RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 ST5P78524 1137 aa13.46□□□□□ -0.25
SYCP3-201ENST00000266743 DGKZQ13574 1117 aa13.46□□□□□ -0.25
SYCP3-201ENST00000266743 SLC51AQ86UW1 340 aa13.46□□□□□ -0.25
SYCP3-201ENST00000266743 VSIG10Q8N0Z9 540 aa13.46□□□□□ -0.25
SYCP3-201ENST00000266743 ZNF496Q96IT1 587 aaPredicted RBP13.46□□□□□ -0.25
SYCP3-201ENST00000266743 ADAMTSL1Q8N6G6 1762 aa13.45□□□□□ -0.26
SYCP3-201ENST00000266743 FAM177BA6PVY3 158 aa13.45□□□□□ -0.26
SYCP3-201ENST00000266743 FZD9O00144 591 aa13.45□□□□□ -0.26
SYCP3-201ENST00000266743 EPS15P42566 896 aa13.45□□□□□ -0.26
SYCP3-201ENST00000266743 ECE1P42892 770 aa13.45□□□□□ -0.26
SYCP3-201ENST00000266743 MTHFSDQ2M296 383 aaKnown RBP13.45□□□□□ -0.26
SYCP3-201ENST00000266743 SYNE4Q8N205 404 aa13.45□□□□□ -0.26
SYCP3-201ENST00000266743 TNRC18O15417 2968 aaPredicted RBP13.44□□□□□ -0.26
SYCP3-201ENST00000266743 IARSP41252 1262 aaKnown RBP13.44□□□□□ -0.26
SYCP3-201ENST00000266743 SOX10P56693 466 aa13.44□□□□□ -0.26
SYCP3-201ENST00000266743 MRC1P22897 1456 aa13.43□□□□□ -0.26
SYCP3-201ENST00000266743 CHRM1P11229 460 aaPredicted RBP13.43□□□□□ -0.26
SYCP3-201ENST00000266743 MORC1Q86VD1 984 aa13.43□□□□□ -0.26
SYCP3-201ENST00000266743 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
SYCP3-201ENST00000266743 TTC5Q8N0Z6 440 aa13.43□□□□□ -0.26
SYCP3-201ENST00000266743 GPC2Q8N158 579 aa13.43□□□□□ -0.26
SYCP3-201ENST00000266743 ZIC5Q96T25 663 aa13.43□□□□□ -0.26
SYCP3-201ENST00000266743 PANK3Q9H999 370 aa13.43□□□□□ -0.26
SYCP3-201ENST00000266743 TLL2Q9Y6L7 1015 aa13.43□□□□□ -0.26
SYCP3-201ENST00000266743 SCN4AP35499 1836 aa13.43□□□□□ -0.26
SYCP3-201ENST00000266743 NPR1P16066 1061 aa13.42□□□□□ -0.26
SYCP3-201ENST00000266743 SCNN1DP51172 638 aa13.42□□□□□ -0.26
SYCP3-201ENST00000266743 SCN11AQ9UI33 1791 aa13.42□□□□□ -0.26
SYCP3-201ENST00000266743 COL4A5P29400 1685 aa13.41□□□□□ -0.26
SYCP3-201ENST00000266743 KCNQ3O43525 872 aa13.41□□□□□ -0.26
SYCP3-201ENST00000266743 IL6STP40189 918 aaPredicted RBP13.41□□□□□ -0.26
SYCP3-201ENST00000266743 CIAPIN1Q6FI81 312 aa13.41□□□□□ -0.26
SYCP3-201ENST00000266743 DZIP3Q86Y13 1208 aaKnown RBP13.41□□□□□ -0.26
SYCP3-201ENST00000266743 LTBP1Q14766 1721 aa13.41□□□□□ -0.26
SYCP3-201ENST00000266743 CELF2O95319 508 aaKnown RBP13.4□□□□□ -0.26
SYCP3-201ENST00000266743 LMOD1P29536 600 aaPredicted RBP13.4□□□□□ -0.26
SYCP3-201ENST00000266743 MAP2K2P36507 400 aa13.4□□□□□ -0.26
SYCP3-201ENST00000266743 RTKN2Q8IZC4 609 aa13.4□□□□□ -0.26
SYCP3-201ENST00000266743 HEG1Q9ULI3 1381 aa13.4□□□□□ -0.26
SYCP3-201ENST00000266743 CACNA1SQ13698 1873 aa13.4□□□□□ -0.26
SYCP3-201ENST00000266743 THSD7BQ9C0I4 1608 aa13.39□□□□□ -0.27
SYCP3-201ENST00000266743 PRAMEF22A3QJZ6 481 aa13.39□□□□□ -0.27
SYCP3-201ENST00000266743 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
SYCP3-201ENST00000266743 ZNF790Q6PG37 636 aa13.39□□□□□ -0.27
SYCP3-201ENST00000266743 SAPCD2Q86UD0 394 aa13.39□□□□□ -0.27
SYCP3-201ENST00000266743 JDP2Q8WYK2 163 aa13.39□□□□□ -0.27
SYCP3-201ENST00000266743 ZNF408Q9H9D4 720 aa13.39□□□□□ -0.27
SYCP3-201ENST00000266743 SCN7AQ01118 1682 aa13.38□□□□□ -0.27
SYCP3-201ENST00000266743 KLRG2A4D1S0 409 aaPredicted RBP13.38□□□□□ -0.27
SYCP3-201ENST00000266743 TCERG1O14776 1098 aaKnown RBP13.38□□□□□ -0.27
SYCP3-201ENST00000266743 DLK2Q6UY11 383 aa13.38□□□□□ -0.27
SYCP3-201ENST00000266743 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
SYCP3-201ENST00000266743 NPM2Q86SE8 214 aaKnown RBP13.38□□□□□ -0.27
SYCP3-201ENST00000266743 IFNL1Q8IU54 200 aa13.38□□□□□ -0.27
SYCP3-201ENST00000266743 IL17REQ8NFR9 667 aa13.38□□□□□ -0.27
SYCP3-201ENST00000266743 GLIS2Q9BZE0 524 aaPredicted RBP13.38□□□□□ -0.27
SYCP3-201ENST00000266743 USP16Q9Y5T5 823 aa13.37□□□□□ -0.27
SYCP3-201ENST00000266743 PDE4DIPQ5VU43 2346 aa13.36□□□□□ -0.27
SYCP3-201ENST00000266743 CASP8AP2Q9UKL3 1982 aa13.36□□□□□ -0.27
SYCP3-201ENST00000266743 BRPF1P55201 1214 aaPredicted RBP13.36□□□□□ -0.27
SYCP3-201ENST00000266743 LARGE2Q8N3Y3 721 aa13.36□□□□□ -0.27
SYCP3-201ENST00000266743 TEX13AQ9BXU3 409 aaPredicted RBP13.36□□□□□ -0.27
SYCP3-201ENST00000266743 NIP7Q9Y221 180 aaKnown RBP eCLIP13.36□□□□□ -0.27
SYCP3-201ENST00000266743 CA12O43570 354 aa13.35□□□□□ -0.27
SYCP3-201ENST00000266743 TEFQ10587 303 aa13.35□□□□□ -0.27
SYCP3-201ENST00000266743 USP50Q70EL3 339 aaPredicted RBP13.35□□□□□ -0.27
SYCP3-201ENST00000266743 PSMD1Q99460 953 aa13.35□□□□□ -0.27
SYCP3-201ENST00000266743 SNED1Q8TER0 1413 aa13.35□□□□□ -0.27
SYCP3-201ENST00000266743 TIE1P35590 1138 aa13.34□□□□□ -0.27
SYCP3-201ENST00000266743 PRPF38BQ5VTL8 546 aaKnown RBP13.34□□□□□ -0.27
SYCP3-201ENST00000266743 TPTE2Q6XPS3 522 aa13.34□□□□□ -0.27
SYCP3-201ENST00000266743 NUTM1Q86Y26 1132 aa13.34□□□□□ -0.27
SYCP3-201ENST00000266743 FMNL2Q96PY5 1086 aa13.34□□□□□ -0.27
SYCP3-201ENST00000266743 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
SYCP3-201ENST00000266743 ALDH1B1P30837 517 aa13.33□□□□□ -0.28
SYCP3-201ENST00000266743 HLFQ16534 295 aa13.33□□□□□ -0.28
SYCP3-201ENST00000266743 ABCC12Q96J65 1359 aa13.32□□□□□ -0.28
SYCP3-201ENST00000266743 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
SYCP3-201ENST00000266743 ARFGEF2Q9Y6D5 1785 aa13.32□□□□□ -0.28
SYCP3-201ENST00000266743 SHTN1A0MZ66 631 aa13.32□□□□□ -0.28
SYCP3-201ENST00000266743 GTF2E1P29083 439 aaPredicted RBP13.32□□□□□ -0.28
SYCP3-201ENST00000266743 HIRAP54198 1017 aaPredicted RBP13.32□□□□□ -0.28
SYCP3-201ENST00000266743 ADARB2Q9NS39 739 aaKnown RBP13.32□□□□□ -0.28
SYCP3-201ENST00000266743 GPRC5DQ9NZD1 345 aa13.32□□□□□ -0.28
SYCP3-201ENST00000266743 NBPF26B4DH59 902 aa13.31□□□□□ -0.28
SYCP3-201ENST00000266743 GMPSP49915 693 aaPredicted RBP13.31□□□□□ -0.28
SYCP3-201ENST00000266743 AOC3Q16853 763 aa13.31□□□□□ -0.28
SYCP3-201ENST00000266743 NBPF10Q6P3W6 841 aaKnown RBP13.31□□□□□ -0.28
SYCP3-201ENST00000266743 CLEC4GQ6UXB4 293 aa13.31□□□□□ -0.28
SYCP3-201ENST00000266743 NIM1KQ8IY84 436 aa13.31□□□□□ -0.28
SYCP3-201ENST00000266743 NBPF15Q8N660 670 aa13.31□□□□□ -0.28
SYCP3-201ENST00000266743 TRPM4Q8TD43 1214 aa13.31□□□□□ -0.28
SYCP3-201ENST00000266743 ZNF652Q9Y2D9 606 aa13.31□□□□□ -0.28
SYCP3-201ENST00000266743 BTBD11A6QL63 1104 aa13.3□□□□□ -0.28
SYCP3-201ENST00000266743 GNAT3A8MTJ3 354 aa13.3□□□□□ -0.28
SYCP3-201ENST00000266743 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
SYCP3-201ENST00000266743 PPIP5K2O43314 1243 aa13.3□□□□□ -0.28
SYCP3-201ENST00000266743 HUNKP57058 714 aa13.3□□□□□ -0.28
SYCP3-201ENST00000266743 CXCL9Q07325 125 aa13.3□□□□□ -0.28
SYCP3-201ENST00000266743 ASTLQ6HA08 431 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms