RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 CCDC191Q8NCU4 936 aa10.28□□□□□ -0.76
COPS4-201ENST00000264389 DDX60Q8IY21 1712 aaKnown RBP10.28□□□□□ -0.76
COPS4-201ENST00000264389 SURF6O75683 361 aaKnown RBP10.27□□□□□ -0.76
COPS4-201ENST00000264389 HSP90AB4PQ58FF6 505 aa10.27□□□□□ -0.76
COPS4-201ENST00000264389 HSP90AB3PQ58FF7 597 aa10.27□□□□□ -0.76
COPS4-201ENST00000264389 DZIP3Q86Y13 1208 aaKnown RBP10.27□□□□□ -0.76
COPS4-201ENST00000264389 KAZALD1Q96I82 304 aa10.27□□□□□ -0.76
COPS4-201ENST00000264389 RAB11FIP3O75154 756 aa10.27□□□□□ -0.77
COPS4-201ENST00000264389 OS9Q13438 667 aaPredicted RBP10.27□□□□□ -0.77
COPS4-201ENST00000264389 TCIRG1Q13488 830 aa10.27□□□□□ -0.77
COPS4-201ENST00000264389 GIGYF2Q6Y7W6 1299 aaKnown RBP10.27□□□□□ -0.77
COPS4-201ENST00000264389 ISCA1Q9BUE6 129 aa10.27□□□□□ -0.77
COPS4-201ENST00000264389 SPEF2Q9C093 1822 aa10.27□□□□□ -0.77
COPS4-201ENST00000264389 UBR3Q6ZT12 1888 aa10.26□□□□□ -0.77
COPS4-201ENST00000264389 COL24A1Q17RW2 1714 aa10.26□□□□□ -0.77
COPS4-201ENST00000264389 CASP7P55210 303 aa10.26□□□□□ -0.77
COPS4-201ENST00000264389 BMP2KLQ5H9B9 411 aa10.26□□□□□ -0.77
COPS4-201ENST00000264389 INTS5Q6P9B9 1019 aaKnown RBP10.26□□□□□ -0.77
COPS4-201ENST00000264389 PTF1AQ7RTS3 328 aa10.26□□□□□ -0.77
COPS4-201ENST00000264389 PLEKHM2Q8IWE5 1019 aa10.26□□□□□ -0.77
COPS4-201ENST00000264389 JARID2Q92833 1246 aaPredicted RBP10.26□□□□□ -0.77
COPS4-201ENST00000264389 CNTNAP4Q9C0A0 1308 aa10.26□□□□□ -0.77
COPS4-201ENST00000264389 TNS1Q9HBL0 1735 aaKnown RBP10.25□□□□□ -0.77
COPS4-201ENST00000264389 ERVV-1B6SEH8 477 aa10.25□□□□□ -0.77
COPS4-201ENST00000264389 H7C1W4 665 aa10.25□□□□□ -0.77
COPS4-201ENST00000264389 EIF5P55010 431 aaKnown RBP10.25□□□□□ -0.77
COPS4-201ENST00000264389 LINC00116Q8NCU8 138 aa10.25□□□□□ -0.77
COPS4-201ENST00000264389 KIF1BPQ96EK5 621 aa10.25□□□□□ -0.77
COPS4-201ENST00000264389 RBM6P78332 1123 aaKnown RBP10.24□□□□□ -0.77
COPS4-201ENST00000264389 HLFQ16534 295 aa10.24□□□□□ -0.77
COPS4-201ENST00000264389 RABL6Q3YEC7 729 aaPredicted RBP10.24□□□□□ -0.77
COPS4-201ENST00000264389 RTL5Q5HYW3 569 aaPredicted RBP10.24□□□□□ -0.77
COPS4-201ENST00000264389 EPHA10Q5JZY3 1008 aa10.24□□□□□ -0.77
COPS4-201ENST00000264389 KRT27Q7Z3Y8 459 aa10.24□□□□□ -0.77
COPS4-201ENST00000264389 ERC1Q8IUD2 1116 aa10.24□□□□□ -0.77
COPS4-201ENST00000264389 C16orf71Q8IYS4 520 aaPredicted RBP10.24□□□□□ -0.77
COPS4-201ENST00000264389 RHPN1Q8TCX5 695 aa10.24□□□□□ -0.77
COPS4-201ENST00000264389 CCNL1Q9UK58 526 aaPredicted RBP10.24□□□□□ -0.77
COPS4-201ENST00000264389 TBC1D2BQ9UPU7 963 aa10.24□□□□□ -0.77
COPS4-201ENST00000264389 NOP58Q9Y2X3 529 aaKnown RBP10.24□□□□□ -0.77
COPS4-201ENST00000264389 GPTP24298 496 aa10.24□□□□□ -0.77
COPS4-201ENST00000264389 ANP32AP39687 249 aaKnown RBP10.24□□□□□ -0.77
COPS4-201ENST00000264389 TRIM28Q13263 835 aaKnown RBP10.24□□□□□ -0.77
COPS4-201ENST00000264389 TTC22Q5TAA0 569 aa10.24□□□□□ -0.77
COPS4-201ENST00000264389 OTUD7AQ8TE49 926 aaPredicted RBP10.24□□□□□ -0.77
COPS4-201ENST00000264389 IL1RAPL2Q9NP60 686 aa10.24□□□□□ -0.77
COPS4-201ENST00000264389 PA2G4Q9UQ80 394 aaKnown RBP10.24□□□□□ -0.77
COPS4-201ENST00000264389 CHMP3Q9Y3E7 222 aa10.24□□□□□ -0.77
COPS4-201ENST00000264389 RGPD3A6NKT7 1758 aaPredicted RBP10.24□□□□□ -0.77
COPS4-201ENST00000264389 RGPD4Q7Z3J3 1758 aa10.24□□□□□ -0.77
COPS4-201ENST00000264389 PCCAP05165 728 aaPredicted RBP10.23□□□□□ -0.77
COPS4-201ENST00000264389 MX1P20591 662 aa10.23□□□□□ -0.77
COPS4-201ENST00000264389 G3BP1Q13283 466 aaKnown RBP eCLIP10.23□□□□□ -0.77
COPS4-201ENST00000264389 FAM196AQ6ZSG2 479 aa10.23□□□□□ -0.77
COPS4-201ENST00000264389 BCL11BQ9C0K0 894 aaPredicted RBP10.23□□□□□ -0.77
COPS4-201ENST00000264389 SALL3Q9BXA9 1300 aa10.23□□□□□ -0.77
COPS4-201ENST00000264389 CDHR2Q9BYE9 1310 aa10.23□□□□□ -0.77
COPS4-201ENST00000264389 GSPT1P15170 499 aaKnown RBP10.22□□□□□ -0.77
COPS4-201ENST00000264389 KCNQ4P56696 695 aa10.22□□□□□ -0.77
COPS4-201ENST00000264389 LMBR1LQ6UX01 489 aa10.22□□□□□ -0.77
COPS4-201ENST00000264389 NLRP10Q86W26 655 aa10.22□□□□□ -0.77
COPS4-201ENST00000264389 ZBTB38Q8NAP3 1195 aaPredicted RBP10.22□□□□□ -0.77
COPS4-201ENST00000264389 UPF2Q9HAU5 1272 aaKnown RBP10.22□□□□□ -0.77
COPS4-201ENST00000264389 ZNF652Q9Y2D9 606 aa10.22□□□□□ -0.77
COPS4-201ENST00000264389 AOX1Q06278 1338 aa10.22□□□□□ -0.77
COPS4-201ENST00000264389 CAMTA2O94983 1202 aa10.21□□□□□ -0.77
COPS4-201ENST00000264389 PDE1AP54750 535 aa10.21□□□□□ -0.77
COPS4-201ENST00000264389 FOXO4P98177 505 aa10.21□□□□□ -0.77
COPS4-201ENST00000264389 CLASRPQ8N2M8 674 aaKnown RBP10.21□□□□□ -0.77
COPS4-201ENST00000264389 SIL1Q9H173 461 aa10.21□□□□□ -0.77
COPS4-201ENST00000264389 OSBPL3Q9H4L5 887 aa10.21□□□□□ -0.77
COPS4-201ENST00000264389 LRP5O75197 1615 aa10.21□□□□□ -0.77
COPS4-201ENST00000264389 A0A1B0GUL6 1792 aa10.21□□□□□ -0.78
COPS4-201ENST00000264389 RC3H1Q5TC82 1133 aaKnown RBP10.21□□□□□ -0.78
COPS4-201ENST00000264389 ZNF34Q8IZ26 560 aa10.21□□□□□ -0.78
COPS4-201ENST00000264389 KLHDC4Q8TBB5 520 aa10.21□□□□□ -0.78
COPS4-201ENST00000264389 FAM89AQ96GI7 184 aa10.21□□□□□ -0.78
COPS4-201ENST00000264389 COPRSQ9NQ92 184 aa10.21□□□□□ -0.78
COPS4-201ENST00000264389 UBN2Q6ZU65 1347 aa10.21□□□□□ -0.78
COPS4-201ENST00000264389 GNPATO15228 680 aa10.2□□□□□ -0.78
COPS4-201ENST00000264389 CDC45O75419 566 aa10.2□□□□□ -0.78
COPS4-201ENST00000264389 RFX5P48382 616 aaPredicted RBP10.2□□□□□ -0.78
COPS4-201ENST00000264389 NUTM1Q86Y26 1132 aa10.2□□□□□ -0.78
COPS4-201ENST00000264389 PLA2G12BQ9BX93 195 aa10.2□□□□□ -0.78
COPS4-201ENST00000264389 TRMT112Q9UI30 125 aaKnown RBP10.2□□□□□ -0.78
COPS4-201ENST00000264389 ARAP2Q8WZ64 1704 aa10.2□□□□□ -0.78
COPS4-201ENST00000264389 SPDYE4A6NLX3 237 aa10.19□□□□□ -0.78
COPS4-201ENST00000264389 RXRBP28702 533 aa10.19□□□□□ -0.78
COPS4-201ENST00000264389 PTPN12Q05209 780 aaKnown RBP10.19□□□□□ -0.78
COPS4-201ENST00000264389 PARP10Q53GL7 1025 aa10.19□□□□□ -0.78
COPS4-201ENST00000264389 TSHZ3Q63HK5 1081 aa10.19□□□□□ -0.78
COPS4-201ENST00000264389 FBXO41Q8TF61 875 aa10.19□□□□□ -0.78
COPS4-201ENST00000264389 GPATCH3Q96I76 525 aa10.19□□□□□ -0.78
COPS4-201ENST00000264389 STAP2Q9UGK3 403 aa10.19□□□□□ -0.78
COPS4-201ENST00000264389 RPS6KA4O75676 772 aa10.19□□□□□ -0.78
COPS4-201ENST00000264389 SASH1O94885 1247 aa10.19□□□□□ -0.78
COPS4-201ENST00000264389 TRIM37O94972 964 aa10.19□□□□□ -0.78
COPS4-201ENST00000264389 SEC24BO95487 1268 aa10.19□□□□□ -0.78
COPS4-201ENST00000264389 IFIT2P09913 472 aaKnown RBP10.19□□□□□ -0.78
COPS4-201ENST00000264389 MFAP1P55081 439 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms