RNA–Protein interactions for RNA: ENST00000245923.8

RTN2-201, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 2,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-201ENST00000245923 RPAP1Q9BWH6 1393 aaPredicted RBP31.66■■■□□ 2.66
RTN2-201ENST00000245923 ZSWIM6Q9HCJ5 1215 aa31.65■■■□□ 2.66
RTN2-201ENST00000245923 RFX5P48382 616 aaPredicted RBP31.65■■■□□ 2.66
RTN2-201ENST00000245923 RABL6Q3YEC7 729 aaPredicted RBP31.65■■■□□ 2.66
RTN2-201ENST00000245923 VPS53Q5VIR6 699 aa31.65■■■□□ 2.66
RTN2-201ENST00000245923 PRPF40BQ6NWY9 871 aaKnown RBP31.65■■■□□ 2.66
RTN2-201ENST00000245923 PPP1R9BQ96SB3 815 aa31.65■■■□□ 2.66
RTN2-201ENST00000245923 RBM27Q9P2N5 1060 aaKnown RBP31.65■■■□□ 2.66
RTN2-201ENST00000245923 CCDC173Q0VFZ6 552 aa31.64■■■□□ 2.66
RTN2-201ENST00000245923 NMIQ13287 307 aaPredicted RBP31.64■■■□□ 2.66
RTN2-201ENST00000245923 TMEM63CQ9P1W3 806 aa31.64■■■□□ 2.66
RTN2-201ENST00000245923 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.64■■■□□ 2.66
RTN2-201ENST00000245923 PIP4K2AP48426 406 aaPredicted RBP31.63■■■□□ 2.65
RTN2-201ENST00000245923 MAP4K1Q92918 833 aa31.63■■■□□ 2.65
RTN2-201ENST00000245923 FAM227BQ96M60 508 aa31.63■■■□□ 2.65
RTN2-201ENST00000245923 NSFL1CQ9UNZ2 370 aaKnown RBP31.63■■■□□ 2.65
RTN2-201ENST00000245923 JAKMIP1Q96N16 626 aaKnown RBP31.63■■■□□ 2.65
RTN2-201ENST00000245923 ADCK5Q3MIX3 580 aa31.62■■■□□ 2.65
RTN2-201ENST00000245923 PLBD2Q8NHP8 589 aa31.62■■■□□ 2.65
RTN2-201ENST00000245923 BOLA2Q9H3K6 86 aa31.62■■■□□ 2.65
RTN2-201ENST00000245923 ERBB4Q15303 1308 aa31.62■■■□□ 2.65
RTN2-201ENST00000245923 RBM8AQ9Y5S9 174 aaKnown RBP31.61■■■□□ 2.65
RTN2-201ENST00000245923 UBR2Q8IWV8 1755 aa31.61■■■□□ 2.65
RTN2-201ENST00000245923 CPA1P15085 419 aa31.61■■■□□ 2.65
RTN2-201ENST00000245923 PTPN12Q05209 780 aaKnown RBP31.61■■■□□ 2.65
RTN2-201ENST00000245923 CYP46A1Q9Y6A2 500 aa31.61■■■□□ 2.65
RTN2-201ENST00000245923 CLCN1P35523 988 aa31.6■■■□□ 2.65
RTN2-201ENST00000245923 PDRG1Q9NUG6 133 aa31.6■■■□□ 2.65
RTN2-201ENST00000245923 TCHHQ07283 1943 aa31.6■■■□□ 2.65
RTN2-201ENST00000245923 ZKSCAN1P17029 563 aaPredicted RBP31.6■■■□□ 2.65
RTN2-201ENST00000245923 UBE3BQ7Z3V4 1068 aa31.6■■■□□ 2.65
RTN2-201ENST00000245923 TRIM44Q96DX7 344 aaPredicted RBP31.6■■■□□ 2.65
RTN2-201ENST00000245923 PRIM1P49642 420 aaKnown RBP31.59■■■□□ 2.65
RTN2-201ENST00000245923 CREB3L3Q68CJ9 461 aa31.59■■■□□ 2.65
RTN2-201ENST00000245923 ZSCAN31Q96LW9 406 aaPredicted RBP31.59■■■□□ 2.65
RTN2-201ENST00000245923 FSD1Q9BTV5 496 aa31.59■■■□□ 2.65
RTN2-201ENST00000245923 WDR17Q8IZU2 1322 aa31.59■■■□□ 2.65
RTN2-201ENST00000245923 CASP7P55210 303 aa31.59■■■□□ 2.65
RTN2-201ENST00000245923 BRINP3Q76B58 766 aa31.59■■■□□ 2.65
RTN2-201ENST00000245923 ANP32BQ92688 251 aaKnown RBP31.59■■■□□ 2.65
RTN2-201ENST00000245923 MED23Q9ULK4 1368 aa31.59■■■□□ 2.65
RTN2-201ENST00000245923 LRSAM1Q6UWE0 723 aa31.58■■■□□ 2.65
RTN2-201ENST00000245923 PCDH11XQ9BZA7 1347 aa31.58■■■□□ 2.65
RTN2-201ENST00000245923 PCDH11YQ9BZA8 1340 aa31.58■■■□□ 2.65
RTN2-201ENST00000245923 A0A0D9SFI3 127 aa31.58■■■□□ 2.65
RTN2-201ENST00000245923 JARID2Q92833 1246 aaPredicted RBP31.58■■■□□ 2.65
RTN2-201ENST00000245923 RBSNQ9H1K0 784 aa31.58■■■□□ 2.65
RTN2-201ENST00000245923 SH2B1Q9NRF2 756 aaPredicted RBP31.58■■■□□ 2.65
RTN2-201ENST00000245923 A0A087WZG4 1122 aa31.57■■■□□ 2.64
RTN2-201ENST00000245923 LARP6Q9BRS8 491 aaKnown RBP31.57■■■□□ 2.64
RTN2-201ENST00000245923 JCADQ9P266 1359 aa31.57■■■□□ 2.64
RTN2-201ENST00000245923 ESPNB1AK53 854 aa31.56■■■□□ 2.64
RTN2-201ENST00000245923 LARGE1O95461 756 aa31.56■■■□□ 2.64
RTN2-201ENST00000245923 ZSCAN22P10073 491 aaPredicted RBP31.56■■■□□ 2.64
RTN2-201ENST00000245923 ATP5JP18859 108 aa31.56■■■□□ 2.64
RTN2-201ENST00000245923 TNNI3KQ59H18 835 aa31.56■■■□□ 2.64
RTN2-201ENST00000245923 SMC3Q9UQE7 1217 aa31.56■■■□□ 2.64
RTN2-201ENST00000245923 FPGT-TNNI3KV9GXZ4 949 aa31.56■■■□□ 2.64
RTN2-201ENST00000245923 NUP188Q5SRE5 1749 aa31.56■■■□□ 2.64
RTN2-201ENST00000245923 ATP5J2-PTCD1G3V325 749 aa31.56■■■□□ 2.64
RTN2-201ENST00000245923 PTCD1O75127 700 aaKnown RBP31.56■■■□□ 2.64
RTN2-201ENST00000245923 TMEM87AQ8NBN3 555 aa31.56■■■□□ 2.64
RTN2-201ENST00000245923 ZCRB1Q8TBF4 217 aaKnown RBP31.55■■■□□ 2.64
RTN2-201ENST00000245923 PAPPAQ13219 1627 aa31.55■■■□□ 2.64
RTN2-201ENST00000245923 SYT1P21579 422 aa31.55■■■□□ 2.64
RTN2-201ENST00000245923 DBNLQ9UJU6 430 aaKnown RBP31.55■■■□□ 2.64
RTN2-201ENST00000245923 NBPF26B4DH59 902 aa31.54■■■□□ 2.64
RTN2-201ENST00000245923 SLC27A2O14975 620 aa31.54■■■□□ 2.64
RTN2-201ENST00000245923 STX6O43752 255 aa31.54■■■□□ 2.64
RTN2-201ENST00000245923 KCNJ4P48050 445 aa31.54■■■□□ 2.64
RTN2-201ENST00000245923 TFCP2Q12800 502 aa31.54■■■□□ 2.64
RTN2-201ENST00000245923 NBPF14Q5TI25 921 aa31.54■■■□□ 2.64
RTN2-201ENST00000245923 NBPF10Q6P3W6 841 aaKnown RBP31.54■■■□□ 2.64
RTN2-201ENST00000245923 NBPF15Q8N660 670 aa31.54■■■□□ 2.64
RTN2-201ENST00000245923 ERVV-2B6SEH9 535 aa31.54■■■□□ 2.64
RTN2-201ENST00000245923 SYCE3A1L190 88 aa31.53■■■□□ 2.64
RTN2-201ENST00000245923 PRDM11Q9NQV5 511 aa31.53■■■□□ 2.64
RTN2-201ENST00000245923 USP48Q86UV5 1035 aa31.52■■■□□ 2.64
RTN2-201ENST00000245923 COL5A2P05997 1499 aaPredicted RBP31.52■■■□□ 2.64
RTN2-201ENST00000245923 KCPQ6ZWJ8 1503 aa31.52■■■□□ 2.64
RTN2-201ENST00000245923 PSMA5P28066 241 aa31.52■■■□□ 2.64
RTN2-201ENST00000245923 RFX7Q2KHR2 1363 aa31.52■■■□□ 2.64
RTN2-201ENST00000245923 H7C1W4 665 aa31.51■■■□□ 2.63
RTN2-201ENST00000245923 NKX1-1Q15270 411 aaPredicted RBP31.51■■■□□ 2.63
RTN2-201ENST00000245923 RNF20Q5VTR2 975 aa31.51■■■□□ 2.63
RTN2-201ENST00000245923 TOM1L2Q6ZVM7 507 aa31.51■■■□□ 2.63
RTN2-201ENST00000245923 CCDC83Q8IWF9 413 aa31.51■■■□□ 2.63
RTN2-201ENST00000245923 SYAP1Q96A49 352 aaPredicted RBP31.51■■■□□ 2.63
RTN2-201ENST00000245923 TJP1Q07157 1748 aa31.5■■■□□ 2.63
RTN2-201ENST00000245923 HSPA2P54652 639 aa31.5■■■□□ 2.63
RTN2-201ENST00000245923 FOXD4L6Q3SYB3 417 aaPredicted RBP31.5■■■□□ 2.63
RTN2-201ENST00000245923 FOXD4L3Q6VB84 417 aaPredicted RBP31.5■■■□□ 2.63
RTN2-201ENST00000245923 SOS2Q07890 1332 aaPredicted RBP31.49■■■□□ 2.63
RTN2-201ENST00000245923 SHANK3Q9BYB0 1731 aa31.49■■■□□ 2.63
RTN2-201ENST00000245923 GDPD2Q9HCC8 539 aa31.49■■■□□ 2.63
RTN2-201ENST00000245923 GADD45BO75293 160 aaPredicted RBP31.49■■■□□ 2.63
RTN2-201ENST00000245923 F13A1P00488 732 aa31.49■■■□□ 2.63
RTN2-201ENST00000245923 FOXO4P98177 505 aa31.49■■■□□ 2.63
RTN2-201ENST00000245923 GJB2P29033 226 aa31.48■■■□□ 2.63
RTN2-201ENST00000245923 ST3GAL1Q11201 340 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms