RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 FANCIQ9NVI1 1328 aa15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 NPATQ14207 1427 aa15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 ATP2B3Q16720 1220 aa15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 SLAIN2Q9P270 581 aa15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 PI4KAP2A4QPH2 592 aa15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 RXRBP28702 533 aa15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 PI4KAP1Q8N8J0 262 aa15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 EIF5P55010 431 aaKnown RBP15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 CHPF2Q9P2E5 772 aa15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 ERMNQ8TAM6 284 aa15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 DDX11Q96FC9 970 aa15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 KRT23Q9C075 422 aa15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 ZFYVE16Q7Z3T8 1539 aa15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 TRAPPC8Q9Y2L5 1435 aa15.76■□□□□ 0.11
PDGFRB-201ENST00000261799 TEX35Q5T0J7 233 aa15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 COPS6Q7L5N1 327 aa15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 YTHDC2Q9H6S0 1430 aaKnown RBP15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 SMARCA5O60264 1052 aaPredicted RBP15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 CETN1Q12798 172 aa15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 LRRC27Q9C0I9 530 aa15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 SLC4A4Q9Y6R1 1079 aa15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 IRS4O14654 1257 aaPredicted RBP15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 ZNF710Q8N1W2 664 aa15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 SNRKQ9NRH2 765 aa15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 CCDC192P0DO97 292 aa15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 AMPD3Q01432 767 aa15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 EAPPQ56P03 285 aaPredicted RBP15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 FKBP15Q5T1M5 1219 aa15.75■□□□□ 0.11
PDGFRB-201ENST00000261799 PRPF40AO75400 957 aaKnown RBP15.74■□□□□ 0.11
PDGFRB-201ENST00000261799 HSP90B2PQ58FF3 399 aa15.74■□□□□ 0.11
PDGFRB-201ENST00000261799 DPY19L2Q6NUT2 758 aa15.74■□□□□ 0.11
PDGFRB-201ENST00000261799 LARGE2Q8N3Y3 721 aa15.74■□□□□ 0.11
PDGFRB-201ENST00000261799 C8orf76Q96K31 380 aa15.74■□□□□ 0.11
PDGFRB-201ENST00000261799 MAGEB6P1A0A0J9YX57 407 aa15.74■□□□□ 0.11
PDGFRB-201ENST00000261799 PLCD3Q8N3E9 789 aa15.74■□□□□ 0.11
PDGFRB-201ENST00000261799 SMARCC2Q8TAQ2 1214 aa15.74■□□□□ 0.11
PDGFRB-201ENST00000261799 MAST3O60307 1309 aa15.74■□□□□ 0.11
PDGFRB-201ENST00000261799 SMTNL1A8MU46 457 aa15.74■□□□□ 0.11
PDGFRB-201ENST00000261799 K7ELQ4 463 aaPredicted RBP15.74■□□□□ 0.11
PDGFRB-201ENST00000261799 ANAPC15P60006 121 aa15.74■□□□□ 0.11
PDGFRB-201ENST00000261799 NIM1KQ8IY84 436 aa15.74■□□□□ 0.11
PDGFRB-201ENST00000261799 ECM2O94769 699 aaPredicted RBP15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 ZFYP08048 801 aaPredicted RBP15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 KIF22Q14807 665 aa15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 PARP10Q53GL7 1025 aa15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 SYCP3Q8IZU3 236 aa15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 NFATC2IPQ8NCF5 419 aa15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 JARID2Q92833 1246 aaPredicted RBP15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 TRPC5Q9UL62 973 aaPredicted RBP15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 HSP90AA2PQ14568 343 aaPredicted RBP15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 BRDTQ58F21 947 aaPredicted RBP15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 NCOA7Q8NI08 942 aa15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 MBIPQ9NS73 344 aa15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 ECHDC1Q9NTX5 307 aa15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 LDHBP07195 334 aaKnown RBP15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 GBP2P32456 591 aaPredicted RBP15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 TCP11L1Q9NUJ3 509 aa15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 RPRD2Q5VT52 1461 aaKnown RBP15.73■□□□□ 0.11
PDGFRB-201ENST00000261799 MAP3K5Q99683 1374 aa15.72■□□□□ 0.11
PDGFRB-201ENST00000261799 IP6K1Q92551 441 aa15.72■□□□□ 0.11
PDGFRB-201ENST00000261799 UGGT2Q9NYU1 1516 aa15.72■□□□□ 0.11
PDGFRB-201ENST00000261799 ANKRD62A6NC57 917 aa15.72■□□□□ 0.11
PDGFRB-201ENST00000261799 ALDH1L1O75891 902 aa15.72■□□□□ 0.11
PDGFRB-201ENST00000261799 UFL1O94874 794 aa15.72■□□□□ 0.11
PDGFRB-201ENST00000261799 EPB41L2O43491 1005 aaKnown RBP15.72■□□□□ 0.11
PDGFRB-201ENST00000261799 VPS36Q86VN1 386 aa15.72■□□□□ 0.11
PDGFRB-201ENST00000261799 CCDC82Q8N4S0 544 aa15.72■□□□□ 0.11
PDGFRB-201ENST00000261799 TAF4BQ92750 862 aa15.72■□□□□ 0.11
PDGFRB-201ENST00000261799 CNNM2Q9H8M5 875 aa15.72■□□□□ 0.11
PDGFRB-201ENST00000261799 STX8Q9UNK0 236 aa15.72■□□□□ 0.11
PDGFRB-201ENST00000261799 IL15P40933 162 aaPredicted RBP15.72■□□□□ 0.11
PDGFRB-201ENST00000261799 TRMT1LQ7Z2T5 733 aaKnown RBP15.71■□□□□ 0.11
PDGFRB-201ENST00000261799 APBB1IPQ7Z5R6 666 aaPredicted RBP15.71■□□□□ 0.11
PDGFRB-201ENST00000261799 SSH1Q8WYL5 1049 aa15.71■□□□□ 0.11
PDGFRB-201ENST00000261799 GGA1Q9UJY5 639 aa15.71■□□□□ 0.11
PDGFRB-201ENST00000261799 PYM1Q9BRP8 204 aaKnown RBP15.71■□□□□ 0.11
PDGFRB-201ENST00000261799 TBCAO75347 108 aaKnown RBP15.71■□□□□ 0.11
PDGFRB-201ENST00000261799 ALDH1B1P30837 517 aa15.71■□□□□ 0.11
PDGFRB-201ENST00000261799 QTRT2Q9H974 415 aaKnown RBP15.71■□□□□ 0.11
PDGFRB-201ENST00000261799 NOD1Q9Y239 953 aa15.71■□□□□ 0.11
PDGFRB-201ENST00000261799 NUP153P49790 1475 aaKnown RBP15.71■□□□□ 0.1
PDGFRB-201ENST00000261799 EIF2AK4Q9P2K8 1649 aaKnown RBP15.71■□□□□ 0.1
PDGFRB-201ENST00000261799 GNAQP50148 359 aa15.71■□□□□ 0.1
PDGFRB-201ENST00000261799 SKIDA1Q1XH10 827 aa15.71■□□□□ 0.1
PDGFRB-201ENST00000261799 IFIT1BQ5T764 474 aaKnown RBP15.71■□□□□ 0.1
PDGFRB-201ENST00000261799 KSR2Q6VAB6 950 aa15.71■□□□□ 0.1
PDGFRB-201ENST00000261799 CCDC148Q8NFR7 591 aa15.71■□□□□ 0.1
PDGFRB-201ENST00000261799 IL16Q14005 1332 aa15.7■□□□□ 0.1
PDGFRB-201ENST00000261799 RFX1P22670 979 aa15.7■□□□□ 0.1
PDGFRB-201ENST00000261799 HMGN5P82970 282 aaKnown RBP15.7■□□□□ 0.1
PDGFRB-201ENST00000261799 DPP8Q6V1X1 898 aaPredicted RBP15.7■□□□□ 0.1
PDGFRB-201ENST00000261799 ESR2Q92731 530 aa15.7■□□□□ 0.1
PDGFRB-201ENST00000261799 IQSEC3Q9UPP2 1182 aaPredicted RBP15.7■□□□□ 0.1
PDGFRB-201ENST00000261799 RALGAPBQ86X10 1494 aa15.7■□□□□ 0.1
PDGFRB-201ENST00000261799 HOXC9P31274 260 aa15.7■□□□□ 0.1
PDGFRB-201ENST00000261799 SH2B1Q9NRF2 756 aaPredicted RBP15.7■□□□□ 0.1
PDGFRB-201ENST00000261799 NKTRP30414 1462 aaKnown RBP15.7■□□□□ 0.1
PDGFRB-201ENST00000261799 FAM83GA6ND36 823 aa15.7■□□□□ 0.1
PDGFRB-201ENST00000261799 GNAT2P19087 354 aa15.7■□□□□ 0.1
PDGFRB-201ENST00000261799 IVNS1ABPQ9Y6Y0 642 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms