RNA–Protein interactions for RNA: ENST00000262428.4

COTL1-201, Transcript of coactosin like F-actin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COTL1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-201ENST00000262428 RTL5Q5HYW3 569 aaPredicted RBP20.54■□□□□ 0.88
COTL1-201ENST00000262428 SMIM5Q71RC9 77 aa20.54■□□□□ 0.88
COTL1-201ENST00000262428 TSHZ2Q9NRE2 1034 aa20.54■□□□□ 0.88
COTL1-201ENST00000262428 APBB1O00213 710 aa20.53■□□□□ 0.88
COTL1-201ENST00000262428 SURF6O75683 361 aaKnown RBP20.53■□□□□ 0.88
COTL1-201ENST00000262428 ZBTB38Q8NAP3 1195 aaPredicted RBP20.53■□□□□ 0.88
COTL1-201ENST00000262428 NOP58Q9Y2X3 529 aaKnown RBP20.53■□□□□ 0.88
COTL1-201ENST00000262428 RTCBQ9Y3I0 505 aaKnown RBP20.53■□□□□ 0.88
COTL1-201ENST00000262428 SMARCA5O60264 1052 aaPredicted RBP20.53■□□□□ 0.88
COTL1-201ENST00000262428 PROM2Q8N271 834 aa20.53■□□□□ 0.88
COTL1-201ENST00000262428 UBN2Q6ZU65 1347 aa20.52■□□□□ 0.88
COTL1-201ENST00000262428 PLSCR1O15162 318 aa20.52■□□□□ 0.88
COTL1-201ENST00000262428 AMIGO3Q86WK7 504 aa20.52■□□□□ 0.88
COTL1-201ENST00000262428 ZBTB47Q9UFB7 747 aaPredicted RBP20.52■□□□□ 0.88
COTL1-201ENST00000262428 RGL2O15211 777 aa20.51■□□□□ 0.87
COTL1-201ENST00000262428 RAB11FIP3O75154 756 aa20.51■□□□□ 0.87
COTL1-201ENST00000262428 TXNRD1Q16881 649 aa20.51■□□□□ 0.87
COTL1-201ENST00000262428 CLEC4GQ6UXB4 293 aa20.51■□□□□ 0.87
COTL1-201ENST00000262428 FAM89AQ96GI7 184 aa20.51■□□□□ 0.87
COTL1-201ENST00000262428 LRRCC1Q9C099 1032 aa20.51■□□□□ 0.87
COTL1-201ENST00000262428 APBA3O96018 575 aa20.5■□□□□ 0.87
COTL1-201ENST00000262428 LMBR1LQ6UX01 489 aa20.5■□□□□ 0.87
COTL1-201ENST00000262428 C16orf71Q8IYS4 520 aaPredicted RBP20.5■□□□□ 0.87
COTL1-201ENST00000262428 NARFQ9UHQ1 456 aa20.5■□□□□ 0.87
COTL1-201ENST00000262428 ZNF652Q9Y2D9 606 aa20.5■□□□□ 0.87
COTL1-201ENST00000262428 SCN7AQ01118 1682 aa20.5■□□□□ 0.87
COTL1-201ENST00000262428 HSP90AB4PQ58FF6 505 aa20.5■□□□□ 0.87
COTL1-201ENST00000262428 AK7Q96M32 723 aa20.5■□□□□ 0.87
COTL1-201ENST00000262428 PLA2G12BQ9BX93 195 aa20.5■□□□□ 0.87
COTL1-201ENST00000262428 PA2G4Q9UQ80 394 aaKnown RBP20.5■□□□□ 0.87
COTL1-201ENST00000262428 CDHR2Q9BYE9 1310 aa20.5■□□□□ 0.87
COTL1-201ENST00000262428 TNS1Q9HBL0 1735 aaKnown RBP20.5■□□□□ 0.87
COTL1-201ENST00000262428 RFX5P48382 616 aaPredicted RBP20.49■□□□□ 0.87
COTL1-201ENST00000262428 SUSD4Q5VX71 490 aa20.49■□□□□ 0.87
COTL1-201ENST00000262428 SYNE4Q8N205 404 aa20.49■□□□□ 0.87
COTL1-201ENST00000262428 ARHGEF1Q92888 912 aaKnown RBP20.49■□□□□ 0.87
COTL1-201ENST00000262428 TRMT112Q9UI30 125 aaKnown RBP20.49■□□□□ 0.87
COTL1-201ENST00000262428 UBR3Q6ZT12 1888 aa20.49■□□□□ 0.87
COTL1-201ENST00000262428 PARP10Q53GL7 1025 aa20.48■□□□□ 0.87
COTL1-201ENST00000262428 BCL2L12Q9HB09 334 aa20.48■□□□□ 0.87
COTL1-201ENST00000262428 PLEKHM2Q8IWE5 1019 aa20.48■□□□□ 0.87
COTL1-201ENST00000262428 NIP7Q9Y221 180 aaKnown RBP eCLIP20.48■□□□□ 0.87
COTL1-201ENST00000262428 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
COTL1-201ENST00000262428 TRAPPC3LQ5T215 181 aa20.47■□□□□ 0.87
COTL1-201ENST00000262428 USPL1Q5W0Q7 1092 aa20.47■□□□□ 0.87
COTL1-201ENST00000262428 RHPN1Q8TCX5 695 aa20.47■□□□□ 0.87
COTL1-201ENST00000262428 COPRSQ9NQ92 184 aa20.47■□□□□ 0.87
COTL1-201ENST00000262428 SRP68Q9UHB9 627 aaKnown RBP20.47■□□□□ 0.87
COTL1-201ENST00000262428 HMGB2P26583 209 aaKnown RBP20.46■□□□□ 0.87
COTL1-201ENST00000262428 OTUD7AQ8TE49 926 aaPredicted RBP20.46■□□□□ 0.87
COTL1-201ENST00000262428 KIF1BPQ96EK5 621 aa20.46■□□□□ 0.87
COTL1-201ENST00000262428 ZPR1O75312 459 aa20.46■□□□□ 0.87
COTL1-201ENST00000262428 PTPN12Q05209 780 aaKnown RBP20.46■□□□□ 0.87
COTL1-201ENST00000262428 KLHDC4Q8TBB5 520 aa20.46■□□□□ 0.87
COTL1-201ENST00000262428 UTP14AQ9BVJ6 771 aaKnown RBP20.46■□□□□ 0.87
COTL1-201ENST00000262428 BACH2Q9BYV9 841 aa20.46■□□□□ 0.87
COTL1-201ENST00000262428 BCL11AQ9H165 835 aa20.46■□□□□ 0.87
COTL1-201ENST00000262428 MYH3P11055 1940 aa20.45■□□□□ 0.86
COTL1-201ENST00000262428 IRS4O14654 1257 aaPredicted RBP20.45■□□□□ 0.86
COTL1-201ENST00000262428 CSF1RP07333 972 aa20.45■□□□□ 0.86
COTL1-201ENST00000262428 ADRA2BP18089 450 aa20.45■□□□□ 0.86
COTL1-201ENST00000262428 FAM161AQ3B820 660 aa20.45■□□□□ 0.86
COTL1-201ENST00000262428 PHF14O94880 888 aa20.44■□□□□ 0.86
COTL1-201ENST00000262428 RFC4P35249 363 aa20.44■□□□□ 0.86
COTL1-201ENST00000262428 OS9Q13438 667 aaPredicted RBP20.44■□□□□ 0.86
COTL1-201ENST00000262428 USP42Q9H9J4 1324 aaKnown RBP20.44■□□□□ 0.86
COTL1-201ENST00000262428 NTSR2O95665 410 aa20.43■□□□□ 0.86
COTL1-201ENST00000262428 G3BP1Q13283 466 aaKnown RBP eCLIP20.43■□□□□ 0.86
COTL1-201ENST00000262428 C8orf34Q49A92 452 aa20.43■□□□□ 0.86
COTL1-201ENST00000262428 TBC1D9BQ66K14 1250 aa20.43■□□□□ 0.86
COTL1-201ENST00000262428 ERC1Q8IUD2 1116 aa20.43■□□□□ 0.86
COTL1-201ENST00000262428 IL1RAPL2Q9NP60 686 aa20.43■□□□□ 0.86
COTL1-201ENST00000262428 CHMP3Q9Y3E7 222 aa20.43■□□□□ 0.86
COTL1-201ENST00000262428 RGPD3A6NKT7 1758 aaPredicted RBP20.43■□□□□ 0.86
COTL1-201ENST00000262428 RGPD4Q7Z3J3 1758 aa20.43■□□□□ 0.86
COTL1-201ENST00000262428 SH3TC1Q8TE82 1336 aa20.43■□□□□ 0.86
COTL1-201ENST00000262428 SALL3Q9BXA9 1300 aa20.43■□□□□ 0.86
COTL1-201ENST00000262428 FAM177BA6PVY3 158 aa20.43■□□□□ 0.86
COTL1-201ENST00000262428 SASH1O94885 1247 aa20.43■□□□□ 0.86
COTL1-201ENST00000262428 SIL1Q9H173 461 aa20.43■□□□□ 0.86
COTL1-201ENST00000262428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.42■□□□□ 0.86
COTL1-201ENST00000262428 PDE8AO60658 829 aa20.42■□□□□ 0.86
COTL1-201ENST00000262428 SSFA2P28290 1259 aa20.41■□□□□ 0.86
COTL1-201ENST00000262428 TTLL11Q8NHH1 800 aa20.41■□□□□ 0.86
COTL1-201ENST00000262428 DDX60Q8IY21 1712 aaKnown RBP20.41■□□□□ 0.86
COTL1-201ENST00000262428 CTSWP56202 376 aa20.41■□□□□ 0.86
COTL1-201ENST00000262428 OSBPL3Q9H4L5 887 aa20.41■□□□□ 0.86
COTL1-201ENST00000262428 BMP2KLQ5H9B9 411 aa20.4■□□□□ 0.86
COTL1-201ENST00000262428 BICDL1Q6ZP65 573 aa20.4■□□□□ 0.86
COTL1-201ENST00000262428 LAMB2P55268 1798 aa20.39■□□□□ 0.86
COTL1-201ENST00000262428 PDE1AP54750 535 aa20.39■□□□□ 0.86
COTL1-201ENST00000262428 COL24A1Q17RW2 1714 aa20.39■□□□□ 0.85
COTL1-201ENST00000262428 HCLS1P14317 486 aaPredicted RBP20.39■□□□□ 0.85
COTL1-201ENST00000262428 CCDC57Q2TAC2 916 aa20.39■□□□□ 0.85
COTL1-201ENST00000262428 AKT1S1Q96B36 256 aa20.39■□□□□ 0.85
COTL1-201ENST00000262428 SETDB2Q96T68 719 aa20.39■□□□□ 0.85
COTL1-201ENST00000262428 STAP2Q9UGK3 403 aa20.39■□□□□ 0.85
COTL1-201ENST00000262428 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.39■□□□□ 0.85
COTL1-201ENST00000262428 ZNF827Q17R98 1081 aa20.38■□□□□ 0.85
COTL1-201ENST00000262428 TTC22Q5TAA0 569 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms