RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 USP16Q9Y5T5 823 aa15.29■□□□□ 0.04
COL8A1-202ENST00000273342 PREX1Q8TCU6 1659 aa15.29■□□□□ 0.04
COL8A1-202ENST00000273342 KLHDC4Q8TBB5 520 aa15.29■□□□□ 0.04
COL8A1-202ENST00000273342 LEO1Q8WVC0 666 aaPredicted RBP15.29■□□□□ 0.04
COL8A1-202ENST00000273342 SH2B1Q9NRF2 756 aaPredicted RBP15.29■□□□□ 0.04
COL8A1-202ENST00000273342 ECHDC1Q9NTX5 307 aa15.29■□□□□ 0.04
COL8A1-202ENST00000273342 AOX1Q06278 1338 aa15.29■□□□□ 0.04
COL8A1-202ENST00000273342 IL17RAQ96F46 866 aa15.28■□□□□ 0.04
COL8A1-202ENST00000273342 LGR6Q9HBX8 967 aa15.28■□□□□ 0.04
COL8A1-202ENST00000273342 TLR7Q9NYK1 1049 aaKnown RBP15.28■□□□□ 0.04
COL8A1-202ENST00000273342 CCDC171Q6TFL3 1326 aa15.28■□□□□ 0.04
COL8A1-202ENST00000273342 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
COL8A1-202ENST00000273342 NECTIN1Q15223 517 aa15.28■□□□□ 0.04
COL8A1-202ENST00000273342 BLOC1S2Q6QNY1 142 aa15.28■□□□□ 0.04
COL8A1-202ENST00000273342 DNAAF4Q8WXU2 420 aa15.28■□□□□ 0.04
COL8A1-202ENST00000273342 PGBD1Q96JS3 809 aa15.28■□□□□ 0.04
COL8A1-202ENST00000273342 NAP1L2Q9ULW6 460 aaPredicted RBP15.28■□□□□ 0.04
COL8A1-202ENST00000273342 ROBO2Q9HCK4 1378 aa15.28■□□□□ 0.04
COL8A1-202ENST00000273342 A0A0D9SFI3 127 aa15.27■□□□□ 0.04
COL8A1-202ENST00000273342 CTNNA3Q9UI47 895 aa15.27■□□□□ 0.04
COL8A1-202ENST00000273342 A2ML1A8K2U0 1454 aa15.27■□□□□ 0.04
COL8A1-202ENST00000273342 ERICH4A6NGS2 130 aa15.27■□□□□ 0.04
COL8A1-202ENST00000273342 SLC27A2O14975 620 aa15.27■□□□□ 0.04
COL8A1-202ENST00000273342 HSP90B1P14625 803 aaKnown RBP15.27■□□□□ 0.04
COL8A1-202ENST00000273342 CEP135Q66GS9 1140 aa15.27■□□□□ 0.04
COL8A1-202ENST00000273342 FSD1Q9BTV5 496 aa15.27■□□□□ 0.04
COL8A1-202ENST00000273342 SMTNL1A8MU46 457 aa15.27■□□□□ 0.03
COL8A1-202ENST00000273342 GOLGA6L19H0YKK7 550 aa15.27■□□□□ 0.03
COL8A1-202ENST00000273342 KIF20AO95235 890 aa15.27■□□□□ 0.03
COL8A1-202ENST00000273342 LTKP29376 864 aa15.27■□□□□ 0.03
COL8A1-202ENST00000273342 AIMP1Q12904 312 aaKnown RBP15.27■□□□□ 0.03
COL8A1-202ENST00000273342 ST7Q9NRC1 585 aa15.27■□□□□ 0.03
COL8A1-202ENST00000273342 ZNF215Q9UL58 517 aaPredicted RBP15.27■□□□□ 0.03
COL8A1-202ENST00000273342 DLC1Q96QB1 1528 aa15.27■□□□□ 0.03
COL8A1-202ENST00000273342 C11orf57Q6ZUT1 292 aaPredicted RBP15.26■□□□□ 0.03
COL8A1-202ENST00000273342 OGFRQ9NZT2 677 aa15.26■□□□□ 0.03
COL8A1-202ENST00000273342 H3BQV1 296 aa15.26■□□□□ 0.03
COL8A1-202ENST00000273342 BEND3Q5T5X7 828 aa15.26■□□□□ 0.03
COL8A1-202ENST00000273342 IFFO2Q5TF58 517 aa15.26■□□□□ 0.03
COL8A1-202ENST00000273342 CEP170BQ9Y4F5 1589 aaPredicted RBP15.26■□□□□ 0.03
COL8A1-202ENST00000273342 ZNF589Q86UQ0 364 aaPredicted RBP15.25■□□□□ 0.03
COL8A1-202ENST00000273342 PPP6R1Q9UPN7 881 aa15.25■□□□□ 0.03
COL8A1-202ENST00000273342 FGD1P98174 961 aa15.25■□□□□ 0.03
COL8A1-202ENST00000273342 GUCY1B3Q02153 619 aa15.25■□□□□ 0.03
COL8A1-202ENST00000273342 PLA2G4DQ86XP0 818 aa15.25■□□□□ 0.03
COL8A1-202ENST00000273342 BRF1Q92994 677 aa15.25■□□□□ 0.03
COL8A1-202ENST00000273342 SCAND2PQ9GZW5 306 aaPredicted RBP15.25■□□□□ 0.03
COL8A1-202ENST00000273342 CLSTN2Q9H4D0 955 aa15.25■□□□□ 0.03
COL8A1-202ENST00000273342 BECN2A8MW95 431 aa15.24■□□□□ 0.03
COL8A1-202ENST00000273342 SKILP12757 684 aa15.24■□□□□ 0.03
COL8A1-202ENST00000273342 EAF2Q96CJ1 260 aaPredicted RBP15.24■□□□□ 0.03
COL8A1-202ENST00000273342 PRAMEF22A3QJZ6 481 aa15.24■□□□□ 0.03
COL8A1-202ENST00000273342 ELF2Q15723 593 aa15.24■□□□□ 0.03
COL8A1-202ENST00000273342 MAP3K2Q9Y2U5 619 aa15.24■□□□□ 0.03
COL8A1-202ENST00000273342 NPHP3Q7Z494 1330 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 PDCP20941 246 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 TOB2Q14106 344 aaPredicted RBP15.23■□□□□ 0.03
COL8A1-202ENST00000273342 PROSER3Q2NL68 480 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 GPATCH3Q96I76 525 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 FMNL2Q96PY5 1086 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 FEZ1Q99689 392 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 FLT4P35916 1363 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 IGSF1Q8N6C5 1336 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 PTPN14Q15678 1187 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 KMT5BQ4FZB7 885 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 MPRIPQ6WCQ1 1025 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 CCDC129Q6ZRS4 1044 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 EVI5LQ96CN4 794 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 DDX19AQ9NUU7 478 aaKnown RBP15.23■□□□□ 0.03
COL8A1-202ENST00000273342 ARHGEF10O15013 1369 aa15.23■□□□□ 0.03
COL8A1-202ENST00000273342 PEAK1Q9H792 1746 aa15.22■□□□□ 0.03
COL8A1-202ENST00000273342 OVOS2A0A0J9YW53 1432 aa15.22■□□□□ 0.03
COL8A1-202ENST00000273342 OVOS2Q6IE36 1432 aa15.22■□□□□ 0.03
COL8A1-202ENST00000273342 EPB41L2O43491 1005 aaKnown RBP15.22■□□□□ 0.03
COL8A1-202ENST00000273342 HSP90AB4PQ58FF6 505 aa15.22■□□□□ 0.03
COL8A1-202ENST00000273342 LRRC8AQ8IWT6 810 aa15.22■□□□□ 0.03
COL8A1-202ENST00000273342 TRERF1Q96PN7 1200 aa15.22■□□□□ 0.03
COL8A1-202ENST00000273342 AMOTL2Q9Y2J4 779 aa15.22■□□□□ 0.03
COL8A1-202ENST00000273342 MAP4K1Q92918 833 aa15.22■□□□□ 0.03
COL8A1-202ENST00000273342 TTC41PQ6P2S7 1318 aa15.22■□□□□ 0.03
COL8A1-202ENST00000273342 USP6P35125 1406 aa15.22■□□□□ 0.03
COL8A1-202ENST00000273342 PSMA5P28066 241 aa15.22■□□□□ 0.03
COL8A1-202ENST00000273342 TDRD7Q8NHU6 1098 aaKnown RBP15.22■□□□□ 0.03
COL8A1-202ENST00000273342 KIF18AQ8NI77 898 aa15.22■□□□□ 0.03
COL8A1-202ENST00000273342 TM6SF1Q9BZW5 370 aa15.22■□□□□ 0.03
COL8A1-202ENST00000273342 NEO1Q92859 1461 aa15.21■□□□□ 0.03
COL8A1-202ENST00000273342 TTC21AQ8NDW8 1320 aa15.21■□□□□ 0.03
COL8A1-202ENST00000273342 CCDC69A6NI79 296 aa15.21■□□□□ 0.03
COL8A1-202ENST00000273342 GORABQ5T7V8 394 aa15.21■□□□□ 0.03
COL8A1-202ENST00000273342 SEC62Q99442 399 aaKnown RBP15.21■□□□□ 0.03
COL8A1-202ENST00000273342 DDX41Q9UJV9 622 aaKnown RBP15.21■□□□□ 0.03
COL8A1-202ENST00000273342 MAP3K5Q99683 1374 aa15.21■□□□□ 0.02
COL8A1-202ENST00000273342 RPS6KB1P23443 525 aa15.21■□□□□ 0.02
COL8A1-202ENST00000273342 ABTB2Q8N961 1025 aa15.21■□□□□ 0.02
COL8A1-202ENST00000273342 ZBTB9Q96C00 473 aa15.21■□□□□ 0.02
COL8A1-202ENST00000273342 PAXBP1Q9Y5B6 917 aa15.21■□□□□ 0.02
COL8A1-202ENST00000273342 SASH1O94885 1247 aa15.2■□□□□ 0.02
COL8A1-202ENST00000273342 HOXC9P31274 260 aa15.2■□□□□ 0.02
COL8A1-202ENST00000273342 G3BP1Q13283 466 aaKnown RBP eCLIP15.2■□□□□ 0.02
COL8A1-202ENST00000273342 HDGFP51858 240 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms