RNA–Protein interactions for RNA: ENST00000273347.9

NXPE3-201, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPE3, Length 3,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-201ENST00000273347 PIP4K2AP48426 406 aaPredicted RBP16.39■□□□□ 0.21
NXPE3-201ENST00000273347 COPS6Q7L5N1 327 aa16.39■□□□□ 0.21
NXPE3-201ENST00000273347 MAP4K1Q92918 833 aa16.39■□□□□ 0.21
NXPE3-201ENST00000273347 C9orf78Q9NZ63 289 aaPredicted RBP16.39■□□□□ 0.21
NXPE3-201ENST00000273347 A0A0D9SFI3 127 aa16.38■□□□□ 0.21
NXPE3-201ENST00000273347 CHRNA2Q15822 529 aa16.38■□□□□ 0.21
NXPE3-201ENST00000273347 DCAF5Q96JK2 942 aa16.38■□□□□ 0.21
NXPE3-201ENST00000273347 MCCP23508 829 aa16.38■□□□□ 0.21
NXPE3-201ENST00000273347 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.38■□□□□ 0.21
NXPE3-201ENST00000273347 CCDC171Q6TFL3 1326 aa16.38■□□□□ 0.21
NXPE3-201ENST00000273347 GADD45BO75293 160 aaPredicted RBP16.38■□□□□ 0.21
NXPE3-201ENST00000273347 LMOD2Q6P5Q4 547 aa16.38■□□□□ 0.21
NXPE3-201ENST00000273347 IFNL2Q8IZJ0 200 aa16.38■□□□□ 0.21
NXPE3-201ENST00000273347 COPRSQ9NQ92 184 aa16.38■□□□□ 0.21
NXPE3-201ENST00000273347 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
NXPE3-201ENST00000273347 TM6SF1Q9BZW5 370 aa16.37■□□□□ 0.21
NXPE3-201ENST00000273347 CHGBP05060 677 aa16.37■□□□□ 0.21
NXPE3-201ENST00000273347 AACSQ86V21 672 aa16.37■□□□□ 0.21
NXPE3-201ENST00000273347 ERC1Q8IUD2 1116 aa16.37■□□□□ 0.21
NXPE3-201ENST00000273347 CLASRPQ8N2M8 674 aaKnown RBP16.37■□□□□ 0.21
NXPE3-201ENST00000273347 EVI5LQ96CN4 794 aa16.37■□□□□ 0.21
NXPE3-201ENST00000273347 ZNF609O15014 1411 aa16.37■□□□□ 0.21
NXPE3-201ENST00000273347 NOL8Q76FK4 1167 aaKnown RBP16.37■□□□□ 0.21
NXPE3-201ENST00000273347 MYL6BP14649 208 aa16.36■□□□□ 0.21
NXPE3-201ENST00000273347 ZNF589Q86UQ0 364 aaPredicted RBP16.36■□□□□ 0.21
NXPE3-201ENST00000273347 LARP6Q9BRS8 491 aaKnown RBP16.36■□□□□ 0.21
NXPE3-201ENST00000273347 FOXO4P98177 505 aa16.36■□□□□ 0.21
NXPE3-201ENST00000273347 NMIQ13287 307 aaPredicted RBP16.36■□□□□ 0.21
NXPE3-201ENST00000273347 LARP1Q6PKG0 1096 aaKnown RBP16.36■□□□□ 0.21
NXPE3-201ENST00000273347 DBNLQ9UJU6 430 aaKnown RBP16.36■□□□□ 0.21
NXPE3-201ENST00000273347 BRINP3Q76B58 766 aa16.36■□□□□ 0.21
NXPE3-201ENST00000273347 NLRP2Q9NX02 1062 aa16.36■□□□□ 0.21
NXPE3-201ENST00000273347 MYH7P12883 1935 aa16.35■□□□□ 0.21
NXPE3-201ENST00000273347 TATP17735 454 aaPredicted RBP16.35■□□□□ 0.21
NXPE3-201ENST00000273347 MYD88Q99836 296 aa16.35■□□□□ 0.21
NXPE3-201ENST00000273347 RAPGEF4Q8WZA2 1011 aa16.35■□□□□ 0.21
NXPE3-201ENST00000273347 CCDC8Q9H0W5 538 aaPredicted RBP16.35■□□□□ 0.21
NXPE3-201ENST00000273347 USPL1Q5W0Q7 1092 aa16.35■□□□□ 0.21
NXPE3-201ENST00000273347 AKAP11Q9UKA4 1901 aa16.35■□□□□ 0.21
NXPE3-201ENST00000273347 SNRPA1P09661 255 aaKnown RBP16.34■□□□□ 0.21
NXPE3-201ENST00000273347 NKX1-1Q15270 411 aaPredicted RBP16.34■□□□□ 0.21
NXPE3-201ENST00000273347 FOXD4L5Q5VV16 416 aaPredicted RBP16.34■□□□□ 0.21
NXPE3-201ENST00000273347 FOXD4L4Q8WXT5 416 aaPredicted RBP16.34■□□□□ 0.21
NXPE3-201ENST00000273347 SOS2Q07890 1332 aaPredicted RBP16.34■□□□□ 0.21
NXPE3-201ENST00000273347 GOLGA6L22H0YM25 854 aa16.34■□□□□ 0.21
NXPE3-201ENST00000273347 VPS53Q5VIR6 699 aa16.34■□□□□ 0.21
NXPE3-201ENST00000273347 MYO5AQ9Y4I1 1855 aaKnown RBP16.34■□□□□ 0.21
NXPE3-201ENST00000273347 DTNBO60941 627 aa16.34■□□□□ 0.21
NXPE3-201ENST00000273347 LRSAM1Q6UWE0 723 aa16.34■□□□□ 0.21
NXPE3-201ENST00000273347 EDC3Q96F86 508 aaKnown RBP16.34■□□□□ 0.21
NXPE3-201ENST00000273347 COL16A1Q07092 1604 aaPredicted RBP16.33■□□□□ 0.21
NXPE3-201ENST00000273347 JARID2Q92833 1246 aaPredicted RBP16.33■□□□□ 0.21
NXPE3-201ENST00000273347 MYH3P11055 1940 aa16.33■□□□□ 0.21
NXPE3-201ENST00000273347 RFX7Q2KHR2 1363 aa16.33■□□□□ 0.21
NXPE3-201ENST00000273347 NASPP49321 788 aaPredicted RBP16.33■□□□□ 0.2
NXPE3-201ENST00000273347 TSGA10IPQ3SY00 556 aa16.33■□□□□ 0.2
NXPE3-201ENST00000273347 ANKRD13DQ6ZTN6 518 aa16.33■□□□□ 0.2
NXPE3-201ENST00000273347 ALDH8A1Q9H2A2 487 aaPredicted RBP16.33■□□□□ 0.2
NXPE3-201ENST00000273347 LIMCH1Q9UPQ0 1083 aa16.33■□□□□ 0.2
NXPE3-201ENST00000273347 DDX58O95786 925 aaKnown RBP16.33■□□□□ 0.2
NXPE3-201ENST00000273347 CASTP20810 708 aaKnown RBP16.33■□□□□ 0.2
NXPE3-201ENST00000273347 ME3Q16798 604 aa16.33■□□□□ 0.2
NXPE3-201ENST00000273347 CREB3L3Q68CJ9 461 aa16.33■□□□□ 0.2
NXPE3-201ENST00000273347 SLIT2O94813 1529 aa16.33■□□□□ 0.2
NXPE3-201ENST00000273347 LRP6O75581 1613 aa16.32■□□□□ 0.2
NXPE3-201ENST00000273347 SLC27A2O14975 620 aa16.32■□□□□ 0.2
NXPE3-201ENST00000273347 SYT1P21579 422 aa16.32■□□□□ 0.2
NXPE3-201ENST00000273347 PRPF40BQ6NWY9 871 aaKnown RBP16.32■□□□□ 0.2
NXPE3-201ENST00000273347 ATG9AQ7Z3C6 839 aa16.32■□□□□ 0.2
NXPE3-201ENST00000273347 TPCN1Q9ULQ1 816 aa16.32■□□□□ 0.2
NXPE3-201ENST00000273347 WDR17Q8IZU2 1322 aa16.32■□□□□ 0.2
NXPE3-201ENST00000273347 RBM8AQ9Y5S9 174 aaKnown RBP16.32■□□□□ 0.2
NXPE3-201ENST00000273347 ARAP2Q8WZ64 1704 aa16.32■□□□□ 0.2
NXPE3-201ENST00000273347 TOB2Q14106 344 aaPredicted RBP16.32■□□□□ 0.2
NXPE3-201ENST00000273347 RIC3Q7Z5B4 369 aa16.32■□□□□ 0.2
NXPE3-201ENST00000273347 USP48Q86UV5 1035 aa16.32■□□□□ 0.2
NXPE3-201ENST00000273347 H7C1W4 665 aa16.31■□□□□ 0.2
NXPE3-201ENST00000273347 ATF3P18847 181 aa16.31■□□□□ 0.2
NXPE3-201ENST00000273347 SIL1Q9H173 461 aa16.31■□□□□ 0.2
NXPE3-201ENST00000273347 GDPD2Q9HCC8 539 aa16.31■□□□□ 0.2
NXPE3-201ENST00000273347 CASZ1Q86V15 1759 aa16.31■□□□□ 0.2
NXPE3-201ENST00000273347 LRP5O75197 1615 aa16.31■□□□□ 0.2
NXPE3-201ENST00000273347 ESPNB1AK53 854 aa16.31■□□□□ 0.2
NXPE3-201ENST00000273347 IFIT2P09913 472 aaKnown RBP16.31■□□□□ 0.2
NXPE3-201ENST00000273347 CCDC173Q0VFZ6 552 aa16.31■□□□□ 0.2
NXPE3-201ENST00000273347 TNNI3KQ59H18 835 aa16.31■□□□□ 0.2
NXPE3-201ENST00000273347 MTMR6Q9Y217 621 aa16.31■□□□□ 0.2
NXPE3-201ENST00000273347 FPGT-TNNI3KV9GXZ4 949 aa16.31■□□□□ 0.2
NXPE3-201ENST00000273347 FMNL2Q96PY5 1086 aa16.3■□□□□ 0.2
NXPE3-201ENST00000273347 RREB1Q92766 1687 aa16.3■□□□□ 0.2
NXPE3-201ENST00000273347 SYCE3A1L190 88 aa16.3■□□□□ 0.2
NXPE3-201ENST00000273347 ATP5JP18859 108 aa16.3■□□□□ 0.2
NXPE3-201ENST00000273347 TFCP2Q12800 502 aa16.3■□□□□ 0.2
NXPE3-201ENST00000273347 TAF5LO75529 589 aa16.3■□□□□ 0.2
NXPE3-201ENST00000273347 ZSCAN22P10073 491 aaPredicted RBP16.3■□□□□ 0.2
NXPE3-201ENST00000273347 CADPS2Q86UW7 1296 aa16.3■□□□□ 0.2
NXPE3-201ENST00000273347 PLBD2Q8NHP8 589 aa16.3■□□□□ 0.2
NXPE3-201ENST00000273347 ECM29Q5VYK3 1845 aa16.29■□□□□ 0.2
NXPE3-201ENST00000273347 NUP98P52948 1817 aa16.29■□□□□ 0.2
NXPE3-201ENST00000273347 FUCA2Q9BTY2 467 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms