RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 IQSEC3Q9UPP2 1182 aaPredicted RBP10.85□□□□□ -0.67
COL21A1-201ENST00000244728 IGHMBP2P38935 993 aaKnown RBP10.84□□□□□ -0.67
COL21A1-201ENST00000244728 LMBR1LQ6UX01 489 aa10.84□□□□□ -0.67
COL21A1-201ENST00000244728 SIRT2Q8IXJ6 389 aa10.84□□□□□ -0.67
COL21A1-201ENST00000244728 KIF18AQ8NI77 898 aa10.84□□□□□ -0.67
COL21A1-201ENST00000244728 DACT1Q9NYF0 836 aa10.84□□□□□ -0.67
COL21A1-201ENST00000244728 TTLL5Q6EMB2 1281 aa10.84□□□□□ -0.67
COL21A1-201ENST00000244728 NOC3LQ8WTT2 800 aaKnown RBP10.84□□□□□ -0.67
COL21A1-201ENST00000244728 TPM1P09493 284 aa10.84□□□□□ -0.67
COL21A1-201ENST00000244728 PDIA4P13667 645 aaKnown RBP10.84□□□□□ -0.67
COL21A1-201ENST00000244728 XBP1P17861 261 aa10.84□□□□□ -0.67
COL21A1-201ENST00000244728 ATP8B2P98198 1209 aa10.84□□□□□ -0.67
COL21A1-201ENST00000244728 TTC37Q6PGP7 1564 aa10.83□□□□□ -0.68
COL21A1-201ENST00000244728 HOXC9P31274 260 aa10.83□□□□□ -0.68
COL21A1-201ENST00000244728 HOOK1Q9UJC3 728 aaKnown RBP10.83□□□□□ -0.68
COL21A1-201ENST00000244728 PIK3R4Q99570 1358 aa10.83□□□□□ -0.68
COL21A1-201ENST00000244728 CDC42BPAQ5VT25 1732 aa10.83□□□□□ -0.68
COL21A1-201ENST00000244728 CCDC69A6NI79 296 aa10.83□□□□□ -0.68
COL21A1-201ENST00000244728 RIOK3O14730 519 aaKnown RBP10.83□□□□□ -0.68
COL21A1-201ENST00000244728 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL21A1-201ENST00000244728 V9GYY5 206 aaPredicted RBP10.83□□□□□ -0.68
COL21A1-201ENST00000244728 CLASP1Q7Z460 1538 aa10.83□□□□□ -0.68
COL21A1-201ENST00000244728 TYRO3Q06418 890 aa10.83□□□□□ -0.68
COL21A1-201ENST00000244728 SLC4A8Q2Y0W8 1093 aa10.83□□□□□ -0.68
COL21A1-201ENST00000244728 LUZP1Q86V48 1076 aa10.83□□□□□ -0.68
COL21A1-201ENST00000244728 PALD1Q9ULE6 856 aa10.83□□□□□ -0.68
COL21A1-201ENST00000244728 NSFL1CQ9UNZ2 370 aaKnown RBP10.83□□□□□ -0.68
COL21A1-201ENST00000244728 FLT4P35916 1363 aa10.83□□□□□ -0.68
COL21A1-201ENST00000244728 CEP135Q66GS9 1140 aa10.83□□□□□ -0.68
COL21A1-201ENST00000244728 ZCRB1Q8TBF4 217 aaKnown RBP10.83□□□□□ -0.68
COL21A1-201ENST00000244728 GTPBP4Q9BZE4 634 aaKnown RBP10.83□□□□□ -0.68
COL21A1-201ENST00000244728 SERPINC1P01008 464 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 U2AF2P26368 475 aaKnown RBP eCLIP10.82□□□□□ -0.68
COL21A1-201ENST00000244728 IMMTQ16891 758 aaKnown RBP10.82□□□□□ -0.68
COL21A1-201ENST00000244728 TAF3Q5VWG9 929 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 TRIM22Q8IYM9 498 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 TRERF1Q96PN7 1200 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 UBAC1Q9BSL1 405 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 CTNNA3Q9UI47 895 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 TBX22Q9Y458 520 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 CTDP1Q9Y5B0 961 aaPredicted RBP10.82□□□□□ -0.68
COL21A1-201ENST00000244728 ABCC1P33527 1531 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 GRM8O00222 908 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 OLFM4Q6UX06 510 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 UBXN4Q92575 508 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 DNAJC25Q9H1X3 360 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 BRMS1Q9HCU9 246 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 ZFYVE9O95405 1425 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 KRT32Q14532 448 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 KLHDC4Q8TBB5 520 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 KIF2CQ99661 725 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 C19orf44Q9H6X5 657 aa10.82□□□□□ -0.68
COL21A1-201ENST00000244728 CWC25Q9NXE8 425 aaPredicted RBP10.82□□□□□ -0.68
COL21A1-201ENST00000244728 U3KPZ7 1027 aaPredicted RBP10.82□□□□□ -0.68
COL21A1-201ENST00000244728 SFPQP23246 707 aaKnown RBP eCLIP10.81□□□□□ -0.68
COL21A1-201ENST00000244728 AKAP4Q5JQC9 854 aa10.81□□□□□ -0.68
COL21A1-201ENST00000244728 CCDC144CPQ8IYA2 1237 aa10.81□□□□□ -0.68
COL21A1-201ENST00000244728 ANKRD20A12PQ8NF67 263 aa10.81□□□□□ -0.68
COL21A1-201ENST00000244728 PAXBP1Q9Y5B6 917 aa10.81□□□□□ -0.68
COL21A1-201ENST00000244728 RBM5P52756 815 aaKnown RBP eCLIP10.81□□□□□ -0.68
COL21A1-201ENST00000244728 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
COL21A1-201ENST00000244728 YEATS2Q9ULM3 1422 aa10.81□□□□□ -0.68
COL21A1-201ENST00000244728 UGGT1Q9NYU2 1555 aa10.81□□□□□ -0.68
COL21A1-201ENST00000244728 KSR2Q6VAB6 950 aa10.81□□□□□ -0.68
COL21A1-201ENST00000244728 ANO10Q9NW15 660 aa10.81□□□□□ -0.68
COL21A1-201ENST00000244728 ZNF219Q9P2Y4 722 aaPredicted RBP10.81□□□□□ -0.68
COL21A1-201ENST00000244728 TCEAL9Q9UHQ7 104 aa10.81□□□□□ -0.68
COL21A1-201ENST00000244728 ABCA8O94911 1581 aa10.81□□□□□ -0.68
COL21A1-201ENST00000244728 ATP7AQ04656 1500 aa10.81□□□□□ -0.68
COL21A1-201ENST00000244728 CROCC2H7BZ55 1655 aa10.8□□□□□ -0.68
COL21A1-201ENST00000244728 FAM173BQ6P4H8 233 aa10.8□□□□□ -0.68
COL21A1-201ENST00000244728 NAPBQ9H115 298 aa10.8□□□□□ -0.68
COL21A1-201ENST00000244728 AKAP2Q9Y2D5 859 aa10.8□□□□□ -0.68
COL21A1-201ENST00000244728 IPO7O95373 1038 aaKnown RBP10.8□□□□□ -0.68
COL21A1-201ENST00000244728 ZSCAN25Q6NSZ9 544 aa10.8□□□□□ -0.68
COL21A1-201ENST00000244728 HELBQ8NG08 1087 aaPredicted RBP10.8□□□□□ -0.68
COL21A1-201ENST00000244728 CCDC47Q96A33 483 aaKnown RBP10.8□□□□□ -0.68
COL21A1-201ENST00000244728 EVI5LQ96CN4 794 aa10.8□□□□□ -0.68
COL21A1-201ENST00000244728 NPHP3Q7Z494 1330 aa10.8□□□□□ -0.68
COL21A1-201ENST00000244728 KIF2AO00139 706 aaPredicted RBP10.8□□□□□ -0.68
COL21A1-201ENST00000244728 CCP110O43303 1012 aa10.8□□□□□ -0.68
COL21A1-201ENST00000244728 ADCY10Q96PN6 1610 aa10.8□□□□□ -0.68
COL21A1-201ENST00000244728 SKILP12757 684 aa10.8□□□□□ -0.68
COL21A1-201ENST00000244728 ZSCAN29Q8IWY8 852 aaPredicted RBP10.8□□□□□ -0.68
COL21A1-201ENST00000244728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.8□□□□□ -0.68
COL21A1-201ENST00000244728 PNMA6EA0A0J9YXQ4 647 aa10.79□□□□□ -0.68
COL21A1-201ENST00000244728 ANKRD18BA2A2Z9 1011 aa10.79□□□□□ -0.68
COL21A1-201ENST00000244728 ZPR1O75312 459 aa10.79□□□□□ -0.68
COL21A1-201ENST00000244728 NBPF6Q5VWK0 638 aa10.79□□□□□ -0.68
COL21A1-201ENST00000244728 KRT222Q8N1A0 295 aa10.79□□□□□ -0.68
COL21A1-201ENST00000244728 NBPF4Q96M43 638 aa10.79□□□□□ -0.68
COL21A1-201ENST00000244728 RBM8AQ9Y5S9 174 aaKnown RBP10.79□□□□□ -0.68
COL21A1-201ENST00000244728 SLC3A2P08195 630 aaKnown RBP10.79□□□□□ -0.68
COL21A1-201ENST00000244728 TMCO3Q6UWJ1 677 aa10.79□□□□□ -0.68
COL21A1-201ENST00000244728 TRPM2O94759 1503 aa10.79□□□□□ -0.68
COL21A1-201ENST00000244728 RTL1A6NKG5 1358 aa10.79□□□□□ -0.68
COL21A1-201ENST00000244728 RANBP6O60518 1105 aaKnown RBP10.79□□□□□ -0.68
COL21A1-201ENST00000244728 NEMFO60524 1076 aa10.79□□□□□ -0.68
COL21A1-201ENST00000244728 HSP90B2PQ58FF3 399 aa10.79□□□□□ -0.68
COL21A1-201ENST00000244728 HSP90AB3PQ58FF7 597 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms