1-201ENST00000282470 UBE3BQ7Z3V4 1068 aa8.73□□□□□ -1.01
SPARCL1-201ENST00000282470 CCDC8Q9H0W5 538 aaPredicted RBP8.73□□□□□ -1.01
SPARCL1-201ENST00000282470 LIMCH1Q9UPQ0 1083 aa8.73□□□□□ -1.01
SPARCL1-201ENST00000282470 GPT2Q8TD30 523 aa8.73□□□□□ -1.01
SPARCL1-201ENST00000282470 SIL1Q9H173 461 aa8.73□□□□□ -1.01
SPARCL1-201ENST00000282470 SPEF2Q9C093 1822 aa8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 LRP6O75581 1613 aa8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 WDR33Q9C0J8 1336 aaKnown RBP8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 A0A087WZG4 1122 aa8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 PIP4K2AP48426 406 aaPredicted RBP8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 NMIQ13287 307 aaPredicted RBP8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 TNNI3KQ59H18 835 aa8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 TICAM2Q86XR7 235 aa8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 KLHDC4Q8TBB5 520 aa8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 FPGT-TNNI3KV9GXZ4 949 aa8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 PRPF40AO75400 957 aaKnown RBP8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 CASTP20810 708 aaKnown RBP8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 FOXO4P98177 505 aa8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 ZSCAN23Q3MJ62 389 aa8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 FAM227BQ96M60 508 aa8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 DBNLQ9UJU6 430 aaKnown RBP8.72□□□□□ -1.01
SPARCL1-201ENST00000282470 MBD3O95983 291 aa8.71□□□□□ -1.01
SPARCL1-201ENST00000282470 ALDH8A1Q9H2A2 487 aaPredicted RBP8.71□□□□□ -1.01
SPARCL1-201ENST00000282470 GPR108Q9NPR9 543 aa8.71□□□□□ -1.01
SPARCL1-201ENST00000282470 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.71□□□□□ -1.01
SPARCL1-201ENST00000282470 RBM8AQ9Y5S9 174 aaKnown RBP8.71□□□□□ -1.01
SPARCL1-201ENST00000282470 ITGB4P16144 1822 aa8.71□□□□□ -1.01
SPARCL1-201ENST00000282470 WNK3Q9BYP7 1800 aa8.71□□□□□ -1.01
SPARCL1-201ENST00000282470 ZNF335Q9H4Z2 1342 aaPredicted RBP8.71□□□□□ -1.01
SPARCL1-201ENST00000282470 COL14A1Q05707 1796 aaKnown RBP8.71□□□□□ -1.01
SPARCL1-201ENST00000282470 A0A0D9SFI3 127 aa8.71□□□□□ -1.02
SPARCL1-201ENST00000282470 TFCP2Q12800 502 aa8.71□□□□□ -1.02
SPARCL1-201ENST00000282470 TSGA10IPQ3SY00 556 aa8.71□□□□□ -1.02
SPARCL1-201ENST00000282470 CREB3L3Q68CJ9 461 aa8.71□□□□□ -1.02
SPARCL1-201ENST00000282470 PRPF40BQ6NWY9 871 aaKnown RBP8.71□□□□□ -1.02
SPARCL1-201ENST00000282470 NOL8Q76FK4 1167 aaKnown RBP8.71□□□□□ -1.02
SPARCL1-201ENST00000282470 CCDC191Q8NCU4 936 aa8.71□□□□□ -1.02
SPARCL1-201ENST00000282470 ZSCAN31Q96LW9 406 aaPredicted RBP8.71□□□□□ -1.02
SPARCL1-201ENST00000282470 BOLA2Q9H3K6 86 aa8.71□□□□□ -1.02
SPARCL1-201ENST00000282470 RTN4Q9NQC3 1192 aaKnown RBP8.71□□□□□ -1.02
SPARCL1-201ENST00000282470 SH2B1Q9NRF2 756 aaPredicted RBP8.71□□□□□ -1.02
SPARCL1-201ENST00000282470 CWC25Q9NXE8 425 aaPredicted RBP8.71□□□□□ -1.02
SPARCL1-201ENST00000282470 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.71□□□□□ -1.02
SPARCL1-201ENST00000282470 ATP5J2-PTCD1G3V325 749 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 PTCD1O75127 700 aaKnown RBP8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 ZKSCAN1P17029 563 aaPredicted RBP8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 ADCK5Q3MIX3 580 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 USPL1Q5W0Q7 1092 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 CAVIN1Q6NZI2 390 aaKnown RBP8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 TMEM87AQ8NBN3 555 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 ARXQ96QS3 562 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 FSD1Q9BTV5 496 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 CYP46A1Q9Y6A2 500 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 COL22A1Q8NFW1 1626 aaPredicted RBP8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 DISP2A7MBM2 1401 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 SLC27A2O14975 620 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 TTLL7Q6ZT98 887 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 JAKMIP1Q96N16 626 aaKnown RBP8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 ATG3Q9NT62 314 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 PDRG1Q9NUG6 133 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 HMG20BQ9P0W2 317 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 LMBR1LQ6UX01 489 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 HAUS7Q99871 368 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 ANKRD36CQ5JPF3 1778 aa8.7□□□□□ -1.02
SPARCL1-201ENST00000282470 PALLDQ8WX93 1383 aa8.69□□□□□ -1.02
SPARCL1-201ENST00000282470 ZNF609O15014 1411 aa8.69□□□□□ -1.02
SPARCL1-201ENST00000282470 PSMA5P28066 241 aa8.69□□□□□ -1.02
SPARCL1-201ENST00000282470 RNF20Q5VTR2 975 aa8.69□□□□□ -1.02
SPARCL1-201ENST00000282470 ATG9AQ7Z3C6 839 aa8.69□□□□□ -1.02
SPARCL1-201ENST00000282470 CIAO1O76071 339 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms