RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 FERMT2Q96AC1 680 aa20.04■□□□□ 0.8
NOTCH3-201ENST00000263388 TUBB4BP68371 445 aa20.04■□□□□ 0.8
NOTCH3-201ENST00000263388 FERP16591 822 aa20.04■□□□□ 0.8
NOTCH3-201ENST00000263388 KLHL40Q2TBA0 621 aa20.04■□□□□ 0.8
NOTCH3-201ENST00000263388 HSF2BPO75031 334 aa20.03■□□□□ 0.8
NOTCH3-201ENST00000263388 SREK1Q8WXA9 508 aaKnown RBP20.03■□□□□ 0.8
NOTCH3-201ENST00000263388 NOP2P46087 812 aaKnown RBP20.03■□□□□ 0.8
NOTCH3-201ENST00000263388 CCDC184Q52MB2 194 aa20.03■□□□□ 0.8
NOTCH3-201ENST00000263388 TMEM67Q5HYA8 995 aa20.03■□□□□ 0.8
NOTCH3-201ENST00000263388 CCDC102BQ68D86 513 aa20.03■□□□□ 0.8
NOTCH3-201ENST00000263388 SCLT1Q96NL6 688 aa20.03■□□□□ 0.8
NOTCH3-201ENST00000263388 IKBKGQ9Y6K9 419 aa20.03■□□□□ 0.8
NOTCH3-201ENST00000263388 CFAP43Q8NDM7 1665 aa20.03■□□□□ 0.8
NOTCH3-201ENST00000263388 MAPK8IP2Q13387 824 aaPredicted RBP20.03■□□□□ 0.8
NOTCH3-201ENST00000263388 DNA2P51530 1060 aa20.02■□□□□ 0.8
NOTCH3-201ENST00000263388 ARFGAP3Q9NP61 516 aa20.02■□□□□ 0.8
NOTCH3-201ENST00000263388 TMCO5BA8MYB1 307 aa20.02■□□□□ 0.8
NOTCH3-201ENST00000263388 UBA7P41226 1012 aa20.02■□□□□ 0.8
NOTCH3-201ENST00000263388 PIK3R4Q99570 1358 aa20.02■□□□□ 0.8
NOTCH3-201ENST00000263388 METAP2P50579 478 aaKnown RBP eCLIP20.02■□□□□ 0.79
NOTCH3-201ENST00000263388 TBC1D32Q96NH3 1257 aa20.02■□□□□ 0.79
NOTCH3-201ENST00000263388 PRDM10Q9NQV6 1147 aa20.02■□□□□ 0.79
NOTCH3-201ENST00000263388 MFSD6Q6ZSS7 791 aa20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 GPATCH11Q8N954 259 aa20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 TBC1D5Q92609 795 aa20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 AK9Q5TCS8 1911 aa20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 IARSP41252 1262 aaKnown RBP20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 ECHDC1Q9NTX5 307 aa20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 ZSCAN23Q3MJ62 389 aa20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 TTC12Q9H892 705 aaPredicted RBP20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 EXOC1Q9NV70 894 aa20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 RPRD2Q5VT52 1461 aaKnown RBP20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 THOC2Q8NI27 1593 aaKnown RBP20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 PRPF4BQ13523 1007 aaKnown RBP20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 SYCP3Q8IZU3 236 aa20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 V9GYY5 206 aaPredicted RBP20.01■□□□□ 0.79
NOTCH3-201ENST00000263388 PTCD1O75127 700 aaKnown RBP20■□□□□ 0.79
NOTCH3-201ENST00000263388 BMP15O95972 392 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 CCDC40Q4G0X9 1142 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 BICDL1Q6ZP65 573 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 RAPGEF6Q8TEU7 1601 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 KIF1BO60333 1816 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 IVLP07476 585 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 CCDC82Q8N4S0 544 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 BAG3O95817 575 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 MAATS1Q7Z4T9 603 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 DAAM2Q86T65 1068 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 KCNG4Q8TDN1 519 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 RPGRQ92834 1020 aaKnown RBP20■□□□□ 0.79
NOTCH3-201ENST00000263388 C20orf194Q5TEA3 1177 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 ANKS4BQ8N8V4 417 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 THUMPD2Q9BTF0 503 aaKnown RBP20■□□□□ 0.79
NOTCH3-201ENST00000263388 NCOA7Q8NI08 942 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 IL16Q14005 1332 aa20■□□□□ 0.79
NOTCH3-201ENST00000263388 FLIIQ13045 1269 aa19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 CCDC155Q8N6L0 562 aa19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 HOMER2Q9NSB8 354 aa19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 ADGBQ8N7X0 1667 aa19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 LRSAM1Q6UWE0 723 aa19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 SELENOOQ9BVL4 669 aa19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 UBASH3AP57075 661 aa19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 NUTM2BA6NNL0 878 aaPredicted RBP19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 NUTM2EB1AL46 878 aaPredicted RBP19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 SYKP43405 635 aa19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 NUTM2AQ8IVF1 878 aaPredicted RBP19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 CPLX3Q8WVH0 158 aa19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 WDHD1O75717 1129 aaPredicted RBP19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 LMAN1P49257 510 aa19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 BIN1O00499 593 aa19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 NEK1Q96PY6 1258 aa19.99■□□□□ 0.79
NOTCH3-201ENST00000263388 TTC22Q5TAA0 569 aa19.98■□□□□ 0.79
NOTCH3-201ENST00000263388 CCDC8Q9H0W5 538 aaPredicted RBP19.98■□□□□ 0.79
NOTCH3-201ENST00000263388 TCERG1LQ5VWI1 586 aa19.98■□□□□ 0.79
NOTCH3-201ENST00000263388 CTAGE9A4FU28 777 aa19.98■□□□□ 0.79
NOTCH3-201ENST00000263388 SPTY2D1Q68D10 685 aaPredicted RBP19.98■□□□□ 0.79
NOTCH3-201ENST00000263388 KRT222Q8N1A0 295 aa19.98■□□□□ 0.79
NOTCH3-201ENST00000263388 TSNARE1Q96NA8 513 aa19.98■□□□□ 0.79
NOTCH3-201ENST00000263388 TIGD1Q96MW7 591 aa19.98■□□□□ 0.79
NOTCH3-201ENST00000263388 KIAA0753Q2KHM9 967 aa19.98■□□□□ 0.79
NOTCH3-201ENST00000263388 CWC25Q9NXE8 425 aaPredicted RBP19.98■□□□□ 0.79
NOTCH3-201ENST00000263388 KDM5AP29375 1690 aaKnown RBP19.97■□□□□ 0.79
NOTCH3-201ENST00000263388 KIAA0586Q9BVV6 1533 aa19.97■□□□□ 0.79
NOTCH3-201ENST00000263388 ACTN2P35609 894 aa19.97■□□□□ 0.79
NOTCH3-201ENST00000263388 GNG11P61952 73 aa19.97■□□□□ 0.79
NOTCH3-201ENST00000263388 CDC5LQ99459 802 aaKnown RBP19.97■□□□□ 0.79
NOTCH3-201ENST00000263388 GTF2F1P35269 517 aaKnown RBP eCLIP19.97■□□□□ 0.79
NOTCH3-201ENST00000263388 NSRP1Q9H0G5 558 aaKnown RBP19.97■□□□□ 0.79
NOTCH3-201ENST00000263388 MICU3Q86XE3 530 aa19.97■□□□□ 0.79
NOTCH3-201ENST00000263388 KAT14Q9H8E8 782 aa19.97■□□□□ 0.79
NOTCH3-201ENST00000263388 MAP3K2Q9Y2U5 619 aa19.97■□□□□ 0.79
NOTCH3-201ENST00000263388 USP16Q9Y5T5 823 aa19.97■□□□□ 0.79
NOTCH3-201ENST00000263388 RASAL2Q9UJF2 1139 aa19.97■□□□□ 0.79
NOTCH3-201ENST00000263388 ADGRL1O94910 1474 aa19.96■□□□□ 0.79
NOTCH3-201ENST00000263388 PRPHP41219 470 aa19.96■□□□□ 0.79
NOTCH3-201ENST00000263388 STMN4Q9H169 189 aaPredicted RBP19.96■□□□□ 0.79
NOTCH3-201ENST00000263388 TRMT112Q9UI30 125 aaKnown RBP19.96■□□□□ 0.79
NOTCH3-201ENST00000263388 TUBB4AP04350 444 aa19.96■□□□□ 0.79
NOTCH3-201ENST00000263388 USP37Q86T82 979 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms