RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 ERC1Q8IUD2 1116 aa18.05■□□□□ 0.48
SAFB2-201ENST00000252542 CEMIPQ8WUJ3 1361 aa18.05■□□□□ 0.48
SAFB2-201ENST00000252542 SKOR2Q2VWA4 1001 aaPredicted RBP18.05■□□□□ 0.48
SAFB2-201ENST00000252542 CHST3Q7LGC8 479 aa18.05■□□□□ 0.48
SAFB2-201ENST00000252542 SYNE4Q8N205 404 aa18.05■□□□□ 0.48
SAFB2-201ENST00000252542 ACSBG1Q96GR2 724 aa18.05■□□□□ 0.48
SAFB2-201ENST00000252542 BTG4Q9NY30 223 aa18.05■□□□□ 0.48
SAFB2-201ENST00000252542 RBM8AQ9Y5S9 174 aaKnown RBP18.05■□□□□ 0.48
SAFB2-201ENST00000252542 PTMAP06454 111 aaKnown RBP18.05■□□□□ 0.48
SAFB2-201ENST00000252542 WASHC4Q2M389 1173 aa18.05■□□□□ 0.48
SAFB2-201ENST00000252542 POLA2Q14181 598 aa18.04■□□□□ 0.48
SAFB2-201ENST00000252542 KAZALD1Q96I82 304 aa18.04■□□□□ 0.48
SAFB2-201ENST00000252542 C1orf167Q5SNV9 1468 aa18.04■□□□□ 0.48
SAFB2-201ENST00000252542 A0A0D9SFI3 127 aa18.04■□□□□ 0.48
SAFB2-201ENST00000252542 METTL22Q9BUU2 404 aaPredicted RBP18.04■□□□□ 0.48
SAFB2-201ENST00000252542 BABAM1Q9NWV8 329 aa18.04■□□□□ 0.48
SAFB2-201ENST00000252542 TMOD3Q9NYL9 352 aa18.04■□□□□ 0.48
SAFB2-201ENST00000252542 CYP46A1Q9Y6A2 500 aa18.04■□□□□ 0.48
SAFB2-201ENST00000252542 COL9A3Q14050 684 aaPredicted RBP18.04■□□□□ 0.48
SAFB2-201ENST00000252542 PDIA6Q15084 440 aa18.04■□□□□ 0.48
SAFB2-201ENST00000252542 AKAP12Q02952 1782 aa18.03■□□□□ 0.48
SAFB2-201ENST00000252542 RRP9O43818 475 aaKnown RBP18.03■□□□□ 0.48
SAFB2-201ENST00000252542 ASAP1Q9ULH1 1129 aa18.03■□□□□ 0.48
SAFB2-201ENST00000252542 LARGE1O95461 756 aa18.03■□□□□ 0.48
SAFB2-201ENST00000252542 CWC22Q9HCG8 908 aaKnown RBP18.03■□□□□ 0.48
SAFB2-201ENST00000252542 TBC1D2BQ9UPU7 963 aa18.03■□□□□ 0.48
SAFB2-201ENST00000252542 HOXB7P09629 217 aa18.02■□□□□ 0.48
SAFB2-201ENST00000252542 KNDC1Q76NI1 1749 aa18.02■□□□□ 0.48
SAFB2-201ENST00000252542 STAP2Q9UGK3 403 aa18.02■□□□□ 0.48
SAFB2-201ENST00000252542 ZDHHC9Q9Y397 364 aa18.02■□□□□ 0.48
SAFB2-201ENST00000252542 TAF6LQ9Y6J9 622 aa18.02■□□□□ 0.47
SAFB2-201ENST00000252542 GADD45BO75293 160 aaPredicted RBP18.01■□□□□ 0.47
SAFB2-201ENST00000252542 FAM13BQ9NYF5 915 aa18.01■□□□□ 0.47
SAFB2-201ENST00000252542 CNPY2Q9Y2B0 182 aa18.01■□□□□ 0.47
SAFB2-201ENST00000252542 HAND2P61296 217 aa18.01■□□□□ 0.47
SAFB2-201ENST00000252542 DNAJC10Q8IXB1 793 aa18.01■□□□□ 0.47
SAFB2-201ENST00000252542 EVI5LQ96CN4 794 aa18.01■□□□□ 0.47
SAFB2-201ENST00000252542 PUS3Q9BZE2 481 aaKnown RBP18.01■□□□□ 0.47
SAFB2-201ENST00000252542 PRIM1P49642 420 aaKnown RBP18■□□□□ 0.47
SAFB2-201ENST00000252542 LRRC24Q50LG9 513 aa18■□□□□ 0.47
SAFB2-201ENST00000252542 ZNF589Q86UQ0 364 aaPredicted RBP18■□□□□ 0.47
SAFB2-201ENST00000252542 HELBQ8NG08 1087 aaPredicted RBP18■□□□□ 0.47
SAFB2-201ENST00000252542 FBXW7Q969H0 707 aa18■□□□□ 0.47
SAFB2-201ENST00000252542 IL2RBP14784 551 aa18■□□□□ 0.47
SAFB2-201ENST00000252542 TFIP11Q9UBB9 837 aaKnown RBP18■□□□□ 0.47
SAFB2-201ENST00000252542 ZSCAN23Q3MJ62 389 aa18■□□□□ 0.47
SAFB2-201ENST00000252542 HSPA4P34932 840 aa17.99■□□□□ 0.47
SAFB2-201ENST00000252542 DBNLQ9UJU6 430 aaKnown RBP17.99■□□□□ 0.47
SAFB2-201ENST00000252542 R3HCC1Q9Y3T6 440 aaKnown RBP17.99■□□□□ 0.47
SAFB2-201ENST00000252542 GOLGA6L4A6NEF3 574 aa17.99■□□□□ 0.47
SAFB2-201ENST00000252542 GJB2P29033 226 aa17.99■□□□□ 0.47
SAFB2-201ENST00000252542 KCNQ4P56696 695 aa17.99■□□□□ 0.47
SAFB2-201ENST00000252542 CCDC57Q2TAC2 916 aa17.99■□□□□ 0.47
SAFB2-201ENST00000252542 BLOC1S2Q6QNY1 142 aa17.99■□□□□ 0.47
SAFB2-201ENST00000252542 LMBRD1Q9NUN5 540 aa17.99■□□□□ 0.47
SAFB2-201ENST00000252542 NBPF26B4DH59 902 aa17.99■□□□□ 0.47
SAFB2-201ENST00000252542 APPP05067 770 aa17.99■□□□□ 0.47
SAFB2-201ENST00000252542 NBPF14Q5TI25 921 aa17.99■□□□□ 0.47
SAFB2-201ENST00000252542 NBPF10Q6P3W6 841 aaKnown RBP17.99■□□□□ 0.47
SAFB2-201ENST00000252542 NBPF15Q8N660 670 aa17.99■□□□□ 0.47
SAFB2-201ENST00000252542 LSG1Q9H089 658 aaKnown RBP17.99■□□□□ 0.47
SAFB2-201ENST00000252542 LIMCH1Q9UPQ0 1083 aa17.99■□□□□ 0.47
SAFB2-201ENST00000252542 GUCY1B3Q02153 619 aa17.98■□□□□ 0.47
SAFB2-201ENST00000252542 CWC25Q9NXE8 425 aaPredicted RBP17.98■□□□□ 0.47
SAFB2-201ENST00000252542 RUFY3Q7L099 469 aa17.98■□□□□ 0.47
SAFB2-201ENST00000252542 RAD50Q92878 1312 aa17.98■□□□□ 0.47
SAFB2-201ENST00000252542 CREB3L3Q68CJ9 461 aa17.97■□□□□ 0.47
SAFB2-201ENST00000252542 GPT2Q8TD30 523 aa17.97■□□□□ 0.47
SAFB2-201ENST00000252542 SALL3Q9BXA9 1300 aa17.97■□□□□ 0.47
SAFB2-201ENST00000252542 CCT2P78371 535 aaKnown RBP17.97■□□□□ 0.47
SAFB2-201ENST00000252542 LARP1BQ659C4 914 aaKnown RBP17.97■□□□□ 0.47
SAFB2-201ENST00000252542 DDIT3P35638 169 aa17.97■□□□□ 0.47
SAFB2-201ENST00000252542 MCM2P49736 904 aa17.97■□□□□ 0.47
SAFB2-201ENST00000252542 SPATA31A3Q5VYP0 1347 aa17.97■□□□□ 0.47
SAFB2-201ENST00000252542 KLHL40Q2TBA0 621 aa17.96■□□□□ 0.47
SAFB2-201ENST00000252542 TNNI3KQ59H18 835 aa17.96■□□□□ 0.47
SAFB2-201ENST00000252542 USP48Q86UV5 1035 aa17.96■□□□□ 0.47
SAFB2-201ENST00000252542 FPGT-TNNI3KV9GXZ4 949 aa17.96■□□□□ 0.47
SAFB2-201ENST00000252542 TMEM63CQ9P1W3 806 aa17.96■□□□□ 0.47
SAFB2-201ENST00000252542 CAMK4Q16566 473 aa17.95■□□□□ 0.46
SAFB2-201ENST00000252542 RNF20Q5VTR2 975 aa17.95■□□□□ 0.46
SAFB2-201ENST00000252542 PI16Q6UXB8 463 aa17.95■□□□□ 0.46
SAFB2-201ENST00000252542 BICDL1Q6ZP65 573 aa17.95■□□□□ 0.46
SAFB2-201ENST00000252542 CHMP4CQ96CF2 233 aa17.95■□□□□ 0.46
SAFB2-201ENST00000252542 CNNM1Q9NRU3 951 aa17.95■□□□□ 0.46
SAFB2-201ENST00000252542 TOMM22Q9NS69 142 aa17.95■□□□□ 0.46
SAFB2-201ENST00000252542 CEP126Q9P2H0 1117 aa17.95■□□□□ 0.46
SAFB2-201ENST00000252542 SNAP23O00161 211 aa17.95■□□□□ 0.46
SAFB2-201ENST00000252542 IFIT1P09914 478 aaKnown RBP17.95■□□□□ 0.46
SAFB2-201ENST00000252542 SYT1P21579 422 aa17.95■□□□□ 0.46
SAFB2-201ENST00000252542 DNM1Q05193 864 aaKnown RBP17.95■□□□□ 0.46
SAFB2-201ENST00000252542 PTPN12Q05209 780 aaKnown RBP17.95■□□□□ 0.46
SAFB2-201ENST00000252542 CCDC171Q6TFL3 1326 aa17.95■□□□□ 0.46
SAFB2-201ENST00000252542 CCDC173Q0VFZ6 552 aa17.94■□□□□ 0.46
SAFB2-201ENST00000252542 IQSEC3Q9UPP2 1182 aaPredicted RBP17.94■□□□□ 0.46
SAFB2-201ENST00000252542 MEGF6O75095 1541 aa17.94■□□□□ 0.46
SAFB2-201ENST00000252542 STX6O43752 255 aa17.94■□□□□ 0.46
SAFB2-201ENST00000252542 KIF6Q6ZMV9 814 aa17.94■□□□□ 0.46
SAFB2-201ENST00000252542 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.94■□□□□ 0.46
SAFB2-201ENST00000252542 TTC41PQ6P2S7 1318 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms