RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 NLRP3Q96P20 1036 aa19.46■□□□□ 0.71
CROCCP3-201ENST00000263511 ALDH1L1O75891 902 aa19.46■□□□□ 0.71
CROCCP3-201ENST00000263511 COPS6Q7L5N1 327 aa19.46■□□□□ 0.71
CROCCP3-201ENST00000263511 KIF5CO60282 957 aa19.46■□□□□ 0.71
CROCCP3-201ENST00000263511 CCDC144CPQ8IYA2 1237 aa19.46■□□□□ 0.71
CROCCP3-201ENST00000263511 MCM5P33992 734 aa19.45■□□□□ 0.7
CROCCP3-201ENST00000263511 UBA7P41226 1012 aa19.45■□□□□ 0.7
CROCCP3-201ENST00000263511 IDEP14735 1019 aa19.45■□□□□ 0.7
CROCCP3-201ENST00000263511 ATP2B3Q16720 1220 aa19.45■□□□□ 0.7
CROCCP3-201ENST00000263511 CCDC178Q5BJE1 867 aa19.45■□□□□ 0.7
CROCCP3-201ENST00000263511 GBP3Q9H0R5 595 aa19.45■□□□□ 0.7
CROCCP3-201ENST00000263511 PPIP5K1Q6PFW1 1433 aa19.45■□□□□ 0.7
CROCCP3-201ENST00000263511 GPATCH8Q9UKJ3 1502 aaKnown RBP19.45■□□□□ 0.7
CROCCP3-201ENST00000263511 STX6O43752 255 aa19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 DDB1Q16531 1140 aa19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 MYCNP04198 464 aaPredicted RBP19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 PTPN14Q15678 1187 aa19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 PPP4R3BQ5MIZ7 849 aa19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 SLC26A6Q9BXS9 759 aa19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 PLCH2O75038 1416 aa19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 USO1O60763 962 aaKnown RBP19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 YEATS4O95619 227 aa19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 SSFA2P28290 1259 aa19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 TRAF1Q13077 416 aa19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 MPHOSPH6Q99547 160 aaKnown RBP19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 LARP6Q9BRS8 491 aaKnown RBP19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 KRT23Q9C075 422 aa19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 STX8Q9UNK0 236 aa19.44■□□□□ 0.7
CROCCP3-201ENST00000263511 ACSBG1Q96GR2 724 aa19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 NUP88Q99567 741 aaPredicted RBP19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 MTIF2P46199 727 aaKnown RBP19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 TDRD12Q587J7 1177 aaKnown RBP19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 LRRC27Q9C0I9 530 aa19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 FBLN1P23142 703 aa19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 CCDC102AQ96A19 550 aa19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 HDAC9Q9UKV0 1011 aa19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 LIG1P18858 919 aa19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 WTAPQ15007 396 aa19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 CKAP2LQ8IYA6 745 aa19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 NBPF7P0C2Y1 421 aaPredicted RBP19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 CYP7A1P22680 504 aa19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 KANK3Q6NY19 840 aa19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 KSR2Q6VAB6 950 aa19.43■□□□□ 0.7
CROCCP3-201ENST00000263511 SLC39A6Q13433 755 aa19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 UQCRHLA0A096LP55 91 aa19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 GRM8O00222 908 aa19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 UQCRHP07919 91 aa19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 IL15P40933 162 aaPredicted RBP19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 ANAPC15P60006 121 aa19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 CCDC40Q4G0X9 1142 aa19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 TMTC2Q8N394 836 aa19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 TBC1D2Q9BYX2 928 aa19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 TFIP11Q9UBB9 837 aaKnown RBP19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 RIMS2Q9UQ26 1411 aa19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 TSHZ3Q63HK5 1081 aa19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 SAMM50Q9Y512 469 aa19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 A2MP01023 1474 aa19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 CLIP2Q9UDT6 1046 aa19.42■□□□□ 0.7
CROCCP3-201ENST00000263511 ZSCAN30Q86W11 494 aa19.41■□□□□ 0.7
CROCCP3-201ENST00000263511 KIF4BQ2VIQ3 1234 aa19.41■□□□□ 0.7
CROCCP3-201ENST00000263511 ESR2Q92731 530 aa19.41■□□□□ 0.7
CROCCP3-201ENST00000263511 CRACR2AQ9BSW2 395 aa19.41■□□□□ 0.7
CROCCP3-201ENST00000263511 TSPY3P0CV98 308 aa19.41■□□□□ 0.7
CROCCP3-201ENST00000263511 TSPY8P0CW00 308 aa19.41■□□□□ 0.7
CROCCP3-201ENST00000263511 SLC4A8Q2Y0W8 1093 aa19.41■□□□□ 0.7
CROCCP3-201ENST00000263511 LMBR1LQ6UX01 489 aa19.41■□□□□ 0.7
CROCCP3-201ENST00000263511 CNNM2Q9H8M5 875 aa19.41■□□□□ 0.7
CROCCP3-201ENST00000263511 NIP7Q9Y221 180 aaKnown RBP eCLIP19.41■□□□□ 0.7
CROCCP3-201ENST00000263511 TCERG1LQ5VWI1 586 aa19.41■□□□□ 0.7
CROCCP3-201ENST00000263511 MEIS3Q99687 375 aa19.41■□□□□ 0.7
CROCCP3-201ENST00000263511 ASXL2Q76L83 1435 aa19.41■□□□□ 0.7
CROCCP3-201ENST00000263511 FAM114A1Q8IWE2 563 aa19.4■□□□□ 0.7
CROCCP3-201ENST00000263511 IL2RBP14784 551 aa19.4■□□□□ 0.7
CROCCP3-201ENST00000263511 SKAP1Q86WV1 359 aa19.4■□□□□ 0.7
CROCCP3-201ENST00000263511 TAF3Q5VWG9 929 aa19.4■□□□□ 0.7
CROCCP3-201ENST00000263511 OGFOD1Q8N543 542 aa19.4■□□□□ 0.7
CROCCP3-201ENST00000263511 TNPO1Q92973 898 aaKnown RBP19.4■□□□□ 0.7
CROCCP3-201ENST00000263511 UTP14AQ9BVJ6 771 aaKnown RBP19.4■□□□□ 0.7
CROCCP3-201ENST00000263511 DUOX2Q9NRD8 1548 aa19.4■□□□□ 0.7
CROCCP3-201ENST00000263511 HDAC1Q13547 482 aaPredicted RBP19.39■□□□□ 0.7
CROCCP3-201ENST00000263511 STX1AQ16623 288 aa19.39■□□□□ 0.7
CROCCP3-201ENST00000263511 CCDC102BQ68D86 513 aa19.39■□□□□ 0.7
CROCCP3-201ENST00000263511 LUZP1Q86V48 1076 aa19.39■□□□□ 0.7
CROCCP3-201ENST00000263511 NYXQ9GZU5 481 aa19.39■□□□□ 0.7
CROCCP3-201ENST00000263511 SLC4A4Q9Y6R1 1079 aa19.39■□□□□ 0.7
CROCCP3-201ENST00000263511 KLF18A0A0U1RQI7 1052 aa19.39■□□□□ 0.69
CROCCP3-201ENST00000263511 KIF18AQ8NI77 898 aa19.39■□□□□ 0.69
CROCCP3-201ENST00000263511 C8orf37Q96NL8 207 aa19.39■□□□□ 0.69
CROCCP3-201ENST00000263511 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.69
CROCCP3-201ENST00000263511 PAFAH1B1P43034 410 aa19.39■□□□□ 0.69
CROCCP3-201ENST00000263511 TRMT1LQ7Z2T5 733 aaKnown RBP19.39■□□□□ 0.69
CROCCP3-201ENST00000263511 RAB11FIP4Q86YS3 637 aa19.39■□□□□ 0.69
CROCCP3-201ENST00000263511 SYCP3Q8IZU3 236 aa19.39■□□□□ 0.69
CROCCP3-201ENST00000263511 TMEM87AQ8NBN3 555 aa19.39■□□□□ 0.69
CROCCP3-201ENST00000263511 BRF1Q92994 677 aa19.39■□□□□ 0.69
CROCCP3-201ENST00000263511 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.39■□□□□ 0.69
CROCCP3-201ENST00000263511 ZSCAN16Q9H4T2 348 aaPredicted RBP19.39■□□□□ 0.69
CROCCP3-201ENST00000263511 PODXL2Q9NZ53 605 aa19.39■□□□□ 0.69
CROCCP3-201ENST00000263511 EIF4A2Q14240 407 aaKnown RBP19.38■□□□□ 0.69
CROCCP3-201ENST00000263511 CPLX3Q8WVH0 158 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms