RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 NLRP10Q86W26 655 aa18.78■□□□□ 0.6
HDHD3-201ENST00000238379 PCCAP05165 728 aaPredicted RBP18.77■□□□□ 0.6
HDHD3-201ENST00000238379 ZNF772Q68DY9 489 aaPredicted RBP18.77■□□□□ 0.6
HDHD3-201ENST00000238379 MX1P20591 662 aa18.77■□□□□ 0.59
HDHD3-201ENST00000238379 GPTP24298 496 aa18.77■□□□□ 0.59
HDHD3-201ENST00000238379 OS9Q13438 667 aaPredicted RBP18.77■□□□□ 0.59
HDHD3-201ENST00000238379 LMBR1LQ6UX01 489 aa18.77■□□□□ 0.59
HDHD3-201ENST00000238379 ERC1Q8IUD2 1116 aa18.77■□□□□ 0.59
HDHD3-201ENST00000238379 COPRSQ9NQ92 184 aa18.77■□□□□ 0.59
HDHD3-201ENST00000238379 STAP2Q9UGK3 403 aa18.77■□□□□ 0.59
HDHD3-201ENST00000238379 CNTNAP4Q9C0A0 1308 aa18.76■□□□□ 0.59
HDHD3-201ENST00000238379 NUP98P52948 1817 aa18.76■□□□□ 0.59
HDHD3-201ENST00000238379 ZBTB38Q8NAP3 1195 aaPredicted RBP18.76■□□□□ 0.59
HDHD3-201ENST00000238379 BCL11BQ9C0K0 894 aaPredicted RBP18.76■□□□□ 0.59
HDHD3-201ENST00000238379 ANKRD36CQ5JPF3 1778 aa18.75■□□□□ 0.59
HDHD3-201ENST00000238379 CAMTA2O94983 1202 aa18.75■□□□□ 0.59
HDHD3-201ENST00000238379 PTPN12Q05209 780 aaKnown RBP18.75■□□□□ 0.59
HDHD3-201ENST00000238379 KRT27Q7Z3Y8 459 aa18.75■□□□□ 0.59
HDHD3-201ENST00000238379 ZNF34Q8IZ26 560 aa18.75■□□□□ 0.59
HDHD3-201ENST00000238379 KLHDC4Q8TBB5 520 aa18.75■□□□□ 0.59
HDHD3-201ENST00000238379 SASH1O94885 1247 aa18.74■□□□□ 0.59
HDHD3-201ENST00000238379 ANP32AP39687 249 aaKnown RBP18.74■□□□□ 0.59
HDHD3-201ENST00000238379 RBM6P78332 1123 aaKnown RBP18.74■□□□□ 0.59
HDHD3-201ENST00000238379 G3BP1Q13283 466 aaKnown RBP eCLIP18.74■□□□□ 0.59
HDHD3-201ENST00000238379 RC3H1Q5TC82 1133 aaKnown RBP18.74■□□□□ 0.59
HDHD3-201ENST00000238379 FAM89AQ96GI7 184 aa18.74■□□□□ 0.59
HDHD3-201ENST00000238379 BRWD3Q6RI45 1802 aa18.74■□□□□ 0.59
HDHD3-201ENST00000238379 FAM196AQ6ZSG2 479 aa18.74■□□□□ 0.59
HDHD3-201ENST00000238379 NUTM1Q86Y26 1132 aa18.74■□□□□ 0.59
HDHD3-201ENST00000238379 PLA2G12BQ9BX93 195 aa18.74■□□□□ 0.59
HDHD3-201ENST00000238379 CCNL1Q9UK58 526 aaPredicted RBP18.74■□□□□ 0.59
HDHD3-201ENST00000238379 SDSP20132 328 aa18.73■□□□□ 0.59
HDHD3-201ENST00000238379 SIL1Q9H173 461 aa18.73■□□□□ 0.59
HDHD3-201ENST00000238379 UBN2Q6ZU65 1347 aa18.73■□□□□ 0.59
HDHD3-201ENST00000238379 LY75O60449 1722 aa18.73■□□□□ 0.59
HDHD3-201ENST00000238379 TSHZ3Q63HK5 1081 aa18.72■□□□□ 0.59
HDHD3-201ENST00000238379 CLASRPQ8N2M8 674 aaKnown RBP18.72■□□□□ 0.59
HDHD3-201ENST00000238379 AOX1Q06278 1338 aa18.72■□□□□ 0.59
HDHD3-201ENST00000238379 CDHR2Q9BYE9 1310 aa18.72■□□□□ 0.59
HDHD3-201ENST00000238379 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.72■□□□□ 0.59
HDHD3-201ENST00000238379 CDC45O75419 566 aa18.71■□□□□ 0.59
HDHD3-201ENST00000238379 TBC1D9Q6ZT07 1266 aa18.71■□□□□ 0.59
HDHD3-201ENST00000238379 SYNE4Q8N205 404 aa18.71■□□□□ 0.59
HDHD3-201ENST00000238379 USP42Q9H9J4 1324 aaKnown RBP18.7■□□□□ 0.58
HDHD3-201ENST00000238379 RPS6KA4O75676 772 aa18.7■□□□□ 0.58
HDHD3-201ENST00000238379 TRMT112Q9UI30 125 aaKnown RBP18.7■□□□□ 0.58
HDHD3-201ENST00000238379 CHMP3Q9Y3E7 222 aa18.7■□□□□ 0.58
HDHD3-201ENST00000238379 CSF1RP07333 972 aa18.7■□□□□ 0.58
HDHD3-201ENST00000238379 UPF2Q9HAU5 1272 aaKnown RBP18.69■□□□□ 0.58
HDHD3-201ENST00000238379 SUSD4Q5VX71 490 aa18.68■□□□□ 0.58
HDHD3-201ENST00000238379 CLEC4GQ6UXB4 293 aa18.68■□□□□ 0.58
HDHD3-201ENST00000238379 PI4K2BQ8TCG2 481 aa18.68■□□□□ 0.58
HDHD3-201ENST00000238379 EAF2Q96CJ1 260 aaPredicted RBP18.68■□□□□ 0.58
HDHD3-201ENST00000238379 RGL2O15211 777 aa18.67■□□□□ 0.58
HDHD3-201ENST00000238379 MFAP1P55081 439 aaKnown RBP18.67■□□□□ 0.58
HDHD3-201ENST00000238379 PARP10Q53GL7 1025 aa18.67■□□□□ 0.58
HDHD3-201ENST00000238379 AACSQ86V21 672 aa18.67■□□□□ 0.58
HDHD3-201ENST00000238379 TBC1D32Q96NH3 1257 aa18.67■□□□□ 0.58
HDHD3-201ENST00000238379 TAF1LQ8IZX4 1826 aa18.67■□□□□ 0.58
HDHD3-201ENST00000238379 TUBGCP6Q96RT7 1819 aa18.67■□□□□ 0.58
HDHD3-201ENST00000238379 BCORQ6W2J9 1755 aa18.67■□□□□ 0.58
HDHD3-201ENST00000238379 IRS4O14654 1257 aaPredicted RBP18.67■□□□□ 0.58
HDHD3-201ENST00000238379 GNPATO15228 680 aa18.67■□□□□ 0.58
HDHD3-201ENST00000238379 SMIM5Q71RC9 77 aa18.67■□□□□ 0.58
HDHD3-201ENST00000238379 ATG9AQ7Z3C6 839 aa18.67■□□□□ 0.58
HDHD3-201ENST00000238379 ZNF652Q9Y2D9 606 aa18.67■□□□□ 0.58
HDHD3-201ENST00000238379 TTC41PQ6P2S7 1318 aa18.66■□□□□ 0.58
HDHD3-201ENST00000238379 TRIM37O94972 964 aa18.66■□□□□ 0.58
HDHD3-201ENST00000238379 IFIT2P09913 472 aaKnown RBP18.66■□□□□ 0.58
HDHD3-201ENST00000238379 IPO9Q96P70 1041 aaKnown RBP18.66■□□□□ 0.58
HDHD3-201ENST00000238379 LRRC4BQ9NT99 713 aa18.66■□□□□ 0.58
HDHD3-201ENST00000238379 NIP7Q9Y221 180 aaKnown RBP eCLIP18.66■□□□□ 0.58
HDHD3-201ENST00000238379 TFCP2Q12800 502 aa18.65■□□□□ 0.58
HDHD3-201ENST00000238379 CCDC57Q2TAC2 916 aa18.65■□□□□ 0.58
HDHD3-201ENST00000238379 TTLL11Q8NHH1 800 aa18.65■□□□□ 0.58
HDHD3-201ENST00000238379 UTP14AQ9BVJ6 771 aaKnown RBP18.65■□□□□ 0.58
HDHD3-201ENST00000238379 RXRBP28702 533 aa18.65■□□□□ 0.58
HDHD3-201ENST00000238379 CTSWP56202 376 aa18.65■□□□□ 0.58
HDHD3-201ENST00000238379 ZNF594Q96JF6 807 aaPredicted RBP18.65■□□□□ 0.58
HDHD3-201ENST00000238379 ECHDC1Q9NTX5 307 aa18.65■□□□□ 0.58
HDHD3-201ENST00000238379 NARFQ9UHQ1 456 aa18.65■□□□□ 0.58
HDHD3-201ENST00000238379 RTCBQ9Y3I0 505 aaKnown RBP18.65■□□□□ 0.58
HDHD3-201ENST00000238379 SH3TC1Q8TE82 1336 aa18.64■□□□□ 0.57
HDHD3-201ENST00000238379 EYA2O00167 538 aa18.64■□□□□ 0.57
HDHD3-201ENST00000238379 PDE8AO60658 829 aa18.64■□□□□ 0.57
HDHD3-201ENST00000238379 CIAO1O76071 339 aa18.64■□□□□ 0.57
HDHD3-201ENST00000238379 AMIGO3Q86WK7 504 aa18.64■□□□□ 0.57
HDHD3-201ENST00000238379 AK7Q96M32 723 aa18.64■□□□□ 0.57
HDHD3-201ENST00000238379 BCL2L12Q9HB09 334 aa18.64■□□□□ 0.57
HDHD3-201ENST00000238379 EP400Q96L91 3159 aa18.64■□□□□ 0.57
HDHD3-201ENST00000238379 C4BP0C0L5 1744 aa18.64■□□□□ 0.57
HDHD3-201ENST00000238379 NTSR2O95665 410 aa18.63■□□□□ 0.57
HDHD3-201ENST00000238379 IL15P40933 162 aaPredicted RBP18.63■□□□□ 0.57
HDHD3-201ENST00000238379 FBXO41Q8TF61 875 aa18.63■□□□□ 0.57
HDHD3-201ENST00000238379 GPATCH3Q96I76 525 aa18.63■□□□□ 0.57
HDHD3-201ENST00000238379 CCDC8Q9H0W5 538 aaPredicted RBP18.63■□□□□ 0.57
HDHD3-201ENST00000238379 GLRX3O76003 335 aaKnown RBP18.63■□□□□ 0.57
HDHD3-201ENST00000238379 IFIT5Q13325 482 aaKnown RBP18.63■□□□□ 0.57
HDHD3-201ENST00000238379 LRRC24Q50LG9 513 aa18.63■□□□□ 0.57
HDHD3-201ENST00000238379 TNNI3KQ59H18 835 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms