RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 MSL1Q68DK7 614 aa19.94■□□□□ 0.78
CCDC90B-201ENST00000260054 EXOC6Q8TAG9 804 aa19.94■□□□□ 0.78
CCDC90B-201ENST00000260054 MEIS3Q99687 375 aa19.94■□□□□ 0.78
CCDC90B-201ENST00000260054 PSDA5PKW4 1024 aaPredicted RBP19.94■□□□□ 0.78
CCDC90B-201ENST00000260054 SOCS7O14512 581 aa19.94■□□□□ 0.78
CCDC90B-201ENST00000260054 PARP10Q53GL7 1025 aa19.94■□□□□ 0.78
CCDC90B-201ENST00000260054 NLGN1Q8N2Q7 840 aa19.94■□□□□ 0.78
CCDC90B-201ENST00000260054 GRM8O00222 908 aa19.93■□□□□ 0.78
CCDC90B-201ENST00000260054 TM4SF1P30408 202 aa19.93■□□□□ 0.78
CCDC90B-201ENST00000260054 SETDB2Q96T68 719 aa19.93■□□□□ 0.78
CCDC90B-201ENST00000260054 FAM177BA6PVY3 158 aa19.92■□□□□ 0.78
CCDC90B-201ENST00000260054 NEFLP07196 543 aa19.92■□□□□ 0.78
CCDC90B-201ENST00000260054 NBPF7P0C2Y1 421 aaPredicted RBP19.92■□□□□ 0.78
CCDC90B-201ENST00000260054 JARID2Q92833 1246 aaPredicted RBP19.92■□□□□ 0.78
CCDC90B-201ENST00000260054 C9orf78Q9NZ63 289 aaPredicted RBP19.92■□□□□ 0.78
CCDC90B-201ENST00000260054 CASZ1Q86V15 1759 aa19.92■□□□□ 0.78
CCDC90B-201ENST00000260054 COL24A1Q17RW2 1714 aa19.92■□□□□ 0.78
CCDC90B-201ENST00000260054 SLC16A10Q8TF71 515 aa19.91■□□□□ 0.78
CCDC90B-201ENST00000260054 UTYO14607 1347 aa19.91■□□□□ 0.78
CCDC90B-201ENST00000260054 H7C1W4 665 aa19.91■□□□□ 0.78
CCDC90B-201ENST00000260054 NTSR2O95665 410 aa19.91■□□□□ 0.78
CCDC90B-201ENST00000260054 DDR1Q08345 913 aa19.91■□□□□ 0.78
CCDC90B-201ENST00000260054 RTL5Q5HYW3 569 aaPredicted RBP19.91■□□□□ 0.78
CCDC90B-201ENST00000260054 CARMIL3Q8ND23 1372 aa19.9■□□□□ 0.78
CCDC90B-201ENST00000260054 CASP7P55210 303 aa19.9■□□□□ 0.78
CCDC90B-201ENST00000260054 UBE3BQ7Z3V4 1068 aa19.9■□□□□ 0.78
CCDC90B-201ENST00000260054 PPP1R42Q7Z4L9 355 aa19.9■□□□□ 0.78
CCDC90B-201ENST00000260054 SYNE4Q8N205 404 aa19.9■□□□□ 0.78
CCDC90B-201ENST00000260054 ZBTB38Q8NAP3 1195 aaPredicted RBP19.9■□□□□ 0.78
CCDC90B-201ENST00000260054 FAM89AQ96GI7 184 aa19.9■□□□□ 0.78
CCDC90B-201ENST00000260054 UTP14AQ9BVJ6 771 aaKnown RBP19.9■□□□□ 0.78
CCDC90B-201ENST00000260054 ZBTB40Q9NUA8 1239 aa19.9■□□□□ 0.78
CCDC90B-201ENST00000260054 TRMT112Q9UI30 125 aaKnown RBP19.9■□□□□ 0.78
CCDC90B-201ENST00000260054 POLRMTO00411 1230 aaKnown RBP19.89■□□□□ 0.77
CCDC90B-201ENST00000260054 PCCAP05165 728 aaPredicted RBP19.89■□□□□ 0.77
CCDC90B-201ENST00000260054 MMP10P09238 476 aa19.89■□□□□ 0.77
CCDC90B-201ENST00000260054 GNAI3P08754 354 aa19.88■□□□□ 0.77
CCDC90B-201ENST00000260054 UBTFL1P0CB47 393 aaPredicted RBP19.88■□□□□ 0.77
CCDC90B-201ENST00000260054 NBPF5PQ86XG9 351 aaPredicted RBP19.88■□□□□ 0.77
CCDC90B-201ENST00000260054 ZBTB7AO95365 584 aa19.87■□□□□ 0.77
CCDC90B-201ENST00000260054 NUTM1Q86Y26 1132 aa19.87■□□□□ 0.77
CCDC90B-201ENST00000260054 SERPINB2P05120 415 aa19.87■□□□□ 0.77
CCDC90B-201ENST00000260054 SUCLG2Q96I99 432 aa19.87■□□□□ 0.77
CCDC90B-201ENST00000260054 CHMP4BQ9H444 224 aaKnown RBP19.87■□□□□ 0.77
CCDC90B-201ENST00000260054 C1orf115Q9H7X2 142 aa19.87■□□□□ 0.77
CCDC90B-201ENST00000260054 SH3TC1Q8TE82 1336 aa19.86■□□□□ 0.77
CCDC90B-201ENST00000260054 NYXQ9GZU5 481 aa19.86■□□□□ 0.77
CCDC90B-201ENST00000260054 ERFEQ4G0M1 354 aa19.85■□□□□ 0.77
CCDC90B-201ENST00000260054 TPTE2Q6XPS3 522 aa19.85■□□□□ 0.77
CCDC90B-201ENST00000260054 KAZALD1Q96I82 304 aa19.85■□□□□ 0.77
CCDC90B-201ENST00000260054 MTFR1LQ9H019 292 aa19.85■□□□□ 0.77
CCDC90B-201ENST00000260054 LRRFIP2Q9Y608 721 aaKnown RBP19.85■□□□□ 0.77
CCDC90B-201ENST00000260054 CDHR2Q9BYE9 1310 aa19.85■□□□□ 0.77
CCDC90B-201ENST00000260054 GNAI2P04899 355 aa19.84■□□□□ 0.77
CCDC90B-201ENST00000260054 PRR5LQ6MZQ0 368 aa19.84■□□□□ 0.77
CCDC90B-201ENST00000260054 CCDC24Q8N4L8 307 aa19.84■□□□□ 0.77
CCDC90B-201ENST00000260054 ABCC12Q96J65 1359 aa19.84■□□□□ 0.77
CCDC90B-201ENST00000260054 IRS4O14654 1257 aaPredicted RBP19.84■□□□□ 0.77
CCDC90B-201ENST00000260054 EPHA10Q5JZY3 1008 aa19.84■□□□□ 0.77
CCDC90B-201ENST00000260054 CNBD1Q8NA66 436 aa19.84■□□□□ 0.77
CCDC90B-201ENST00000260054 ATF5Q9Y2D1 282 aaPredicted RBP19.84■□□□□ 0.77
CCDC90B-201ENST00000260054 PARP3Q9Y6F1 533 aa19.84■□□□□ 0.77
CCDC90B-201ENST00000260054 GTF2E1P29083 439 aaPredicted RBP19.83■□□□□ 0.76
CCDC90B-201ENST00000260054 NRXN2Q9P2S2 1712 aa19.83■□□□□ 0.76
CCDC90B-201ENST00000260054 NPHP1O15259 732 aa19.82■□□□□ 0.76
CCDC90B-201ENST00000260054 HCLS1P14317 486 aaPredicted RBP19.82■□□□□ 0.76
CCDC90B-201ENST00000260054 AAMPQ13685 434 aa19.81■□□□□ 0.76
CCDC90B-201ENST00000260054 PLA2G12BQ9BX93 195 aa19.81■□□□□ 0.76
CCDC90B-201ENST00000260054 BICC1Q9H694 974 aaKnown RBP19.81■□□□□ 0.76
CCDC90B-201ENST00000260054 FOXO4P98177 505 aa19.81■□□□□ 0.76
CCDC90B-201ENST00000260054 SLC10A5Q5PT55 438 aa19.81■□□□□ 0.76
CCDC90B-201ENST00000260054 ANKRD44Q8N8A2 993 aa19.81■□□□□ 0.76
CCDC90B-201ENST00000260054 HDAC5Q9UQL6 1122 aa19.81■□□□□ 0.76
CCDC90B-201ENST00000260054 PCDHB15Q9Y5E8 787 aa19.81■□□□□ 0.76
CCDC90B-201ENST00000260054 DDX60Q8IY21 1712 aaKnown RBP19.8■□□□□ 0.76
CCDC90B-201ENST00000260054 PDE8AO60658 829 aa19.79■□□□□ 0.76
CCDC90B-201ENST00000260054 CEP85Q6P2H3 762 aa19.79■□□□□ 0.76
CCDC90B-201ENST00000260054 C3orf67Q6ZVT6 689 aa19.79■□□□□ 0.76
CCDC90B-201ENST00000260054 SGIP1Q9BQI5 828 aa19.79■□□□□ 0.76
CCDC90B-201ENST00000260054 LAMB2P55268 1798 aa19.79■□□□□ 0.76
CCDC90B-201ENST00000260054 ST5P78524 1137 aa19.78■□□□□ 0.76
CCDC90B-201ENST00000260054 RABL6Q3YEC7 729 aaPredicted RBP19.78■□□□□ 0.76
CCDC90B-201ENST00000260054 CTSWP56202 376 aa19.78■□□□□ 0.76
CCDC90B-201ENST00000260054 ERICH6BQ5W0A0 696 aa19.78■□□□□ 0.76
CCDC90B-201ENST00000260054 LMBR1LQ6UX01 489 aa19.78■□□□□ 0.76
CCDC90B-201ENST00000260054 RIC1Q4ADV7 1423 aa19.77■□□□□ 0.76
CCDC90B-201ENST00000260054 TNRC6CQ9HCJ0 1690 aaKnown RBP19.77■□□□□ 0.76
CCDC90B-201ENST00000260054 HSP90B1P14625 803 aaKnown RBP19.77■□□□□ 0.76
CCDC90B-201ENST00000260054 POLD1P28340 1107 aa19.77■□□□□ 0.76
CCDC90B-201ENST00000260054 SIRT2Q8IXJ6 389 aa19.77■□□□□ 0.76
CCDC90B-201ENST00000260054 TTLL11Q8NHH1 800 aa19.77■□□□□ 0.76
CCDC90B-201ENST00000260054 PNMA6EA0A0J9YXQ4 647 aa19.76■□□□□ 0.75
CCDC90B-201ENST00000260054 CSF1RP07333 972 aa19.76■□□□□ 0.75
CCDC90B-201ENST00000260054 PTGER2P43116 358 aa19.76■□□□□ 0.75
CCDC90B-201ENST00000260054 MTX1Q13505 466 aa19.76■□□□□ 0.75
CCDC90B-201ENST00000260054 CCDC85AQ96PX6 553 aaPredicted RBP19.76■□□□□ 0.75
CCDC90B-201ENST00000260054 ATP8B2P98198 1209 aa19.75■□□□□ 0.75
CCDC90B-201ENST00000260054 RPAP2Q8IXW5 612 aaPredicted RBP19.75■□□□□ 0.75
CCDC90B-201ENST00000260054 MYH3P11055 1940 aa19.75■□□□□ 0.75
CCDC90B-201ENST00000260054 NLRP3Q96P20 1036 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms