RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 ZNF589Q86UQ0 364 aaPredicted RBP11.17□□□□□ -0.62
RPA1-201ENST00000254719 NDUFB9Q9Y6M9 179 aa11.17□□□□□ -0.62
RPA1-201ENST00000254719 GOLGA6L3A6NEY3 463 aa11.17□□□□□ -0.62
RPA1-201ENST00000254719 RABL6Q3YEC7 729 aaPredicted RBP11.17□□□□□ -0.62
RPA1-201ENST00000254719 PODXL2Q9NZ53 605 aa11.17□□□□□ -0.62
RPA1-201ENST00000254719 SRGAP3O43295 1099 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 FOXO4P98177 505 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 KSR2Q6VAB6 950 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 JARID2Q92833 1246 aaPredicted RBP11.16□□□□□ -0.62
RPA1-201ENST00000254719 SYAP1Q96A49 352 aaPredicted RBP11.16□□□□□ -0.62
RPA1-201ENST00000254719 FAM227BQ96M60 508 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 UPF3BQ9BZI7 483 aaKnown RBP11.16□□□□□ -0.62
RPA1-201ENST00000254719 RBSNQ9H1K0 784 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 PRDM10Q9NQV6 1147 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 ZNF609O15014 1411 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 AP5Z1O43299 807 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 PTPN12Q05209 780 aaKnown RBP11.16□□□□□ -0.62
RPA1-201ENST00000254719 HYPKQ9NX55 129 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 COL5A3P25940 1745 aaPredicted RBP11.16□□□□□ -0.62
RPA1-201ENST00000254719 GNAI3P08754 354 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 GPATCH3Q96I76 525 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 SLC4A9Q96Q91 983 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 C19orf44Q9H6X5 657 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 GRPEL1Q9HAV7 217 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 BCORQ6W2J9 1755 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 PTMAP06454 111 aaKnown RBP11.16□□□□□ -0.62
RPA1-201ENST00000254719 KLHL40Q2TBA0 621 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 PDLIM2Q96JY6 352 aa11.16□□□□□ -0.62
RPA1-201ENST00000254719 DISP2A7MBM2 1401 aa11.15□□□□□ -0.62
RPA1-201ENST00000254719 PLEKHG2Q9H7P9 1386 aa11.15□□□□□ -0.62
RPA1-201ENST00000254719 ZNF445P59923 1031 aa11.15□□□□□ -0.62
RPA1-201ENST00000254719 BRINP3Q76B58 766 aa11.15□□□□□ -0.62
RPA1-201ENST00000254719 SRCIN1Q9C0H9 1055 aa11.15□□□□□ -0.62
RPA1-201ENST00000254719 DOT1LQ8TEK3 1739 aa11.15□□□□□ -0.62
RPA1-201ENST00000254719 CHRNA2Q15822 529 aa11.15□□□□□ -0.62
RPA1-201ENST00000254719 A0A0D9SFI3 127 aa11.15□□□□□ -0.63
RPA1-201ENST00000254719 ATG9AQ7Z3C6 839 aa11.15□□□□□ -0.63
RPA1-201ENST00000254719 DDX21Q9NR30 783 aaKnown RBP eCLIP11.15□□□□□ -0.63
RPA1-201ENST00000254719 SPG7Q9UQ90 795 aa11.15□□□□□ -0.63
RPA1-201ENST00000254719 KCNJ4P48050 445 aa11.14□□□□□ -0.63
RPA1-201ENST00000254719 REC8O95072 547 aa11.14□□□□□ -0.63
RPA1-201ENST00000254719 PPP1R9BQ96SB3 815 aa11.14□□□□□ -0.63
RPA1-201ENST00000254719 DBF4Q9UBU7 674 aaPredicted RBP11.14□□□□□ -0.63
RPA1-201ENST00000254719 KDM4FA0A1W2PPD8 638 aa11.14□□□□□ -0.63
RPA1-201ENST00000254719 UBTFL1P0CB47 393 aaPredicted RBP11.14□□□□□ -0.63
RPA1-201ENST00000254719 ZSCAN23Q3MJ62 389 aa11.14□□□□□ -0.63
RPA1-201ENST00000254719 FUCA2Q9BTY2 467 aa11.14□□□□□ -0.63
RPA1-201ENST00000254719 SOS2Q07890 1332 aaPredicted RBP11.14□□□□□ -0.63
RPA1-201ENST00000254719 PRIM1P49642 420 aaKnown RBP11.13□□□□□ -0.63
RPA1-201ENST00000254719 GCKRQ14397 625 aa11.13□□□□□ -0.63
RPA1-201ENST00000254719 LAMB2P55268 1798 aa11.13□□□□□ -0.63
RPA1-201ENST00000254719 DBNLQ9UJU6 430 aaKnown RBP11.13□□□□□ -0.63
RPA1-201ENST00000254719 TRHP20396 242 aaPredicted RBP11.13□□□□□ -0.63
RPA1-201ENST00000254719 CSPP1Q1MSJ5 1256 aa11.13□□□□□ -0.63
RPA1-201ENST00000254719 SURF6O75683 361 aaKnown RBP11.12□□□□□ -0.63
RPA1-201ENST00000254719 AK2P54819 239 aa11.12□□□□□ -0.63
RPA1-201ENST00000254719 TOB2Q14106 344 aaPredicted RBP11.12□□□□□ -0.63
RPA1-201ENST00000254719 AMOTQ4VCS5 1084 aa11.12□□□□□ -0.63
RPA1-201ENST00000254719 NEK4P51957 841 aa11.12□□□□□ -0.63
RPA1-201ENST00000254719 ANAPC15P60006 121 aa11.12□□□□□ -0.63
RPA1-201ENST00000254719 ZRSR1Q15695 479 aaKnown RBP11.12□□□□□ -0.63
RPA1-201ENST00000254719 FAM13BQ9NYF5 915 aa11.12□□□□□ -0.63
RPA1-201ENST00000254719 TULP1O00294 542 aaPredicted RBP11.12□□□□□ -0.63
RPA1-201ENST00000254719 GRM8O00222 908 aa11.11□□□□□ -0.63
RPA1-201ENST00000254719 NKX1-1Q15270 411 aaPredicted RBP11.11□□□□□ -0.63
RPA1-201ENST00000254719 USPL1Q5W0Q7 1092 aa11.11□□□□□ -0.63
RPA1-201ENST00000254719 LMOD2Q6P5Q4 547 aa11.11□□□□□ -0.63
RPA1-201ENST00000254719 MAP4K1Q92918 833 aa11.11□□□□□ -0.63
RPA1-201ENST00000254719 HSPA2P54652 639 aa11.11□□□□□ -0.63
RPA1-201ENST00000254719 STOX1Q6ZVD7 989 aa11.11□□□□□ -0.63
RPA1-201ENST00000254719 ZSWIM6Q9HCJ5 1215 aa11.11□□□□□ -0.63
RPA1-201ENST00000254719 RAB11FIP3O75154 756 aa11.11□□□□□ -0.63
RPA1-201ENST00000254719 LINS1Q8NG48 757 aa11.11□□□□□ -0.63
RPA1-201ENST00000254719 TPCN1Q9ULQ1 816 aa11.11□□□□□ -0.63
RPA1-201ENST00000254719 CHD4Q14839 1912 aa11.1□□□□□ -0.63
RPA1-201ENST00000254719 ME3Q16798 604 aa11.1□□□□□ -0.63
RPA1-201ENST00000254719 COPS6Q7L5N1 327 aa11.1□□□□□ -0.63
RPA1-201ENST00000254719 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.1□□□□□ -0.633e-6■■■□□ 15.8
RPA1-201ENST00000254719 ALDH1L1O75891 902 aa11.1□□□□□ -0.63
RPA1-201ENST00000254719 MSNP26038 577 aaKnown RBP11.1□□□□□ -0.63
RPA1-201ENST00000254719 XAGE3Q8WTP9 111 aa11.1□□□□□ -0.63
RPA1-201ENST00000254719 CHMP4CQ96CF2 233 aa11.1□□□□□ -0.63
RPA1-201ENST00000254719 SEC62Q99442 399 aaKnown RBP11.1□□□□□ -0.63
RPA1-201ENST00000254719 BCL9LQ86UU0 1499 aa11.1□□□□□ -0.63
RPA1-201ENST00000254719 TTLL7Q6ZT98 887 aa11.1□□□□□ -0.63
RPA1-201ENST00000254719 KIF1BPQ96EK5 621 aa11.1□□□□□ -0.63
RPA1-201ENST00000254719 INTS4Q96HW7 963 aaKnown RBP11.1□□□□□ -0.63
RPA1-201ENST00000254719 GDPD2Q9HCC8 539 aa11.1□□□□□ -0.63
RPA1-201ENST00000254719 BCL11BQ9C0K0 894 aaPredicted RBP11.09□□□□□ -0.63
RPA1-201ENST00000254719 NEDD4P46934 1319 aa11.09□□□□□ -0.63
RPA1-201ENST00000254719 TTC41PQ6P2S7 1318 aa11.09□□□□□ -0.63
RPA1-201ENST00000254719 RIC1Q4ADV7 1423 aa11.09□□□□□ -0.63
RPA1-201ENST00000254719 EPB41L2O43491 1005 aaKnown RBP11.09□□□□□ -0.63
RPA1-201ENST00000254719 PLEKHO1Q53GL0 409 aaPredicted RBP11.09□□□□□ -0.63
RPA1-201ENST00000254719 MCTP1Q6DN14 999 aa11.09□□□□□ -0.63
RPA1-201ENST00000254719 TMEM87AQ8NBN3 555 aa11.09□□□□□ -0.63
RPA1-201ENST00000254719 DDX54Q8TDD1 881 aaKnown RBP11.09□□□□□ -0.63
RPA1-201ENST00000254719 RILPL2Q969X0 211 aa11.09□□□□□ -0.63
RPA1-201ENST00000254719 METTL22Q9BUU2 404 aaPredicted RBP11.09□□□□□ -0.63
RPA1-201ENST00000254719 ZHX1Q9UKY1 873 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms