RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 ATP6V1AP38606 617 aa16.89■□□□□ 0.29
SNRNP27-201ENST00000244227 ITPK1Q13572 414 aa16.89■□□□□ 0.29
SNRNP27-201ENST00000244227 RTL5Q5HYW3 569 aaPredicted RBP16.89■□□□□ 0.29
SNRNP27-201ENST00000244227 EAF2Q96CJ1 260 aaPredicted RBP16.89■□□□□ 0.29
SNRNP27-201ENST00000244227 TTC41PQ6P2S7 1318 aa16.88■□□□□ 0.29
SNRNP27-201ENST00000244227 THSD7AQ9UPZ6 1657 aa16.88■□□□□ 0.29
SNRNP27-201ENST00000244227 EIF5P55010 431 aaKnown RBP16.88■□□□□ 0.29
SNRNP27-201ENST00000244227 CICQ96RK0 1608 aaPredicted RBP16.88■□□□□ 0.29
SNRNP27-201ENST00000244227 EIF5BO60841 1220 aaKnown RBP16.87■□□□□ 0.29
SNRNP27-201ENST00000244227 ANP32EQ9BTT0 268 aa16.87■□□□□ 0.29
SNRNP27-201ENST00000244227 USP26Q9BXU7 913 aa16.87■□□□□ 0.29
SNRNP27-201ENST00000244227 TRIM6-TRIM34B2RNG4 842 aa16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 ERVV-1B6SEH8 477 aa16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 PCCAP05165 728 aaPredicted RBP16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 CHMLP26374 656 aa16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 CASC1Q6TDU7 716 aa16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 AACSQ86V21 672 aa16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 SMARCC1Q92922 1105 aaPredicted RBP16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 RILPL2Q969X0 211 aa16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 TBC1D2Q9BYX2 928 aa16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 CRKLP46109 303 aaKnown RBP16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 ARXQ96QS3 562 aa16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 CCDC87Q9NVE4 849 aa16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 DAXXQ9UER7 740 aaPredicted RBP16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 RREB1Q92766 1687 aa16.86■□□□□ 0.29
SNRNP27-201ENST00000244227 IFIT2P09913 472 aaKnown RBP16.85■□□□□ 0.29
SNRNP27-201ENST00000244227 BECN1Q14457 450 aa16.85■□□□□ 0.29
SNRNP27-201ENST00000244227 HSP90AB3PQ58FF7 597 aa16.85■□□□□ 0.29
SNRNP27-201ENST00000244227 PTF1AQ7RTS3 328 aa16.85■□□□□ 0.29
SNRNP27-201ENST00000244227 NLRP10Q86W26 655 aa16.85■□□□□ 0.29
SNRNP27-201ENST00000244227 DZIP3Q86Y13 1208 aaKnown RBP16.85■□□□□ 0.29
SNRNP27-201ENST00000244227 ZBTB38Q8NAP3 1195 aaPredicted RBP16.85■□□□□ 0.29
SNRNP27-201ENST00000244227 ECHDC1Q9NTX5 307 aa16.85■□□□□ 0.29
SNRNP27-201ENST00000244227 TBC1D2BQ9UPU7 963 aa16.85■□□□□ 0.29
SNRNP27-201ENST00000244227 AFF2P51816 1311 aa16.85■□□□□ 0.29
SNRNP27-201ENST00000244227 ERC2O15083 957 aa16.84■□□□□ 0.29
SNRNP27-201ENST00000244227 GLRX3O76003 335 aaKnown RBP16.84■□□□□ 0.29
SNRNP27-201ENST00000244227 GJD4Q96KN9 370 aaPredicted RBP16.84■□□□□ 0.29
SNRNP27-201ENST00000244227 PLA2G12BQ9BX93 195 aa16.84■□□□□ 0.29
SNRNP27-201ENST00000244227 CCDC8Q9H0W5 538 aaPredicted RBP16.84■□□□□ 0.29
SNRNP27-201ENST00000244227 TLR7Q9NYK1 1049 aaKnown RBP16.84■□□□□ 0.29
SNRNP27-201ENST00000244227 MAP4K4O95819 1239 aaPredicted RBP16.84■□□□□ 0.29
SNRNP27-201ENST00000244227 MEX3CQ5U5Q3 659 aaKnown RBP16.84■□□□□ 0.29
SNRNP27-201ENST00000244227 FAM89AQ96GI7 184 aa16.84■□□□□ 0.29
SNRNP27-201ENST00000244227 ESYT1Q9BSJ8 1104 aa16.84■□□□□ 0.29
SNRNP27-201ENST00000244227 ONECUT3O60422 494 aaPredicted RBP16.83■□□□□ 0.28
SNRNP27-201ENST00000244227 GPTP24298 496 aa16.83■□□□□ 0.28
SNRNP27-201ENST00000244227 TFCP2Q12800 502 aa16.83■□□□□ 0.28
SNRNP27-201ENST00000244227 ZNF34Q8IZ26 560 aa16.83■□□□□ 0.28
SNRNP27-201ENST00000244227 MYT1Q01538 1121 aa16.82■□□□□ 0.28
SNRNP27-201ENST00000244227 ATG9AQ7Z3C6 839 aa16.82■□□□□ 0.28
SNRNP27-201ENST00000244227 SYNE4Q8N205 404 aa16.82■□□□□ 0.28
SNRNP27-201ENST00000244227 CHMP3Q9Y3E7 222 aa16.82■□□□□ 0.28
SNRNP27-201ENST00000244227 ATRNO75882 1429 aa16.82■□□□□ 0.28
SNRNP27-201ENST00000244227 CDHR2Q9BYE9 1310 aa16.82■□□□□ 0.28
SNRNP27-201ENST00000244227 MYH14Q7Z406 1995 aaKnown RBP16.82■□□□□ 0.28
SNRNP27-201ENST00000244227 REC8O95072 547 aa16.82■□□□□ 0.28
SNRNP27-201ENST00000244227 CSF1RP07333 972 aa16.82■□□□□ 0.28
SNRNP27-201ENST00000244227 ZNF831Q5JPB2 1677 aa16.82■□□□□ 0.28
SNRNP27-201ENST00000244227 ANKRD36CQ5JPF3 1778 aa16.81■□□□□ 0.28
SNRNP27-201ENST00000244227 NUP98P52948 1817 aa16.81■□□□□ 0.28
SNRNP27-201ENST00000244227 TNNI3KQ59H18 835 aa16.81■□□□□ 0.28
SNRNP27-201ENST00000244227 CNTROBQ8N137 903 aa16.81■□□□□ 0.28
SNRNP27-201ENST00000244227 FPGT-TNNI3KV9GXZ4 949 aa16.81■□□□□ 0.28
SNRNP27-201ENST00000244227 UBN2Q6ZU65 1347 aa16.81■□□□□ 0.28
SNRNP27-201ENST00000244227 CAMTA2O94983 1202 aa16.8■□□□□ 0.28
SNRNP27-201ENST00000244227 LINC00116Q8NCU8 138 aa16.8■□□□□ 0.28
SNRNP27-201ENST00000244227 SNX21Q969T3 373 aa16.8■□□□□ 0.28
SNRNP27-201ENST00000244227 GPATCH3Q96I76 525 aa16.8■□□□□ 0.28
SNRNP27-201ENST00000244227 ZNF594Q96JF6 807 aaPredicted RBP16.8■□□□□ 0.28
SNRNP27-201ENST00000244227 IL25Q9H293 177 aa16.8■□□□□ 0.28
SNRNP27-201ENST00000244227 COL5A3P25940 1745 aaPredicted RBP16.8■□□□□ 0.28
SNRNP27-201ENST00000244227 FAM182BQ5T319 152 aa16.8■□□□□ 0.28
SNRNP27-201ENST00000244227 DBNLQ9UJU6 430 aaKnown RBP16.8■□□□□ 0.28
SNRNP27-201ENST00000244227 EYA2O00167 538 aa16.79■□□□□ 0.28
SNRNP27-201ENST00000244227 LRRC24Q50LG9 513 aa16.79■□□□□ 0.28
SNRNP27-201ENST00000244227 CIAO1O76071 339 aa16.78■□□□□ 0.28
SNRNP27-201ENST00000244227 IL15P40933 162 aaPredicted RBP16.78■□□□□ 0.28
SNRNP27-201ENST00000244227 TRPC5Q9UL62 973 aaPredicted RBP16.78■□□□□ 0.28
SNRNP27-201ENST00000244227 KCNQ4P56696 695 aa16.77■□□□□ 0.28
SNRNP27-201ENST00000244227 PUS3Q9BZE2 481 aaKnown RBP16.77■□□□□ 0.28
SNRNP27-201ENST00000244227 TRMT112Q9UI30 125 aaKnown RBP16.77■□□□□ 0.28
SNRNP27-201ENST00000244227 NHSQ6T4R5 1651 aa16.77■□□□□ 0.28
SNRNP27-201ENST00000244227 TTLL11Q8NHH1 800 aa16.77■□□□□ 0.27
SNRNP27-201ENST00000244227 EVI5LQ96CN4 794 aa16.77■□□□□ 0.27
SNRNP27-201ENST00000244227 GPR108Q9NPR9 543 aa16.77■□□□□ 0.27
SNRNP27-201ENST00000244227 IRS4O14654 1257 aaPredicted RBP16.76■□□□□ 0.27
SNRNP27-201ENST00000244227 CD2BP2O95400 341 aaKnown RBP16.76■□□□□ 0.27
SNRNP27-201ENST00000244227 CCDC57Q2TAC2 916 aa16.76■□□□□ 0.27
SNRNP27-201ENST00000244227 SUSD4Q5VX71 490 aa16.76■□□□□ 0.27
SNRNP27-201ENST00000244227 SEPT12Q8IYM1 358 aa16.76■□□□□ 0.27
SNRNP27-201ENST00000244227 DBNDD2Q9BQY9 259 aa16.76■□□□□ 0.27
SNRNP27-201ENST00000244227 AK9Q5TCS8 1911 aa16.76■□□□□ 0.27
SNRNP27-201ENST00000244227 SGSM2O43147 1006 aa16.75■□□□□ 0.27
SNRNP27-201ENST00000244227 ATP5JP18859 108 aa16.75■□□□□ 0.27
SNRNP27-201ENST00000244227 CCDC85AQ96PX6 553 aaPredicted RBP16.75■□□□□ 0.27
SNRNP27-201ENST00000244227 BOLA2Q9H3K6 86 aa16.75■□□□□ 0.27
SNRNP27-201ENST00000244227 ANTXR1Q9H6X2 564 aa16.75■□□□□ 0.27
SNRNP27-201ENST00000244227 FBXO3Q9UK99 471 aa16.75■□□□□ 0.27
SNRNP27-201ENST00000244227 BTAF1O14981 1849 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms