RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TMEM266Q2M3C6 531 aa15.78■□□□□ 0.12
PRPF38A-201ENST00000257181 IRS4O14654 1257 aaPredicted RBP15.78■□□□□ 0.12
PRPF38A-201ENST00000257181 SYCP1Q15431 976 aa15.78■□□□□ 0.12
PRPF38A-201ENST00000257181 WDR17Q8IZU2 1322 aa15.78■□□□□ 0.12
PRPF38A-201ENST00000257181 PDE8AO60658 829 aa15.78■□□□□ 0.12
PRPF38A-201ENST00000257181 SLC27A3Q5K4L6 730 aa15.78■□□□□ 0.12
PRPF38A-201ENST00000257181 ZNF219Q9P2Y4 722 aaPredicted RBP15.78■□□□□ 0.12
PRPF38A-201ENST00000257181 ATP2B3Q16720 1220 aa15.77■□□□□ 0.12
PRPF38A-201ENST00000257181 HMG20BQ9P0W2 317 aa15.77■□□□□ 0.12
PRPF38A-201ENST00000257181 STXBP4Q6ZWJ1 553 aa15.77■□□□□ 0.12
PRPF38A-201ENST00000257181 CHD1LQ86WJ1 897 aa15.77■□□□□ 0.12
PRPF38A-201ENST00000257181 CREBRFQ8IUR6 639 aa15.77■□□□□ 0.12
PRPF38A-201ENST00000257181 LUC7LQ9NQ29 371 aaKnown RBP15.77■□□□□ 0.12
PRPF38A-201ENST00000257181 MX1P20591 662 aa15.77■□□□□ 0.11
PRPF38A-201ENST00000257181 ZNF710Q8N1W2 664 aa15.77■□□□□ 0.11
PRPF38A-201ENST00000257181 GRM8O00222 908 aa15.76■□□□□ 0.11
PRPF38A-201ENST00000257181 PPP1R12BO60237 982 aaPredicted RBP15.76■□□□□ 0.11
PRPF38A-201ENST00000257181 CT47A1Q5JQC4 288 aaPredicted RBP15.76■□□□□ 0.11
PRPF38A-201ENST00000257181 WDR66Q8TBY9 1149 aa15.76■□□□□ 0.11
PRPF38A-201ENST00000257181 TMOD4Q9NZQ9 345 aa15.76■□□□□ 0.11
PRPF38A-201ENST00000257181 NFATC2IPQ8NCF5 419 aa15.76■□□□□ 0.11
PRPF38A-201ENST00000257181 SMC2O95347 1197 aa15.76■□□□□ 0.11
PRPF38A-201ENST00000257181 COPS6Q7L5N1 327 aa15.76■□□□□ 0.11
PRPF38A-201ENST00000257181 KDM5AP29375 1690 aaKnown RBP15.76■□□□□ 0.11
PRPF38A-201ENST00000257181 ZNF213O14771 459 aa15.76■□□□□ 0.11
PRPF38A-201ENST00000257181 DPP8Q6V1X1 898 aaPredicted RBP15.76■□□□□ 0.11
PRPF38A-201ENST00000257181 PICK1Q9NRD5 415 aa15.76■□□□□ 0.11
PRPF38A-201ENST00000257181 ZNF335Q9H4Z2 1342 aaPredicted RBP15.76■□□□□ 0.11
PRPF38A-201ENST00000257181 ADRA2BP18089 450 aa15.75■□□□□ 0.11
PRPF38A-201ENST00000257181 ECHDC1Q9NTX5 307 aa15.75■□□□□ 0.11
PRPF38A-201ENST00000257181 LARGE2Q8N3Y3 721 aa15.75■□□□□ 0.11
PRPF38A-201ENST00000257181 CALM1P0DP23 149 aa15.75■□□□□ 0.11
PRPF38A-201ENST00000257181 CALM2P0DP24 149 aa15.75■□□□□ 0.11
PRPF38A-201ENST00000257181 CALM3P0DP25 149 aa15.75■□□□□ 0.11
PRPF38A-201ENST00000257181 ZNF790Q6PG37 636 aa15.75■□□□□ 0.11
PRPF38A-201ENST00000257181 SASS6Q6UVJ0 657 aa15.75■□□□□ 0.11
PRPF38A-201ENST00000257181 UBE3BQ7Z3V4 1068 aa15.75■□□□□ 0.11
PRPF38A-201ENST00000257181 NUP133Q8WUM0 1156 aa15.75■□□□□ 0.11
PRPF38A-201ENST00000257181 MBIPQ9NS73 344 aa15.75■□□□□ 0.11
PRPF38A-201ENST00000257181 FILIP1LQ4L180 1135 aa15.74■□□□□ 0.11
PRPF38A-201ENST00000257181 VPS37CA5D8V6 355 aaPredicted RBP15.74■□□□□ 0.11
PRPF38A-201ENST00000257181 KAT14Q9H8E8 782 aa15.74■□□□□ 0.11
PRPF38A-201ENST00000257181 MTMR7Q9Y216 660 aa15.74■□□□□ 0.11
PRPF38A-201ENST00000257181 KIF4AO95239 1232 aa15.74■□□□□ 0.11
PRPF38A-201ENST00000257181 POTEJP0CG39 1038 aa15.74■□□□□ 0.11
PRPF38A-201ENST00000257181 GLT8D2Q9H1C3 349 aa15.74■□□□□ 0.11
PRPF38A-201ENST00000257181 PTPRMP28827 1452 aa15.74■□□□□ 0.11
PRPF38A-201ENST00000257181 MTHFSDQ2M296 383 aaKnown RBP15.74■□□□□ 0.11
PRPF38A-201ENST00000257181 TNS3Q68CZ2 1445 aa15.74■□□□□ 0.11
PRPF38A-201ENST00000257181 AS3MTQ9HBK9 375 aa15.74■□□□□ 0.11
PRPF38A-201ENST00000257181 NAA16Q6N069 864 aaPredicted RBP15.74■□□□□ 0.11
PRPF38A-201ENST00000257181 IQGAP3Q86VI3 1631 aa15.74■□□□□ 0.11
PRPF38A-201ENST00000257181 DIP2AQ14689 1571 aa15.73■□□□□ 0.11
PRPF38A-201ENST00000257181 DCAF15Q66K64 600 aa15.73■□□□□ 0.11
PRPF38A-201ENST00000257181 CCDC39Q9UFE4 941 aa15.73■□□□□ 0.11
PRPF38A-201ENST00000257181 PI4KAP2A4QPH2 592 aa15.73■□□□□ 0.11
PRPF38A-201ENST00000257181 ATP2B4P23634 1241 aa15.73■□□□□ 0.11
PRPF38A-201ENST00000257181 WDR78Q5VTH9 848 aa15.73■□□□□ 0.11
PRPF38A-201ENST00000257181 PI4KAP1Q8N8J0 262 aa15.73■□□□□ 0.11
PRPF38A-201ENST00000257181 SPATA31A3Q5VYP0 1347 aa15.73■□□□□ 0.11
PRPF38A-201ENST00000257181 LDHBP07195 334 aaKnown RBP15.73■□□□□ 0.11
PRPF38A-201ENST00000257181 PRIM1P49642 420 aaKnown RBP15.73■□□□□ 0.11
PRPF38A-201ENST00000257181 GOLGA6L1Q8N7Z2 621 aa15.73■□□□□ 0.11
PRPF38A-201ENST00000257181 SCLT1Q96NL6 688 aa15.73■□□□□ 0.11
PRPF38A-201ENST00000257181 LAMC1P11047 1609 aa15.73■□□□□ 0.11
PRPF38A-201ENST00000257181 GLIPR1L2Q4G1C9 344 aa15.72■□□□□ 0.11
PRPF38A-201ENST00000257181 CCDC148Q8NFR7 591 aa15.72■□□□□ 0.11
PRPF38A-201ENST00000257181 GTPBP4Q9BZE4 634 aaKnown RBP15.72■□□□□ 0.11
PRPF38A-201ENST00000257181 ERCC6L2Q5T890 1561 aa15.72■□□□□ 0.11
PRPF38A-201ENST00000257181 TMED8Q6PL24 325 aaPredicted RBP15.72■□□□□ 0.11
PRPF38A-201ENST00000257181 MROH5Q6ZUA9 1318 aa15.72■□□□□ 0.11
PRPF38A-201ENST00000257181 OFD1O75665 1012 aa15.72■□□□□ 0.11
PRPF38A-201ENST00000257181 HMGN5P82970 282 aaKnown RBP15.72■□□□□ 0.11
PRPF38A-201ENST00000257181 CCDC150Q8NCX0 1101 aa15.72■□□□□ 0.11
PRPF38A-201ENST00000257181 AFF2P51816 1311 aa15.71■□□□□ 0.11
PRPF38A-201ENST00000257181 STK38Q15208 465 aa15.71■□□□□ 0.11
PRPF38A-201ENST00000257181 SH2B1Q9NRF2 756 aaPredicted RBP15.71■□□□□ 0.11
PRPF38A-201ENST00000257181 MYO6Q9UM54 1294 aa15.71■□□□□ 0.11
PRPF38A-201ENST00000257181 PTCH1Q13635 1447 aa15.71■□□□□ 0.11
PRPF38A-201ENST00000257181 BMP15O95972 392 aa15.71■□□□□ 0.11
PRPF38A-201ENST00000257181 MIS18AQ9NYP9 233 aa15.71■□□□□ 0.11
PRPF38A-201ENST00000257181 ZMYM4Q5VZL5 1548 aa15.71■□□□□ 0.11
PRPF38A-201ENST00000257181 CHPF2Q9P2E5 772 aa15.71■□□□□ 0.1
PRPF38A-201ENST00000257181 STK24Q9Y6E0 443 aa15.71■□□□□ 0.1
PRPF38A-201ENST00000257181 CPS1P31327 1500 aa15.71■□□□□ 0.1
PRPF38A-201ENST00000257181 RNF123Q5XPI4 1314 aa15.7■□□□□ 0.1
PRPF38A-201ENST00000257181 RARSP54136 660 aaKnown RBP15.7■□□□□ 0.1
PRPF38A-201ENST00000257181 SEPT12Q8IYM1 358 aa15.7■□□□□ 0.1
PRPF38A-201ENST00000257181 CFAP45Q9UL16 551 aa15.7■□□□□ 0.1
PRPF38A-201ENST00000257181 DIP2BQ9P265 1576 aa15.7■□□□□ 0.1
PRPF38A-201ENST00000257181 AMER1Q5JTC6 1135 aaPredicted RBP15.7■□□□□ 0.1
PRPF38A-201ENST00000257181 FBXO3Q9UK99 471 aa15.7■□□□□ 0.1
PRPF38A-201ENST00000257181 NSFL1CQ9UNZ2 370 aaKnown RBP15.7■□□□□ 0.1
PRPF38A-201ENST00000257181 SLC12A7Q9Y666 1083 aa15.7■□□□□ 0.1
PRPF38A-201ENST00000257181 MINDY4BA8MYZ0 360 aa15.7■□□□□ 0.1
PRPF38A-201ENST00000257181 FGFR1OPO95684 399 aaKnown RBP15.7■□□□□ 0.1
PRPF38A-201ENST00000257181 CCDC173Q0VFZ6 552 aa15.7■□□□□ 0.1
PRPF38A-201ENST00000257181 MPNDQ8N594 471 aa15.7■□□□□ 0.1
PRPF38A-201ENST00000257181 MFSD6Q6ZSS7 791 aa15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 ESR2Q92731 530 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms