RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 NLRP10Q86W26 655 aa23.11■■□□□ 1.29
SNX17-201ENST00000233575 BCORQ6W2J9 1755 aa23.11■■□□□ 1.29
SNX17-201ENST00000233575 RPS6KA4O75676 772 aa23.09■■□□□ 1.29
SNX17-201ENST00000233575 ZNF34Q8IZ26 560 aa23.09■■□□□ 1.29
SNX17-201ENST00000233575 SYNE4Q8N205 404 aa23.09■■□□□ 1.29
SNX17-201ENST00000233575 FAM89AQ96GI7 184 aa23.09■■□□□ 1.29
SNX17-201ENST00000233575 SURF6O75683 361 aaKnown RBP23.09■■□□□ 1.29
SNX17-201ENST00000233575 C16orf71Q8IYS4 520 aaPredicted RBP23.09■■□□□ 1.29
SNX17-201ENST00000233575 PROM2Q8N271 834 aa23.09■■□□□ 1.29
SNX17-201ENST00000233575 PA2G4Q9UQ80 394 aaKnown RBP23.09■■□□□ 1.29
SNX17-201ENST00000233575 FOXO4P98177 505 aa23.08■■□□□ 1.29
SNX17-201ENST00000233575 RABL6Q3YEC7 729 aaPredicted RBP23.08■■□□□ 1.28
SNX17-201ENST00000233575 OTUD7AQ8TE49 926 aaPredicted RBP23.07■■□□□ 1.28
SNX17-201ENST00000233575 PCCAP05165 728 aaPredicted RBP23.06■■□□□ 1.28
SNX17-201ENST00000233575 ZBTB38Q8NAP3 1195 aaPredicted RBP23.06■■□□□ 1.28
SNX17-201ENST00000233575 KLHDC4Q8TBB5 520 aa23.06■■□□□ 1.28
SNX17-201ENST00000233575 RTCBQ9Y3I0 505 aaKnown RBP23.06■■□□□ 1.28
SNX17-201ENST00000233575 SCN7AQ01118 1682 aa23.06■■□□□ 1.28
SNX17-201ENST00000233575 APBA3O96018 575 aa23.06■■□□□ 1.28
SNX17-201ENST00000233575 TXNRD1Q16881 649 aa23.06■■□□□ 1.28
SNX17-201ENST00000233575 LMBR1LQ6UX01 489 aa23.06■■□□□ 1.28
SNX17-201ENST00000233575 SRP68Q9UHB9 627 aaKnown RBP23.06■■□□□ 1.28
SNX17-201ENST00000233575 SLC27A3Q5K4L6 730 aa23.05■■□□□ 1.28
SNX17-201ENST00000233575 TNS1Q9HBL0 1735 aaKnown RBP23.05■■□□□ 1.28
SNX17-201ENST00000233575 PHF14O94880 888 aa23.04■■□□□ 1.28
SNX17-201ENST00000233575 AK7Q96M32 723 aa23.04■■□□□ 1.28
SNX17-201ENST00000233575 LRRCC1Q9C099 1032 aa23.04■■□□□ 1.28
SNX17-201ENST00000233575 BCL2L12Q9HB09 334 aa23.04■■□□□ 1.28
SNX17-201ENST00000233575 C4AP0C0L4 1744 aa23.04■■□□□ 1.28
SNX17-201ENST00000233575 SUSD4Q5VX71 490 aa23.04■■□□□ 1.28
SNX17-201ENST00000233575 ARHGEF1Q92888 912 aaKnown RBP23.04■■□□□ 1.28
SNX17-201ENST00000233575 TRMT112Q9UI30 125 aaKnown RBP23.04■■□□□ 1.28
SNX17-201ENST00000233575 NOP58Q9Y2X3 529 aaKnown RBP23.04■■□□□ 1.28
SNX17-201ENST00000233575 FAM177BA6PVY3 158 aa23.03■■□□□ 1.28
SNX17-201ENST00000233575 RFX5P48382 616 aaPredicted RBP23.03■■□□□ 1.28
SNX17-201ENST00000233575 USPL1Q5W0Q7 1092 aa23.03■■□□□ 1.28
SNX17-201ENST00000233575 ZBTB47Q9UFB7 747 aaPredicted RBP23.03■■□□□ 1.28
SNX17-201ENST00000233575 NIP7Q9Y221 180 aaKnown RBP eCLIP23.03■■□□□ 1.28
SNX17-201ENST00000233575 UBR3Q6ZT12 1888 aa23.03■■□□□ 1.28
SNX17-201ENST00000233575 IL1RAPL2Q9NP60 686 aa23.03■■□□□ 1.28
SNX17-201ENST00000233575 NARFQ9UHQ1 456 aa23.03■■□□□ 1.28
SNX17-201ENST00000233575 CHMP3Q9Y3E7 222 aa23.02■■□□□ 1.28
SNX17-201ENST00000233575 PLSCR1O15162 318 aa23.01■■□□□ 1.27
SNX17-201ENST00000233575 PLEKHM2Q8IWE5 1019 aa23.01■■□□□ 1.27
SNX17-201ENST00000233575 SIL1Q9H173 461 aa23.01■■□□□ 1.27
SNX17-201ENST00000233575 CLEC4GQ6UXB4 293 aa23.01■■□□□ 1.27
SNX17-201ENST00000233575 RHPN1Q8TCX5 695 aa23.01■■□□□ 1.27
SNX17-201ENST00000233575 ZNF652Q9Y2D9 606 aa23.01■■□□□ 1.27
SNX17-201ENST00000233575 CDHR2Q9BYE9 1310 aa23■■□□□ 1.27
SNX17-201ENST00000233575 RAB11FIP3O75154 756 aa23■■□□□ 1.27
SNX17-201ENST00000233575 PTPN12Q05209 780 aaKnown RBP23■■□□□ 1.27
SNX17-201ENST00000233575 OS9Q13438 667 aaPredicted RBP22.99■■□□□ 1.27
SNX17-201ENST00000233575 C8orf34Q49A92 452 aa22.99■■□□□ 1.27
SNX17-201ENST00000233575 CCDC85AQ96PX6 553 aaPredicted RBP22.99■■□□□ 1.27
SNX17-201ENST00000233575 PLA2G12BQ9BX93 195 aa22.99■■□□□ 1.27
SNX17-201ENST00000233575 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.99■■□□□ 1.27
SNX17-201ENST00000233575 IRS4O14654 1257 aaPredicted RBP22.99■■□□□ 1.27
SNX17-201ENST00000233575 TRAPPC3LQ5T215 181 aa22.99■■□□□ 1.27
SNX17-201ENST00000233575 TBC1D9BQ66K14 1250 aa22.99■■□□□ 1.27
SNX17-201ENST00000233575 BICDL1Q6ZP65 573 aa22.99■■□□□ 1.27
SNX17-201ENST00000233575 BACH2Q9BYV9 841 aa22.99■■□□□ 1.27
SNX17-201ENST00000233575 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.98■■□□□ 1.27
SNX17-201ENST00000233575 ZPR1O75312 459 aa22.98■■□□□ 1.27
SNX17-201ENST00000233575 KIF1BPQ96EK5 621 aa22.98■■□□□ 1.27
SNX17-201ENST00000233575 COPRSQ9NQ92 184 aa22.98■■□□□ 1.27
SNX17-201ENST00000233575 NTSR2O95665 410 aa22.98■■□□□ 1.27
SNX17-201ENST00000233575 PARP10Q53GL7 1025 aa22.98■■□□□ 1.27
SNX17-201ENST00000233575 UTP14AQ9BVJ6 771 aaKnown RBP22.98■■□□□ 1.27
SNX17-201ENST00000233575 SASH1O94885 1247 aa22.97■■□□□ 1.27
SNX17-201ENST00000233575 FAM161AQ3B820 660 aa22.97■■□□□ 1.27
SNX17-201ENST00000233575 HSP90AB4PQ58FF6 505 aa22.97■■□□□ 1.27
SNX17-201ENST00000233575 USP42Q9H9J4 1324 aaKnown RBP22.97■■□□□ 1.27
SNX17-201ENST00000233575 RFC4P35249 363 aa22.96■■□□□ 1.27
SNX17-201ENST00000233575 NUTM1Q86Y26 1132 aa22.96■■□□□ 1.27
SNX17-201ENST00000233575 SH3TC1Q8TE82 1336 aa22.96■■□□□ 1.27
SNX17-201ENST00000233575 MYH3P11055 1940 aa22.96■■□□□ 1.27
SNX17-201ENST00000233575 SALL3Q9BXA9 1300 aa22.96■■□□□ 1.27
SNX17-201ENST00000233575 G3BP1Q13283 466 aaKnown RBP eCLIP22.96■■□□□ 1.27
SNX17-201ENST00000233575 TSHZ3Q63HK5 1081 aa22.96■■□□□ 1.27
SNX17-201ENST00000233575 ZNF594Q96JF6 807 aaPredicted RBP22.96■■□□□ 1.27
SNX17-201ENST00000233575 CSF1RP07333 972 aa22.95■■□□□ 1.26
SNX17-201ENST00000233575 HCLS1P14317 486 aaPredicted RBP22.95■■□□□ 1.26
SNX17-201ENST00000233575 ZNF827Q17R98 1081 aa22.95■■□□□ 1.26
SNX17-201ENST00000233575 DDX60Q8IY21 1712 aaKnown RBP22.95■■□□□ 1.26
SNX17-201ENST00000233575 ILDR1Q86SU0 546 aaPredicted RBP22.94■■□□□ 1.26
SNX17-201ENST00000233575 TTLL11Q8NHH1 800 aa22.94■■□□□ 1.26
SNX17-201ENST00000233575 CTSWP56202 376 aa22.94■■□□□ 1.26
SNX17-201ENST00000233575 RGL2O15211 777 aa22.93■■□□□ 1.26
SNX17-201ENST00000233575 GSPT1P15170 499 aaKnown RBP22.93■■□□□ 1.26
SNX17-201ENST00000233575 PDE8AO60658 829 aa22.92■■□□□ 1.26
SNX17-201ENST00000233575 ADRA2BP18089 450 aa22.92■■□□□ 1.26
SNX17-201ENST00000233575 PDE1AP54750 535 aa22.92■■□□□ 1.26
SNX17-201ENST00000233575 ERC1Q8IUD2 1116 aa22.92■■□□□ 1.26
SNX17-201ENST00000233575 GREM2Q9H772 168 aa22.92■■□□□ 1.26
SNX17-201ENST00000233575 COL24A1Q17RW2 1714 aa22.92■■□□□ 1.26
SNX17-201ENST00000233575 SSFA2P28290 1259 aa22.91■■□□□ 1.26
SNX17-201ENST00000233575 CCDC57Q2TAC2 916 aa22.91■■□□□ 1.26
SNX17-201ENST00000233575 BMP2KLQ5H9B9 411 aa22.91■■□□□ 1.26
SNX17-201ENST00000233575 RBM19Q9Y4C8 960 aaKnown RBP22.91■■□□□ 1.26
SNX17-201ENST00000233575 RGPD3A6NKT7 1758 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms