RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 STX6O43752 255 aa17.28■□□□□ 0.36
HIF3A-202ENST00000244303 IGKV5-2P06315 115 aa17.28■□□□□ 0.36
HIF3A-202ENST00000244303 SYT1P21579 422 aa17.28■□□□□ 0.36
HIF3A-202ENST00000244303 G3BP1Q13283 466 aaKnown RBP eCLIP17.28■□□□□ 0.36
HIF3A-202ENST00000244303 HS1BP3Q53T59 392 aa17.28■□□□□ 0.36
HIF3A-202ENST00000244303 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
HIF3A-202ENST00000244303 CCDC8Q9H0W5 538 aaPredicted RBP17.28■□□□□ 0.36
HIF3A-202ENST00000244303 SMC3Q9UQE7 1217 aa17.28■□□□□ 0.36
HIF3A-202ENST00000244303 ABCC6O95255 1503 aa17.28■□□□□ 0.36
HIF3A-202ENST00000244303 CCDC171Q6TFL3 1326 aa17.27■□□□□ 0.36
HIF3A-202ENST00000244303 TSPY26PQ9H489 355 aa17.27■□□□□ 0.36
HIF3A-202ENST00000244303 PDRG1Q9NUG6 133 aa17.27■□□□□ 0.36
HIF3A-202ENST00000244303 CNPY2Q9Y2B0 182 aa17.27■□□□□ 0.36
HIF3A-202ENST00000244303 XIRP1Q702N8 1843 aaKnown RBP17.27■□□□□ 0.36
HIF3A-202ENST00000244303 CYP27B1O15528 508 aa17.27■□□□□ 0.35
HIF3A-202ENST00000244303 MYL6BP14649 208 aa17.27■□□□□ 0.35
HIF3A-202ENST00000244303 NECTIN1Q15223 517 aa17.27■□□□□ 0.35
HIF3A-202ENST00000244303 VPS53Q5VIR6 699 aa17.27■□□□□ 0.35
HIF3A-202ENST00000244303 TMEM87AQ8NBN3 555 aa17.27■□□□□ 0.35
HIF3A-202ENST00000244303 KCNB2Q92953 911 aa17.27■□□□□ 0.35
HIF3A-202ENST00000244303 FAM227BQ96M60 508 aa17.27■□□□□ 0.35
HIF3A-202ENST00000244303 SIL1Q9H173 461 aa17.27■□□□□ 0.35
HIF3A-202ENST00000244303 TLR7Q9NYK1 1049 aaKnown RBP17.27■□□□□ 0.35
HIF3A-202ENST00000244303 CCDC83Q8IWF9 413 aa17.26■□□□□ 0.35
HIF3A-202ENST00000244303 DCAF5Q96JK2 942 aa17.26■□□□□ 0.35
HIF3A-202ENST00000244303 ZSWIM6Q9HCJ5 1215 aa17.26■□□□□ 0.35
HIF3A-202ENST00000244303 TM6SF1Q9BZW5 370 aa17.26■□□□□ 0.35
HIF3A-202ENST00000244303 CYP46A1Q9Y6A2 500 aa17.26■□□□□ 0.35
HIF3A-202ENST00000244303 AFDNP55196 1824 aaKnown RBP17.26■□□□□ 0.35
HIF3A-202ENST00000244303 F13A1P00488 732 aa17.25■□□□□ 0.35
HIF3A-202ENST00000244303 NMIQ13287 307 aaPredicted RBP17.25■□□□□ 0.35
HIF3A-202ENST00000244303 LARP1Q6PKG0 1096 aaKnown RBP17.25■□□□□ 0.35
HIF3A-202ENST00000244303 KLHDC4Q8TBB5 520 aa17.25■□□□□ 0.35
HIF3A-202ENST00000244303 DDX54Q8TDD1 881 aaKnown RBP17.25■□□□□ 0.35
HIF3A-202ENST00000244303 RBM8AQ9Y5S9 174 aaKnown RBP17.25■□□□□ 0.35
HIF3A-202ENST00000244303 PLEKHG2Q9H7P9 1386 aa17.25■□□□□ 0.35
HIF3A-202ENST00000244303 NEURL1BA8MQ27 555 aa17.24■□□□□ 0.35
HIF3A-202ENST00000244303 DTNBO60941 627 aa17.24■□□□□ 0.35
HIF3A-202ENST00000244303 ZNF496Q96IT1 587 aaPredicted RBP17.24■□□□□ 0.35
HIF3A-202ENST00000244303 NOL7Q9UMY1 257 aaKnown RBP17.24■□□□□ 0.35
HIF3A-202ENST00000244303 PHF14O94880 888 aa17.24■□□□□ 0.35
HIF3A-202ENST00000244303 GJB2P29033 226 aa17.24■□□□□ 0.35
HIF3A-202ENST00000244303 NEXNQ0ZGT2 675 aa17.24■□□□□ 0.35
HIF3A-202ENST00000244303 CREB3L3Q68CJ9 461 aa17.24■□□□□ 0.35
HIF3A-202ENST00000244303 XAGE3Q8WTP9 111 aa17.24■□□□□ 0.35
HIF3A-202ENST00000244303 BOLA2Q9H3K6 86 aa17.24■□□□□ 0.35
HIF3A-202ENST00000244303 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.24■□□□□ 0.35
HIF3A-202ENST00000244303 HIP1O00291 1037 aa17.23■□□□□ 0.35
HIF3A-202ENST00000244303 ZKSCAN1P17029 563 aaPredicted RBP17.23■□□□□ 0.35
HIF3A-202ENST00000244303 KCNJ4P48050 445 aa17.23■□□□□ 0.35
HIF3A-202ENST00000244303 GCKRQ14397 625 aa17.23■□□□□ 0.35
HIF3A-202ENST00000244303 TPRNQ4KMQ1 711 aa17.23■□□□□ 0.35
HIF3A-202ENST00000244303 COPS6Q7L5N1 327 aa17.23■□□□□ 0.35
HIF3A-202ENST00000244303 MAP4K1Q92918 833 aa17.23■□□□□ 0.35
HIF3A-202ENST00000244303 ZSCAN31Q96LW9 406 aaPredicted RBP17.23■□□□□ 0.35
HIF3A-202ENST00000244303 MYD88Q99836 296 aa17.23■□□□□ 0.35
HIF3A-202ENST00000244303 SH2B1Q9NRF2 756 aaPredicted RBP17.23■□□□□ 0.35
HIF3A-202ENST00000244303 A0A0D9SFI3 127 aa17.22■□□□□ 0.35
HIF3A-202ENST00000244303 ST3GAL1Q11201 340 aa17.22■□□□□ 0.35
HIF3A-202ENST00000244303 ME3Q16798 604 aa17.22■□□□□ 0.35
HIF3A-202ENST00000244303 EPHA10Q5JZY3 1008 aa17.22■□□□□ 0.35
HIF3A-202ENST00000244303 FSD1Q9BTV5 496 aa17.22■□□□□ 0.35
HIF3A-202ENST00000244303 SLAIN2Q9P270 581 aa17.22■□□□□ 0.35
HIF3A-202ENST00000244303 MRC1P22897 1456 aa17.22■□□□□ 0.35
HIF3A-202ENST00000244303 TTC5Q8N0Z6 440 aa17.22■□□□□ 0.35
HIF3A-202ENST00000244303 METTL22Q9BUU2 404 aaPredicted RBP17.22■□□□□ 0.35
HIF3A-202ENST00000244303 USP16Q9Y5T5 823 aa17.22■□□□□ 0.35
HIF3A-202ENST00000244303 PKD1L3Q7Z443 1732 aa17.21■□□□□ 0.35
HIF3A-202ENST00000244303 FIBPO43427 364 aa17.21■□□□□ 0.35
HIF3A-202ENST00000244303 TPM2P07951 284 aa17.21■□□□□ 0.35
HIF3A-202ENST00000244303 SNRPA1P09661 255 aaKnown RBP17.21■□□□□ 0.35
HIF3A-202ENST00000244303 CCDC183Q5T5S1 534 aa17.21■□□□□ 0.35
HIF3A-202ENST00000244303 VSIG10Q8N0Z9 540 aa17.21■□□□□ 0.35
HIF3A-202ENST00000244303 PRDM11Q9NQV5 511 aa17.21■□□□□ 0.35
HIF3A-202ENST00000244303 SNRKQ9NRH2 765 aa17.21■□□□□ 0.35
HIF3A-202ENST00000244303 MTMR6Q9Y217 621 aa17.21■□□□□ 0.35
HIF3A-202ENST00000244303 ATP6V1DQ9Y5K8 247 aa17.21■□□□□ 0.35
HIF3A-202ENST00000244303 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.35
HIF3A-202ENST00000244303 STRCQ7RTU9 1775 aa17.21■□□□□ 0.34
HIF3A-202ENST00000244303 ARFGEF2Q9Y6D5 1785 aa17.21■□□□□ 0.34
HIF3A-202ENST00000244303 SLC27A2O14975 620 aa17.21■□□□□ 0.34
HIF3A-202ENST00000244303 CABP4P57796 275 aa17.21■□□□□ 0.34
HIF3A-202ENST00000244303 UBE2HP62256 183 aa17.21■□□□□ 0.34
HIF3A-202ENST00000244303 COL9A3Q14050 684 aaPredicted RBP17.21■□□□□ 0.34
HIF3A-202ENST00000244303 ZNF335Q9H4Z2 1342 aaPredicted RBP17.2■□□□□ 0.34
HIF3A-202ENST00000244303 OFD1O75665 1012 aa17.2■□□□□ 0.34
HIF3A-202ENST00000244303 PIP4K2AP48426 406 aaPredicted RBP17.2■□□□□ 0.34
HIF3A-202ENST00000244303 NECAB1Q8N987 351 aa17.2■□□□□ 0.34
HIF3A-202ENST00000244303 FMNL2Q96PY5 1086 aa17.2■□□□□ 0.34
HIF3A-202ENST00000244303 ZKSCAN5Q9Y2L8 839 aa17.2■□□□□ 0.34
HIF3A-202ENST00000244303 JARID2Q92833 1246 aaPredicted RBP17.19■□□□□ 0.34
HIF3A-202ENST00000244303 TPCN1Q9ULQ1 816 aa17.19■□□□□ 0.34
HIF3A-202ENST00000244303 WDR17Q8IZU2 1322 aa17.19■□□□□ 0.34
HIF3A-202ENST00000244303 MED23Q9ULK4 1368 aa17.19■□□□□ 0.34
HIF3A-202ENST00000244303 KDM4FA0A1W2PPD8 638 aa17.19■□□□□ 0.34
HIF3A-202ENST00000244303 ZNF500O60304 480 aaPredicted RBP17.19■□□□□ 0.34
HIF3A-202ENST00000244303 ANKRD13DQ6ZTN6 518 aa17.19■□□□□ 0.34
HIF3A-202ENST00000244303 LRP10Q7Z4F1 713 aa17.19■□□□□ 0.34
HIF3A-202ENST00000244303 CCDC39Q9UFE4 941 aa17.19■□□□□ 0.34
HIF3A-202ENST00000244303 DNM1Q05193 864 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms