RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 RGPD3A6NKT7 1758 aaPredicted RBP14.17□□□□□ -0.14
CCNA1-201ENST00000255465 RGPD4Q7Z3J3 1758 aa14.17□□□□□ -0.14
CCNA1-201ENST00000255465 U2AF1L5P0DN76 240 aaPredicted RBP14.16□□□□□ -0.14
CCNA1-201ENST00000255465 U2AF1Q01081 240 aaKnown RBP eCLIP14.16□□□□□ -0.14
CCNA1-201ENST00000255465 EN1Q05925 392 aaPredicted RBP14.16□□□□□ -0.14
CCNA1-201ENST00000255465 TRDNQ13061 729 aa14.16□□□□□ -0.14
CCNA1-201ENST00000255465 NKX1-1Q15270 411 aaPredicted RBP14.16□□□□□ -0.14
CCNA1-201ENST00000255465 NBPF9Q3BBW0 867 aa14.16□□□□□ -0.14
CCNA1-201ENST00000255465 CCDC91Q7Z6B0 441 aa14.16□□□□□ -0.14
CCNA1-201ENST00000255465 RIOK3O14730 519 aaKnown RBP14.16□□□□□ -0.14
CCNA1-201ENST00000255465 NUCB2P80303 420 aa14.16□□□□□ -0.14
CCNA1-201ENST00000255465 SLFNL1Q499Z3 407 aa14.16□□□□□ -0.14
CCNA1-201ENST00000255465 ZNF530Q6P9A1 599 aaPredicted RBP14.16□□□□□ -0.14
CCNA1-201ENST00000255465 TTC36A6NLP5 189 aa14.15□□□□□ -0.14
CCNA1-201ENST00000255465 KIF3CO14782 793 aa14.15□□□□□ -0.14
CCNA1-201ENST00000255465 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
CCNA1-201ENST00000255465 HNRNPH2P55795 449 aaKnown RBP14.15□□□□□ -0.14
CCNA1-201ENST00000255465 NCBP1Q09161 790 aaKnown RBP14.15□□□□□ -0.14
CCNA1-201ENST00000255465 DUSP27Q5VZP5 1158 aa14.15□□□□□ -0.14
CCNA1-201ENST00000255465 SPRYD3Q8NCJ5 442 aa14.15□□□□□ -0.14
CCNA1-201ENST00000255465 CWC15Q9P013 229 aaKnown RBP14.15□□□□□ -0.14
CCNA1-201ENST00000255465 SCN11AQ9UI33 1791 aa14.15□□□□□ -0.14
CCNA1-201ENST00000255465 IGHDP01880 384 aa14.14□□□□□ -0.15
CCNA1-201ENST00000255465 TMED8Q6PL24 325 aaPredicted RBP14.14□□□□□ -0.15
CCNA1-201ENST00000255465 ZNF397Q8NF99 534 aaPredicted RBP14.14□□□□□ -0.15
CCNA1-201ENST00000255465 TSC1Q92574 1164 aa14.14□□□□□ -0.15
CCNA1-201ENST00000255465 CLUAP1Q96AJ1 413 aa14.14□□□□□ -0.15
CCNA1-201ENST00000255465 SYTL4Q96C24 671 aaPredicted RBP14.14□□□□□ -0.15
CCNA1-201ENST00000255465 CHMP4CQ96CF2 233 aa14.14□□□□□ -0.15
CCNA1-201ENST00000255465 RREB1Q92766 1687 aa14.14□□□□□ -0.15
CCNA1-201ENST00000255465 FCHSD2O94868 740 aa14.14□□□□□ -0.15
CCNA1-201ENST00000255465 PRKAR2BP31323 418 aa14.14□□□□□ -0.15
CCNA1-201ENST00000255465 SSR1P43307 286 aaKnown RBP14.14□□□□□ -0.15
CCNA1-201ENST00000255465 EZH2Q15910 746 aaKnown RBP14.14□□□□□ -0.15
CCNA1-201ENST00000255465 NOM1Q5C9Z4 860 aaKnown RBP14.14□□□□□ -0.15
CCNA1-201ENST00000255465 SWT1Q5T5J6 900 aaKnown RBP14.14□□□□□ -0.15
CCNA1-201ENST00000255465 CAMKK2Q96RR4 588 aa14.14□□□□□ -0.15
CCNA1-201ENST00000255465 PLSCR1O15162 318 aa14.13□□□□□ -0.15
CCNA1-201ENST00000255465 MTHFSDQ2M296 383 aaKnown RBP14.13□□□□□ -0.15
CCNA1-201ENST00000255465 C1orf141Q5JVX7 400 aa14.13□□□□□ -0.15
CCNA1-201ENST00000255465 RNF20Q5VTR2 975 aa14.13□□□□□ -0.15
CCNA1-201ENST00000255465 SMTNL1A8MU46 457 aa14.12□□□□□ -0.15
CCNA1-201ENST00000255465 GOLIM4O00461 696 aa14.12□□□□□ -0.15
CCNA1-201ENST00000255465 MBD3O95983 291 aa14.12□□□□□ -0.15
CCNA1-201ENST00000255465 PRR29P0C7W0 189 aa14.12□□□□□ -0.15
CCNA1-201ENST00000255465 GSCP56915 257 aaPredicted RBP14.12□□□□□ -0.15
CCNA1-201ENST00000255465 NBPF10Q6P3W6 841 aaKnown RBP14.12□□□□□ -0.15
CCNA1-201ENST00000255465 DLG5Q8TDM6 1919 aa14.12□□□□□ -0.15
CCNA1-201ENST00000255465 A0A1B0GUL7 405 aa14.12□□□□□ -0.15
CCNA1-201ENST00000255465 TEX35Q5T0J7 233 aa14.12□□□□□ -0.15
CCNA1-201ENST00000255465 KIF1BPQ96EK5 621 aa14.12□□□□□ -0.15
CCNA1-201ENST00000255465 PHACTR3Q96KR7 559 aa14.12□□□□□ -0.15
CCNA1-201ENST00000255465 LMBRD1Q9NUN5 540 aa14.12□□□□□ -0.15
CCNA1-201ENST00000255465 ZNF521Q96K83 1311 aa14.11□□□□□ -0.15
CCNA1-201ENST00000255465 LY75O60449 1722 aa14.11□□□□□ -0.15
CCNA1-201ENST00000255465 NUP188Q5SRE5 1749 aa14.11□□□□□ -0.15
CCNA1-201ENST00000255465 ZNF853P0CG23 659 aa14.11□□□□□ -0.15
CCNA1-201ENST00000255465 RABEP1Q15276 862 aa14.11□□□□□ -0.15
CCNA1-201ENST00000255465 ZKSCAN8Q15776 578 aaPredicted RBP14.11□□□□□ -0.15
CCNA1-201ENST00000255465 AKAP4Q5JQC9 854 aa14.11□□□□□ -0.15
CCNA1-201ENST00000255465 CAVIN1Q6NZI2 390 aaKnown RBP14.11□□□□□ -0.15
CCNA1-201ENST00000255465 FAM43BQ6ZT52 329 aaPredicted RBP14.11□□□□□ -0.15
CCNA1-201ENST00000255465 DCAF5Q96JK2 942 aa14.11□□□□□ -0.15
CCNA1-201ENST00000255465 PAXBP1Q9Y5B6 917 aa14.11□□□□□ -0.15
CCNA1-201ENST00000255465 KDM6AO15550 1401 aaPredicted RBP14.11□□□□□ -0.15
CCNA1-201ENST00000255465 MPRIPQ6WCQ1 1025 aa14.1□□□□□ -0.15
CCNA1-201ENST00000255465 SUGP1Q8IWZ8 645 aaKnown RBP14.1□□□□□ -0.15
CCNA1-201ENST00000255465 TRMT2AQ8IZ69 625 aaKnown RBP14.1□□□□□ -0.15
CCNA1-201ENST00000255465 NOL10Q9BSC4 688 aaKnown RBP14.1□□□□□ -0.15
CCNA1-201ENST00000255465 TACO1Q9BSH4 297 aaKnown RBP14.1□□□□□ -0.15
CCNA1-201ENST00000255465 DEF6Q9H4E7 631 aa14.1□□□□□ -0.15
CCNA1-201ENST00000255465 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.1□□□□□ -0.15
CCNA1-201ENST00000255465 TDO2P48775 406 aa14.1□□□□□ -0.15
CCNA1-201ENST00000255465 GAS2L2Q8NHY3 880 aa14.1□□□□□ -0.15
CCNA1-201ENST00000255465 JRKLQ9Y4A0 524 aa14.1□□□□□ -0.15
CCNA1-201ENST00000255465 ADAMTS7Q9UKP4 1686 aa14.09□□□□□ -0.15
CCNA1-201ENST00000255465 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.09□□□□□ -0.15
CCNA1-201ENST00000255465 ATP2B1P20020 1258 aa14.09□□□□□ -0.15
CCNA1-201ENST00000255465 GOLGA2Q08379 1002 aa14.09□□□□□ -0.15
CCNA1-201ENST00000255465 JARID2Q92833 1246 aaPredicted RBP14.09□□□□□ -0.15
CCNA1-201ENST00000255465 SYAP1Q96A49 352 aaPredicted RBP14.09□□□□□ -0.15
CCNA1-201ENST00000255465 CFAP44Q96MT7 982 aa14.09□□□□□ -0.15
CCNA1-201ENST00000255465 ERVV-2B6SEH9 535 aa14.08□□□□□ -0.16
CCNA1-201ENST00000255465 K7ELQ4 463 aaPredicted RBP14.08□□□□□ -0.16
CCNA1-201ENST00000255465 PROM2Q8N271 834 aa14.08□□□□□ -0.16
CCNA1-201ENST00000255465 KIAA1524Q8TCG1 905 aa14.08□□□□□ -0.16
CCNA1-201ENST00000255465 PIGBQ92521 554 aa14.08□□□□□ -0.16
CCNA1-201ENST00000255465 ZBTB9Q96C00 473 aa14.08□□□□□ -0.16
CCNA1-201ENST00000255465 PPP1R12AO14974 1030 aaPredicted RBP14.08□□□□□ -0.16
CCNA1-201ENST00000255465 PLEKHF1Q96S99 279 aa14.08□□□□□ -0.16
CCNA1-201ENST00000255465 TSPY26PQ9H489 355 aa14.08□□□□□ -0.16
CCNA1-201ENST00000255465 CXorf56Q9H5V9 222 aa14.08□□□□□ -0.16
CCNA1-201ENST00000255465 TMOD3Q9NYL9 352 aa14.08□□□□□ -0.16
CCNA1-201ENST00000255465 SH3BP1Q9Y3L3 701 aa14.08□□□□□ -0.16
CCNA1-201ENST00000255465 V9GYY5 206 aaPredicted RBP14.08□□□□□ -0.16
CCNA1-201ENST00000255465 ERICH4A6NGS2 130 aa14.07□□□□□ -0.16
CCNA1-201ENST00000255465 BMS1Q14692 1282 aaKnown RBP14.07□□□□□ -0.16
CCNA1-201ENST00000255465 WDR43Q15061 677 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCNA1-201ENST00000255465 TXNRD1Q16881 649 aa14.07□□□□□ -0.16
CCNA1-201ENST00000255465 RWDD1Q9H446 243 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms