RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 RFX5P48382 616 aaPredicted RBP17.95■□□□□ 0.46
TRIM23-202ENST00000274327 FOXO4P98177 505 aa17.95■□□□□ 0.46
TRIM23-202ENST00000274327 NPM2Q86SE8 214 aaKnown RBP17.95■□□□□ 0.46
TRIM23-202ENST00000274327 TBC1D2BQ9UPU7 963 aa17.95■□□□□ 0.46
TRIM23-202ENST00000274327 PA2G4Q9UQ80 394 aaKnown RBP17.95■□□□□ 0.46
TRIM23-202ENST00000274327 PCCAP05165 728 aaPredicted RBP17.94■□□□□ 0.46
TRIM23-202ENST00000274327 PDE1AP54750 535 aa17.93■□□□□ 0.46
TRIM23-202ENST00000274327 RBM6P78332 1123 aaKnown RBP17.93■□□□□ 0.46
TRIM23-202ENST00000274327 NLRP10Q86W26 655 aa17.93■□□□□ 0.46
TRIM23-202ENST00000274327 ARXQ96QS3 562 aa17.93■□□□□ 0.46
TRIM23-202ENST00000274327 BCL11BQ9C0K0 894 aaPredicted RBP17.93■□□□□ 0.46
TRIM23-202ENST00000274327 SEC24BO95487 1268 aa17.93■□□□□ 0.46
TRIM23-202ENST00000274327 RC3H1Q5TC82 1133 aaKnown RBP17.93■□□□□ 0.46
TRIM23-202ENST00000274327 KRT27Q7Z3Y8 459 aa17.93■□□□□ 0.46
TRIM23-202ENST00000274327 ERC1Q8IUD2 1116 aa17.93■□□□□ 0.46
TRIM23-202ENST00000274327 ZNF34Q8IZ26 560 aa17.93■□□□□ 0.46
TRIM23-202ENST00000274327 COPRSQ9NQ92 184 aa17.93■□□□□ 0.46
TRIM23-202ENST00000274327 STAP2Q9UGK3 403 aa17.93■□□□□ 0.46
TRIM23-202ENST00000274327 CAMTA2O94983 1202 aa17.92■□□□□ 0.46
TRIM23-202ENST00000274327 ZBTB38Q8NAP3 1195 aaPredicted RBP17.92■□□□□ 0.46
TRIM23-202ENST00000274327 PLA2G12BQ9BX93 195 aa17.92■□□□□ 0.46
TRIM23-202ENST00000274327 IL1RAPL2Q9NP60 686 aa17.92■□□□□ 0.46
TRIM23-202ENST00000274327 CDHR2Q9BYE9 1310 aa17.92■□□□□ 0.46
TRIM23-202ENST00000274327 LMBR1LQ6UX01 489 aa17.91■□□□□ 0.46
TRIM23-202ENST00000274327 FAM196AQ6ZSG2 479 aa17.91■□□□□ 0.46
TRIM23-202ENST00000274327 AOX1Q06278 1338 aa17.91■□□□□ 0.46
TRIM23-202ENST00000274327 MX1P20591 662 aa17.91■□□□□ 0.46
TRIM23-202ENST00000274327 PTPN12Q05209 780 aaKnown RBP17.91■□□□□ 0.46
TRIM23-202ENST00000274327 OS9Q13438 667 aaPredicted RBP17.91■□□□□ 0.46
TRIM23-202ENST00000274327 SASH1O94885 1247 aa17.9■□□□□ 0.46
TRIM23-202ENST00000274327 GPTP24298 496 aa17.9■□□□□ 0.46
TRIM23-202ENST00000274327 KCNQ4P56696 695 aa17.9■□□□□ 0.46
TRIM23-202ENST00000274327 G3BP1Q13283 466 aaKnown RBP eCLIP17.9■□□□□ 0.46
TRIM23-202ENST00000274327 BCL11AQ9H165 835 aa17.9■□□□□ 0.46
TRIM23-202ENST00000274327 CCNL1Q9UK58 526 aaPredicted RBP17.9■□□□□ 0.46
TRIM23-202ENST00000274327 UBN2Q6ZU65 1347 aa17.9■□□□□ 0.46
TRIM23-202ENST00000274327 SCN7AQ01118 1682 aa17.89■□□□□ 0.46
TRIM23-202ENST00000274327 MYH3P11055 1940 aa17.89■□□□□ 0.46
TRIM23-202ENST00000274327 RTL5Q5HYW3 569 aaPredicted RBP17.89■□□□□ 0.45
TRIM23-202ENST00000274327 KLHDC4Q8TBB5 520 aa17.88■□□□□ 0.45
TRIM23-202ENST00000274327 USP42Q9H9J4 1324 aaKnown RBP17.88■□□□□ 0.45
TRIM23-202ENST00000274327 RGL2O15211 777 aa17.88■□□□□ 0.45
TRIM23-202ENST00000274327 FAM89AQ96GI7 184 aa17.88■□□□□ 0.45
TRIM23-202ENST00000274327 C4BP0C0L5 1744 aa17.88■□□□□ 0.45
TRIM23-202ENST00000274327 RPS6KA4O75676 772 aa17.87■□□□□ 0.45
TRIM23-202ENST00000274327 ANP32AP39687 249 aaKnown RBP17.87■□□□□ 0.45
TRIM23-202ENST00000274327 NUTM1Q86Y26 1132 aa17.87■□□□□ 0.45
TRIM23-202ENST00000274327 CDC45O75419 566 aa17.86■□□□□ 0.45
TRIM23-202ENST00000274327 CSF1RP07333 972 aa17.86■□□□□ 0.45
TRIM23-202ENST00000274327 SDSP20132 328 aa17.86■□□□□ 0.45
TRIM23-202ENST00000274327 CLASRPQ8N2M8 674 aaKnown RBP17.86■□□□□ 0.45
TRIM23-202ENST00000274327 CLEC4GQ6UXB4 293 aa17.86■□□□□ 0.45
TRIM23-202ENST00000274327 SIL1Q9H173 461 aa17.86■□□□□ 0.45
TRIM23-202ENST00000274327 LAMB2P55268 1798 aa17.85■□□□□ 0.45
TRIM23-202ENST00000274327 PARP10Q53GL7 1025 aa17.85■□□□□ 0.45
TRIM23-202ENST00000274327 TSHZ3Q63HK5 1081 aa17.85■□□□□ 0.45
TRIM23-202ENST00000274327 TBC1D9Q6ZT07 1266 aa17.85■□□□□ 0.45
TRIM23-202ENST00000274327 TRMT112Q9UI30 125 aaKnown RBP17.85■□□□□ 0.45
TRIM23-202ENST00000274327 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.85■□□□□ 0.45
TRIM23-202ENST00000274327 SUSD4Q5VX71 490 aa17.84■□□□□ 0.45
TRIM23-202ENST00000274327 SYNE4Q8N205 404 aa17.84■□□□□ 0.45
TRIM23-202ENST00000274327 PI4K2BQ8TCG2 481 aa17.84■□□□□ 0.45
TRIM23-202ENST00000274327 ZNF652Q9Y2D9 606 aa17.84■□□□□ 0.45
TRIM23-202ENST00000274327 CHMP3Q9Y3E7 222 aa17.84■□□□□ 0.45
TRIM23-202ENST00000274327 TTC41PQ6P2S7 1318 aa17.84■□□□□ 0.45
TRIM23-202ENST00000274327 FBXO41Q8TF61 875 aa17.84■□□□□ 0.45
TRIM23-202ENST00000274327 DDX60Q8IY21 1712 aaKnown RBP17.83■□□□□ 0.44
TRIM23-202ENST00000274327 IRS4O14654 1257 aaPredicted RBP17.83■□□□□ 0.44
TRIM23-202ENST00000274327 EAF2Q96CJ1 260 aaPredicted RBP17.83■□□□□ 0.44
TRIM23-202ENST00000274327 C4AP0C0L4 1744 aa17.83■□□□□ 0.44
TRIM23-202ENST00000274327 PDE8AO60658 829 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 AK7Q96M32 723 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 UTP14AQ9BVJ6 771 aaKnown RBP17.82■□□□□ 0.44
TRIM23-202ENST00000274327 UPF2Q9HAU5 1272 aaKnown RBP17.82■□□□□ 0.44
TRIM23-202ENST00000274327 LRRC4BQ9NT99 713 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 NARFQ9UHQ1 456 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 AK9Q5TCS8 1911 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 GNPATO15228 680 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 CIAO1O76071 339 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 TRIM37O94972 964 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 RXRBP28702 533 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 ATG9AQ7Z3C6 839 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 AACSQ86V21 672 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 TTLL11Q8NHH1 800 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 TBC1D32Q96NH3 1257 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 FBXO3Q9UK99 471 aa17.82■□□□□ 0.44
TRIM23-202ENST00000274327 NIP7Q9Y221 180 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRIM23-202ENST00000274327 RTCBQ9Y3I0 505 aaKnown RBP17.82■□□□□ 0.44
TRIM23-202ENST00000274327 UBR3Q6ZT12 1888 aa17.81■□□□□ 0.44
TRIM23-202ENST00000274327 COL24A1Q17RW2 1714 aa17.81■□□□□ 0.44
TRIM23-202ENST00000274327 SH3TC1Q8TE82 1336 aa17.81■□□□□ 0.44
TRIM23-202ENST00000274327 EYA2O00167 538 aa17.81■□□□□ 0.44
TRIM23-202ENST00000274327 NTSR2O95665 410 aa17.81■□□□□ 0.44
TRIM23-202ENST00000274327 IFIT2P09913 472 aaKnown RBP17.81■□□□□ 0.44
TRIM23-202ENST00000274327 MFAP1P55081 439 aaKnown RBP17.81■□□□□ 0.44
TRIM23-202ENST00000274327 CTSWP56202 376 aa17.81■□□□□ 0.44
TRIM23-202ENST00000274327 SLC27A3Q5K4L6 730 aa17.81■□□□□ 0.44
TRIM23-202ENST00000274327 BCL2L12Q9HB09 334 aa17.81■□□□□ 0.44
TRIM23-202ENST00000274327 RGS17Q9UGC6 210 aaPredicted RBP17.81■□□□□ 0.44
TRIM23-202ENST00000274327 IL15P40933 162 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms