RNA–Protein interactions for RNA: ENST00000269468.9

MBD1-201, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-201ENST00000269468 USP16Q9Y5T5 823 aa17.04■□□□□ 0.32
MBD1-201ENST00000269468 NMIQ13287 307 aaPredicted RBP17.04■□□□□ 0.32
MBD1-201ENST00000269468 PTPN14Q15678 1187 aa17.04■□□□□ 0.32
MBD1-201ENST00000269468 USHBP1Q8N6Y0 703 aa17.04■□□□□ 0.32
MBD1-201ENST00000269468 TDRD7Q8NHU6 1098 aaKnown RBP17.04■□□□□ 0.32
MBD1-201ENST00000269468 JAK2O60674 1132 aa17.03■□□□□ 0.32
MBD1-201ENST00000269468 SYTL4Q96C24 671 aaPredicted RBP17.03■□□□□ 0.32
MBD1-201ENST00000269468 TM6SF1Q9BZW5 370 aa17.03■□□□□ 0.32
MBD1-201ENST00000269468 CCDC8Q9H0W5 538 aaPredicted RBP17.03■□□□□ 0.32
MBD1-201ENST00000269468 CHPF2Q9P2E5 772 aa17.03■□□□□ 0.32
MBD1-201ENST00000269468 SKILP12757 684 aa17.03■□□□□ 0.32
MBD1-201ENST00000269468 KMT5BQ4FZB7 885 aa17.03■□□□□ 0.32
MBD1-201ENST00000269468 ELP1O95163 1332 aa17.03■□□□□ 0.32
MBD1-201ENST00000269468 SLC27A2O14975 620 aa17.02■□□□□ 0.32
MBD1-201ENST00000269468 LRRC8AQ8IWT6 810 aa17.02■□□□□ 0.32
MBD1-201ENST00000269468 TTC21AQ8NDW8 1320 aa17.02■□□□□ 0.32
MBD1-201ENST00000269468 BECN2A8MW95 431 aa17.02■□□□□ 0.32
MBD1-201ENST00000269468 SLFN14P0C7P3 912 aa17.02■□□□□ 0.32
MBD1-201ENST00000269468 ELF2Q15723 593 aa17.02■□□□□ 0.32
MBD1-201ENST00000269468 HSP90AB4PQ58FF6 505 aa17.02■□□□□ 0.32
MBD1-201ENST00000269468 ERCC4Q92889 916 aaPredicted RBP17.02■□□□□ 0.32
MBD1-201ENST00000269468 A2ML1A8K2U0 1454 aa17.02■□□□□ 0.31
MBD1-201ENST00000269468 PPFIA3O75145 1194 aa17.02■□□□□ 0.31
MBD1-201ENST00000269468 C11orf57Q6ZUT1 292 aaPredicted RBP17.02■□□□□ 0.31
MBD1-201ENST00000269468 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.31
MBD1-201ENST00000269468 GPATCH3Q96I76 525 aa17.02■□□□□ 0.31
MBD1-201ENST00000269468 ST7Q9NRC1 585 aa17.02■□□□□ 0.31
MBD1-201ENST00000269468 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.31
MBD1-201ENST00000269468 TTC41PQ6P2S7 1318 aa17.02■□□□□ 0.31
MBD1-201ENST00000269468 PEAK1Q9H792 1746 aa17.01■□□□□ 0.31
MBD1-201ENST00000269468 H3BQV1 296 aa17.01■□□□□ 0.31
MBD1-201ENST00000269468 GABPB1Q06547 395 aaPredicted RBP17.01■□□□□ 0.31
MBD1-201ENST00000269468 IFFO2Q5TF58 517 aa17.01■□□□□ 0.31
MBD1-201ENST00000269468 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.01■□□□□ 0.31
MBD1-201ENST00000269468 BOLA2Q9H3K6 86 aa17.01■□□□□ 0.31
MBD1-201ENST00000269468 C9orf78Q9NZ63 289 aaPredicted RBP17.01■□□□□ 0.31
MBD1-201ENST00000269468 C3P01024 1663 aa17.01■□□□□ 0.31
MBD1-201ENST00000269468 PSMA5P28066 241 aa17.01■□□□□ 0.31
MBD1-201ENST00000269468 SYCP1Q15431 976 aa17.01■□□□□ 0.31
MBD1-201ENST00000269468 MON2Q7Z3U7 1717 aa17.01■□□□□ 0.31
MBD1-201ENST00000269468 RIMBP3CA6NJZ7 1639 aa17.01■□□□□ 0.31
MBD1-201ENST00000269468 RIMBP3BA6NNM3 1639 aa17.01■□□□□ 0.31
MBD1-201ENST00000269468 RIMBP3Q9UFD9 1639 aa17.01■□□□□ 0.31
MBD1-201ENST00000269468 MAP3K5Q99683 1374 aa17.01■□□□□ 0.31
MBD1-201ENST00000269468 HSP90B1P14625 803 aaKnown RBP17.01■□□□□ 0.31
MBD1-201ENST00000269468 KRT222Q8N1A0 295 aa17.01■□□□□ 0.31
MBD1-201ENST00000269468 EVI5LQ96CN4 794 aa17■□□□□ 0.31
MBD1-201ENST00000269468 FSD1Q9BTV5 496 aa17■□□□□ 0.31
MBD1-201ENST00000269468 MORC2Q9Y6X9 1032 aaPredicted RBP17■□□□□ 0.31
MBD1-201ENST00000269468 XRN1Q8IZH2 1706 aaKnown RBP17■□□□□ 0.31
MBD1-201ENST00000269468 A0A0D9SFI3 127 aa17■□□□□ 0.31
MBD1-201ENST00000269468 BRF1Q92994 677 aa17■□□□□ 0.31
MBD1-201ENST00000269468 SIL1Q9H173 461 aa17■□□□□ 0.31
MBD1-201ENST00000269468 OVOS2A0A0J9YW53 1432 aa17■□□□□ 0.31
MBD1-201ENST00000269468 OVOS2Q6IE36 1432 aa17■□□□□ 0.31
MBD1-201ENST00000269468 CCDC69A6NI79 296 aa16.99■□□□□ 0.31
MBD1-201ENST00000269468 FBXO38Q6PIJ6 1188 aa16.99■□□□□ 0.31
MBD1-201ENST00000269468 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
MBD1-201ENST00000269468 ZNF397Q8NF99 534 aaPredicted RBP16.99■□□□□ 0.31
MBD1-201ENST00000269468 FTOQ9C0B1 505 aaKnown RBP eCLIP16.99■□□□□ 0.31
MBD1-201ENST00000269468 CEP170BQ9Y4F5 1589 aaPredicted RBP16.99■□□□□ 0.31
MBD1-201ENST00000269468 BEND3Q5T5X7 828 aa16.99■□□□□ 0.31
MBD1-201ENST00000269468 ITSN1Q15811 1721 aa16.99■□□□□ 0.31
MBD1-201ENST00000269468 TERF2Q15554 542 aa16.99■□□□□ 0.31
MBD1-201ENST00000269468 MAP4K1Q92918 833 aa16.99■□□□□ 0.31
MBD1-201ENST00000269468 LRRC2Q9BYS8 371 aa16.99■□□□□ 0.31
MBD1-201ENST00000269468 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.99■□□□□ 0.31
MBD1-201ENST00000269468 MAPK8IP2Q13387 824 aaPredicted RBP16.98■□□□□ 0.31
MBD1-201ENST00000269468 TOB2Q14106 344 aaPredicted RBP16.98■□□□□ 0.31
MBD1-201ENST00000269468 FLT4P35916 1363 aa16.98■□□□□ 0.31
MBD1-201ENST00000269468 KCNQ3O43525 872 aa16.98■□□□□ 0.31
MBD1-201ENST00000269468 RPS6KB1P23443 525 aa16.98■□□□□ 0.31
MBD1-201ENST00000269468 RNF20Q5VTR2 975 aa16.98■□□□□ 0.31
MBD1-201ENST00000269468 IGSF1Q8N6C5 1336 aa16.97■□□□□ 0.31
MBD1-201ENST00000269468 FGD1P98174 961 aa16.97■□□□□ 0.31
MBD1-201ENST00000269468 ROBO2Q9HCK4 1378 aa16.97■□□□□ 0.31
MBD1-201ENST00000269468 EDC3Q96F86 508 aaKnown RBP16.97■□□□□ 0.31
MBD1-201ENST00000269468 TLR7Q9NYK1 1049 aaKnown RBP16.97■□□□□ 0.31
MBD1-201ENST00000269468 NLRP6P59044 892 aa16.97■□□□□ 0.31
MBD1-201ENST00000269468 CWF19L2Q2TBE0 894 aaKnown RBP16.97■□□□□ 0.31
MBD1-201ENST00000269468 KLHL34Q8N239 644 aa16.97■□□□□ 0.31
MBD1-201ENST00000269468 IQCB1Q15051 598 aa16.96■□□□□ 0.31
MBD1-201ENST00000269468 ANKRD1Q15327 319 aa16.96■□□□□ 0.31
MBD1-201ENST00000269468 RBM43Q6ZSC3 357 aaKnown RBP16.96■□□□□ 0.31
MBD1-201ENST00000269468 NAP1L2Q9ULW6 460 aaPredicted RBP16.96■□□□□ 0.31
MBD1-201ENST00000269468 NEO1Q92859 1461 aa16.96■□□□□ 0.31
MBD1-201ENST00000269468 USP6P35125 1406 aa16.96■□□□□ 0.31
MBD1-201ENST00000269468 TAF3Q5VWG9 929 aa16.96■□□□□ 0.31
MBD1-201ENST00000269468 C14orf37Q86TY3 774 aa16.96■□□□□ 0.31
MBD1-201ENST00000269468 ZNF589Q86UQ0 364 aaPredicted RBP16.96■□□□□ 0.31
MBD1-201ENST00000269468 CCAR1Q8IX12 1150 aaKnown RBP16.96■□□□□ 0.31
MBD1-201ENST00000269468 VGLL3A8MV65 326 aa16.95■□□□□ 0.3
MBD1-201ENST00000269468 KCNB2Q92953 911 aa16.95■□□□□ 0.3
MBD1-201ENST00000269468 EAF2Q96CJ1 260 aaPredicted RBP16.95■□□□□ 0.3
MBD1-201ENST00000269468 TRERF1Q96PN7 1200 aa16.95■□□□□ 0.3
MBD1-201ENST00000269468 HTATSF1O43719 755 aaKnown RBP16.95■□□□□ 0.3
MBD1-201ENST00000269468 SBNO1A3KN83 1393 aa16.95■□□□□ 0.3
MBD1-201ENST00000269468 FAM208AQ9UK61 1670 aaKnown RBP16.95■□□□□ 0.3
MBD1-201ENST00000269468 GORABQ5T7V8 394 aa16.95■□□□□ 0.3
MBD1-201ENST00000269468 LGR6Q9HBX8 967 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms