RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.97■□□□□ 0.63
GPC1-201ENST00000264039 PTPRCP08575 1304 aa18.97■□□□□ 0.63
GPC1-201ENST00000264039 RBM6P78332 1123 aaKnown RBP18.97■□□□□ 0.63
GPC1-201ENST00000264039 LMOD2Q6P5Q4 547 aa18.97■□□□□ 0.63
GPC1-201ENST00000264039 PLEKHA4Q9H4M7 779 aa18.97■□□□□ 0.63
GPC1-201ENST00000264039 PA2G4Q9UQ80 394 aaKnown RBP18.97■□□□□ 0.63
GPC1-201ENST00000264039 ST5P78524 1137 aa18.96■□□□□ 0.63
GPC1-201ENST00000264039 ATP8B2P98198 1209 aa18.96■□□□□ 0.63
GPC1-201ENST00000264039 ADGBQ8N7X0 1667 aa18.96■□□□□ 0.63
GPC1-201ENST00000264039 SHANK2Q9UPX8 1470 aa18.96■□□□□ 0.63
GPC1-201ENST00000264039 CCDC12Q8WUD4 166 aaPredicted RBP18.96■□□□□ 0.63
GPC1-201ENST00000264039 RGS12O14924 1447 aa18.96■□□□□ 0.63
GPC1-201ENST00000264039 TOP1P11387 765 aaKnown RBP18.96■□□□□ 0.63
GPC1-201ENST00000264039 TPCN1Q9ULQ1 816 aa18.96■□□□□ 0.63
GPC1-201ENST00000264039 KIAA0556O60303 1618 aa18.95■□□□□ 0.62
GPC1-201ENST00000264039 JAKMIP3Q5VZ66 844 aa18.95■□□□□ 0.62
GPC1-201ENST00000264039 ESF1Q9H501 851 aaKnown RBP18.95■□□□□ 0.62
GPC1-201ENST00000264039 ANKRD1Q15327 319 aa18.95■□□□□ 0.62
GPC1-201ENST00000264039 TXNDC2Q86VQ3 553 aa18.94■□□□□ 0.62
GPC1-201ENST00000264039 SMARCE1Q969G3 411 aa18.94■□□□□ 0.62
GPC1-201ENST00000264039 FAM227BQ96M60 508 aa18.94■□□□□ 0.62
GPC1-201ENST00000264039 HSP90AB4PQ58FF6 505 aa18.94■□□□□ 0.62
GPC1-201ENST00000264039 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.94■□□□□ 0.62
GPC1-201ENST00000264039 ZNF396Q96N95 335 aaPredicted RBP18.94■□□□□ 0.62
GPC1-201ENST00000264039 XPO4Q9C0E2 1151 aaKnown RBP18.94■□□□□ 0.62
GPC1-201ENST00000264039 HYPKQ9NX55 129 aa18.94■□□□□ 0.62
GPC1-201ENST00000264039 GRIN2AQ12879 1464 aa18.94■□□□□ 0.62
GPC1-201ENST00000264039 MYO1CO00159 1063 aa18.94■□□□□ 0.62
GPC1-201ENST00000264039 MNAT1P51948 309 aa18.94■□□□□ 0.62
GPC1-201ENST00000264039 TTC31Q49AM3 519 aaPredicted RBP18.94■□□□□ 0.62
GPC1-201ENST00000264039 HSP90AB2PQ58FF8 381 aa18.94■□□□□ 0.62
GPC1-201ENST00000264039 FEZ2Q9UHY8 353 aaPredicted RBP18.94■□□□□ 0.62
GPC1-201ENST00000264039 RHOXF2BP0C7M4 288 aa18.93■□□□□ 0.62
GPC1-201ENST00000264039 CHST3Q7LGC8 479 aa18.93■□□□□ 0.62
GPC1-201ENST00000264039 RHOXF2Q9BQY4 288 aa18.93■□□□□ 0.62
GPC1-201ENST00000264039 NSD2O96028 1365 aa18.93■□□□□ 0.62
GPC1-201ENST00000264039 CREB3L3Q68CJ9 461 aa18.93■□□□□ 0.62
GPC1-201ENST00000264039 MICALL1Q8N3F8 863 aa18.93■□□□□ 0.62
GPC1-201ENST00000264039 KIF4BQ2VIQ3 1234 aa18.92■□□□□ 0.62
GPC1-201ENST00000264039 OLFM4Q6UX06 510 aa18.92■□□□□ 0.62
GPC1-201ENST00000264039 SLC3A2P08195 630 aaKnown RBP18.92■□□□□ 0.62
GPC1-201ENST00000264039 UBASH3AP57075 661 aa18.92■□□□□ 0.62
GPC1-201ENST00000264039 AKAP17AQ02040 695 aaKnown RBP18.92■□□□□ 0.62
GPC1-201ENST00000264039 VPS53Q5VIR6 699 aa18.92■□□□□ 0.62
GPC1-201ENST00000264039 NEUROD6Q96NK8 337 aa18.92■□□□□ 0.62
GPC1-201ENST00000264039 SART3Q15020 963 aaKnown RBP18.91■□□□□ 0.62
GPC1-201ENST00000264039 LZTFL1Q9NQ48 299 aa18.91■□□□□ 0.62
GPC1-201ENST00000264039 TRAPPC8Q9Y2L5 1435 aa18.91■□□□□ 0.62
GPC1-201ENST00000264039 CCP110O43303 1012 aa18.91■□□□□ 0.62
GPC1-201ENST00000264039 LRRN4CLQ8ND94 238 aa18.91■□□□□ 0.62
GPC1-201ENST00000264039 CENPHQ9H3R5 247 aa18.91■□□□□ 0.62
GPC1-201ENST00000264039 SETQ01105 290 aaPredicted RBP18.91■□□□□ 0.62
GPC1-201ENST00000264039 OTUD7BQ6GQQ9 843 aa18.91■□□□□ 0.62
GPC1-201ENST00000264039 PBRM1Q86U86 1689 aa18.91■□□□□ 0.62
GPC1-201ENST00000264039 EIF3JO75822 258 aaKnown RBP18.9■□□□□ 0.62
GPC1-201ENST00000264039 ECHDC1Q9NTX5 307 aa18.9■□□□□ 0.62
GPC1-201ENST00000264039 TDRD7Q8NHU6 1098 aaKnown RBP18.9■□□□□ 0.62
GPC1-201ENST00000264039 NDUFB9Q9Y6M9 179 aa18.9■□□□□ 0.62
GPC1-201ENST00000264039 PPARDQ03181 441 aa18.9■□□□□ 0.62
GPC1-201ENST00000264039 GDAP1L1Q96MZ0 367 aa18.9■□□□□ 0.62
GPC1-201ENST00000264039 KDM5AP29375 1690 aaKnown RBP18.9■□□□□ 0.62
GPC1-201ENST00000264039 PATL2C9JE40 543 aaKnown RBP18.89■□□□□ 0.62
GPC1-201ENST00000264039 NMIQ13287 307 aaPredicted RBP18.89■□□□□ 0.62
GPC1-201ENST00000264039 PHAXQ9H814 394 aaKnown RBP18.89■□□□□ 0.62
GPC1-201ENST00000264039 LOC102724159A0A0B4J2E5 919 aa18.89■□□□□ 0.61
GPC1-201ENST00000264039 MARCKSP29966 332 aaPredicted RBP18.89■□□□□ 0.61
GPC1-201ENST00000264039 PWP2Q15269 919 aaKnown RBP18.89■□□□□ 0.61
GPC1-201ENST00000264039 HSP90AB3PQ58FF7 597 aa18.89■□□□□ 0.61
GPC1-201ENST00000264039 TMEM87AQ8NBN3 555 aa18.89■□□□□ 0.61
GPC1-201ENST00000264039 ADCY10Q96PN6 1610 aa18.89■□□□□ 0.61
GPC1-201ENST00000264039 RPAP1Q9BWH6 1393 aaPredicted RBP18.89■□□□□ 0.61
GPC1-201ENST00000264039 CTAGE5O15320 804 aa18.89■□□□□ 0.61
GPC1-201ENST00000264039 ZSCAN12O43309 604 aa18.89■□□□□ 0.61
GPC1-201ENST00000264039 PPP2R3AQ06190 1150 aa18.89■□□□□ 0.61
GPC1-201ENST00000264039 CCDC150Q8NCX0 1101 aa18.89■□□□□ 0.61
GPC1-201ENST00000264039 NGDNQ8NEJ9 315 aaKnown RBP18.89■□□□□ 0.61
GPC1-201ENST00000264039 PPP1R13BQ96KQ4 1090 aa18.89■□□□□ 0.61
GPC1-201ENST00000264039 CYP2C19P33261 490 aa18.88■□□□□ 0.61
GPC1-201ENST00000264039 SYCP1Q15431 976 aa18.88■□□□□ 0.61
GPC1-201ENST00000264039 CFAP65Q6ZU64 1925 aaKnown RBP18.88■□□□□ 0.61
GPC1-201ENST00000264039 KLHL10Q6JEL2 608 aa18.88■□□□□ 0.61
GPC1-201ENST00000264039 RRP15Q9Y3B9 282 aaKnown RBP18.88■□□□□ 0.61
GPC1-201ENST00000264039 ADAMTS12P58397 1594 aa18.88■□□□□ 0.61
GPC1-201ENST00000264039 PI4KAP2A4QPH2 592 aa18.88■□□□□ 0.61
GPC1-201ENST00000264039 ERLIN1O75477 346 aa18.88■□□□□ 0.61
GPC1-201ENST00000264039 DHX8Q14562 1220 aaKnown RBP18.88■□□□□ 0.61
GPC1-201ENST00000264039 PI4KAP1Q8N8J0 262 aa18.88■□□□□ 0.61
GPC1-201ENST00000264039 NCOA5Q9HCD5 579 aaKnown RBP18.88■□□□□ 0.61
GPC1-201ENST00000264039 ABCC10Q5T3U5 1492 aa18.87■□□□□ 0.61
GPC1-201ENST00000264039 TPM1P09493 284 aa18.87■□□□□ 0.61
GPC1-201ENST00000264039 IDI1Q13907 227 aa18.87■□□□□ 0.61
GPC1-201ENST00000264039 Q6ZUG5 572 aa18.87■□□□□ 0.61
GPC1-201ENST00000264039 ETF1P62495 437 aaKnown RBP18.87■□□□□ 0.61
GPC1-201ENST00000264039 NOC3LQ8WTT2 800 aaKnown RBP18.87■□□□□ 0.61
GPC1-201ENST00000264039 VIRMAQ69YN4 1812 aaKnown RBP18.87■□□□□ 0.61
GPC1-201ENST00000264039 UGGT1Q9NYU2 1555 aa18.87■□□□□ 0.61
GPC1-201ENST00000264039 DNAAF4Q8WXU2 420 aa18.87■□□□□ 0.61
GPC1-201ENST00000264039 CAVIN2O95810 425 aa18.86■□□□□ 0.61
GPC1-201ENST00000264039 EDC3Q96F86 508 aaKnown RBP18.86■□□□□ 0.61
GPC1-201ENST00000264039 LSG1Q9H089 658 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms