RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 C7orf43Q8WVR3 580 aa8.51□□□□□ -1.05
CD53-201ENST00000271324 FMNL2Q96PY5 1086 aa8.51□□□□□ -1.05
CD53-201ENST00000271324 ADAMTSL1Q8N6G6 1762 aa8.51□□□□□ -1.05
CD53-201ENST00000271324 CEMIPQ8WUJ3 1361 aa8.5□□□□□ -1.05
CD53-201ENST00000271324 LTBP3Q9NS15 1303 aa8.5□□□□□ -1.05
CD53-201ENST00000271324 FAM177BA6PVY3 158 aa8.5□□□□□ -1.05
CD53-201ENST00000271324 BTBD11A6QL63 1104 aa8.5□□□□□ -1.05
CD53-201ENST00000271324 NPHP1O15259 732 aa8.5□□□□□ -1.05
CD53-201ENST00000271324 FOXN1O15353 648 aa8.5□□□□□ -1.05
CD53-201ENST00000271324 STYK1Q6J9G0 422 aa8.5□□□□□ -1.05
CD53-201ENST00000271324 CNKSR1Q969H4 720 aa8.5□□□□□ -1.05
CD53-201ENST00000271324 DDRGK1Q96HY6 314 aa8.5□□□□□ -1.05
CD53-201ENST00000271324 TEX13AQ9BXU3 409 aaPredicted RBP8.5□□□□□ -1.05
CD53-201ENST00000271324 CREBZFQ9NS37 354 aa8.5□□□□□ -1.05
CD53-201ENST00000271324 PASKQ96RG2 1323 aa8.5□□□□□ -1.05
CD53-201ENST00000271324 ZNF541Q9H0D2 1346 aa8.5□□□□□ -1.05
CD53-201ENST00000271324 NBPF26B4DH59 902 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 NEFMP07197 916 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 ST5P78524 1137 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 NBPF10Q6P3W6 841 aaKnown RBP8.49□□□□□ -1.05
CD53-201ENST00000271324 MCM10Q7L590 875 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 SLC51AQ86UW1 340 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 NBPF15Q8N660 670 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 GAS2L2Q8NHY3 880 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 MASTLQ96GX5 879 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 ZNF277Q9NRM2 450 aaPredicted RBP8.49□□□□□ -1.05
CD53-201ENST00000271324 POTEB2H3BUK9 544 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 PRKAR2BP31323 418 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 DCTN1Q14203 1278 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 HLFQ16534 295 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 GLIPR1L2Q4G1C9 344 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 EAPPQ56P03 285 aaPredicted RBP8.49□□□□□ -1.05
CD53-201ENST00000271324 NBPF5PQ86XG9 351 aaPredicted RBP8.49□□□□□ -1.05
CD53-201ENST00000271324 ZNF579Q8NAF0 562 aaKnown RBP8.49□□□□□ -1.05
CD53-201ENST00000271324 IL27Q8NEV9 243 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 RSPH6AQ9H0K4 717 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 TAF1DQ9H5J8 278 aaPredicted RBP8.49□□□□□ -1.05
CD53-201ENST00000271324 MRS2Q9HD23 443 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 PDZRN3Q9UPQ7 1066 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 LAMB4A4D0S4 1761 aa8.49□□□□□ -1.05
CD53-201ENST00000271324 LTBP1Q14766 1721 aa8.48□□□□□ -1.05
CD53-201ENST00000271324 COL4A5P29400 1685 aa8.48□□□□□ -1.05
CD53-201ENST00000271324 CNTNAP1P78357 1384 aa8.48□□□□□ -1.05
CD53-201ENST00000271324 TCERG1O14776 1098 aaKnown RBP8.48□□□□□ -1.05
CD53-201ENST00000271324 ITGBL1O95965 494 aaPredicted RBP8.48□□□□□ -1.05
CD53-201ENST00000271324 VEGFBP49765 207 aa8.48□□□□□ -1.05
CD53-201ENST00000271324 MIS18AQ9NYP9 233 aa8.48□□□□□ -1.05
CD53-201ENST00000271324 TRPM7Q96QT4 1865 aa8.48□□□□□ -1.05
CD53-201ENST00000271324 TAF1P21675 1872 aa8.47□□□□□ -1.05
CD53-201ENST00000271324 NPR1P16066 1061 aa8.47□□□□□ -1.05
CD53-201ENST00000271324 FMR1Q06787 632 aaKnown RBP eCLIP8.47□□□□□ -1.05
CD53-201ENST00000271324 CCDC93Q567U6 631 aa8.47□□□□□ -1.05
CD53-201ENST00000271324 NPM2Q86SE8 214 aaKnown RBP8.47□□□□□ -1.05
CD53-201ENST00000271324 LDHDQ86WU2 507 aa8.47□□□□□ -1.05
CD53-201ENST00000271324 L3MBTL3Q96JM7 780 aaPredicted RBP8.47□□□□□ -1.05
CD53-201ENST00000271324 NIP7Q9Y221 180 aaKnown RBP eCLIP8.47□□□□□ -1.05
CD53-201ENST00000271324 NUDCQ9Y266 331 aa8.47□□□□□ -1.05
CD53-201ENST00000271324 KDM3BQ7LBC6 1761 aa8.47□□□□□ -1.05
CD53-201ENST00000271324 RNF123Q5XPI4 1314 aa8.46□□□□□ -1.05
CD53-201ENST00000271324 KLRG2A4D1S0 409 aaPredicted RBP8.46□□□□□ -1.05
CD53-201ENST00000271324 FKBP4Q02790 459 aaKnown RBP eCLIP8.46□□□□□ -1.05
CD53-201ENST00000271324 MAP1SQ66K74 1059 aaPredicted RBP8.46□□□□□ -1.05
CD53-201ENST00000271324 CLEC4GQ6UXB4 293 aa8.46□□□□□ -1.05
CD53-201ENST00000271324 FAM9BQ8IZU0 186 aa8.46□□□□□ -1.05
CD53-201ENST00000271324 SYNE4Q8N205 404 aa8.46□□□□□ -1.05
CD53-201ENST00000271324 NGEFQ8N5V2 710 aa8.46□□□□□ -1.05
CD53-201ENST00000271324 RTN4Q9NQC3 1192 aaKnown RBP8.46□□□□□ -1.05
CD53-201ENST00000271324 LAMB2P55268 1798 aa8.46□□□□□ -1.06
CD53-201ENST00000271324 SNED1Q8TER0 1413 aa8.45□□□□□ -1.06
CD53-201ENST00000271324 IQCA1LA6NCM1 817 aa8.45□□□□□ -1.06
CD53-201ENST00000271324 TMEM88BA6NKF7 163 aa8.45□□□□□ -1.06
CD53-201ENST00000271324 SNRPA1P09661 255 aaKnown RBP8.45□□□□□ -1.06
CD53-201ENST00000271324 EPHX2P34913 555 aa8.45□□□□□ -1.06
CD53-201ENST00000271324 SOGA3Q5TF21 947 aa8.45□□□□□ -1.06
CD53-201ENST00000271324 NUTM1Q86Y26 1132 aa8.45□□□□□ -1.06
CD53-201ENST00000271324 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.45□□□□□ -1.06
CD53-201ENST00000271324 HACL1Q9UJ83 578 aa8.45□□□□□ -1.06
CD53-201ENST00000271324 ABCC12Q96J65 1359 aa8.45□□□□□ -1.06
CD53-201ENST00000271324 NPC1L1Q9UHC9 1359 aa8.45□□□□□ -1.06
CD53-201ENST00000271324 TNRC18O15417 2968 aaPredicted RBP8.45□□□□□ -1.06
CD53-201ENST00000271324 FZD9O00144 591 aa8.44□□□□□ -1.06
CD53-201ENST00000271324 U2AF1L5P0DN76 240 aaPredicted RBP8.44□□□□□ -1.06
CD53-201ENST00000271324 MS4A1P11836 297 aa8.44□□□□□ -1.06
CD53-201ENST00000271324 IARSP41252 1262 aaKnown RBP8.44□□□□□ -1.06
CD53-201ENST00000271324 LBX1P52954 281 aa8.44□□□□□ -1.06
CD53-201ENST00000271324 U2AF1Q01081 240 aaKnown RBP eCLIP8.44□□□□□ -1.061e-14■■■■■ 49.2
CD53-201ENST00000271324 TPTE2Q6XPS3 522 aa8.44□□□□□ -1.06
CD53-201ENST00000271324 CNTROBQ8N137 903 aa8.44□□□□□ -1.06
CD53-201ENST00000271324 FAM163AQ96GL9 167 aaPredicted RBP8.44□□□□□ -1.06
CD53-201ENST00000271324 PRKRIP1Q9H875 184 aaPredicted RBP8.44□□□□□ -1.06
CD53-201ENST00000271324 RTF1Q92541 710 aaKnown RBP8.44□□□□□ -1.06
CD53-201ENST00000271324 DCBLD2Q96PD2 775 aa8.44□□□□□ -1.06
CD53-201ENST00000271324 WBP1LQ9NX94 342 aa8.44□□□□□ -1.06
CD53-201ENST00000271324 DAXXQ9UER7 740 aaPredicted RBP8.44□□□□□ -1.06
CD53-201ENST00000271324 ZNF652Q9Y2D9 606 aa8.44□□□□□ -1.06
CD53-201ENST00000271324 GJA3Q9Y6H8 435 aa8.44□□□□□ -1.06
CD53-201ENST00000271324 POLR2AP24928 1970 aaKnown RBP8.43□□□□□ -1.06
CD53-201ENST00000271324 CASP8AP2Q9UKL3 1982 aa8.43□□□□□ -1.06
CD53-201ENST00000271324 GPTP24298 496 aa8.43□□□□□ -1.06
CD53-201ENST00000271324 GTF2E1P29083 439 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms