RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 GLRX3O76003 335 aaKnown RBP18.59■□□□□ 0.57
PXN-201ENST00000228307 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
PXN-201ENST00000228307 KLHDC4Q8TBB5 520 aa18.59■□□□□ 0.57
PXN-201ENST00000228307 IGSF1Q8N6C5 1336 aa18.59■□□□□ 0.57
PXN-201ENST00000228307 BRPF1P55201 1214 aaPredicted RBP18.59■□□□□ 0.57
PXN-201ENST00000228307 ZSCAN31Q96LW9 406 aaPredicted RBP18.59■□□□□ 0.57
PXN-201ENST00000228307 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.59■□□□□ 0.57
PXN-201ENST00000228307 V9GYY5 206 aaPredicted RBP18.59■□□□□ 0.57
PXN-201ENST00000228307 U2AF2P26368 475 aaKnown RBP eCLIP18.59■□□□□ 0.57
PXN-201ENST00000228307 AMOTQ4VCS5 1084 aa18.59■□□□□ 0.57
PXN-201ENST00000228307 SMAP1Q8IYB5 467 aaPredicted RBP18.59■□□□□ 0.57
PXN-201ENST00000228307 CCDC8Q9H0W5 538 aaPredicted RBP18.59■□□□□ 0.57
PXN-201ENST00000228307 BOLA2Q9H3K6 86 aa18.59■□□□□ 0.57
PXN-201ENST00000228307 DACT1Q9NYF0 836 aa18.59■□□□□ 0.57
PXN-201ENST00000228307 NCOA3Q9Y6Q9 1424 aa18.59■□□□□ 0.57
PXN-201ENST00000228307 RIOK3O14730 519 aaKnown RBP18.58■□□□□ 0.57
PXN-201ENST00000228307 ZNF165P49910 485 aa18.58■□□□□ 0.57
PXN-201ENST00000228307 TAF7LQ5H9L4 462 aa18.58■□□□□ 0.57
PXN-201ENST00000228307 ERICH4A6NGS2 130 aa18.58■□□□□ 0.56
PXN-201ENST00000228307 RNMTO43148 476 aaKnown RBP18.58■□□□□ 0.56
PXN-201ENST00000228307 CLEC17AQ6ZS10 378 aa18.58■□□□□ 0.56
PXN-201ENST00000228307 COPS6Q7L5N1 327 aa18.58■□□□□ 0.56
PXN-201ENST00000228307 CLIP2Q9UDT6 1046 aa18.58■□□□□ 0.56
PXN-201ENST00000228307 KINO60870 393 aaKnown RBP18.58■□□□□ 0.56
PXN-201ENST00000228307 AKAP4Q5JQC9 854 aa18.58■□□□□ 0.56
PXN-201ENST00000228307 CHMP4AQ9BY43 222 aa18.58■□□□□ 0.56
PXN-201ENST00000228307 DNAJC2Q99543 621 aaKnown RBP18.57■□□□□ 0.56
PXN-201ENST00000228307 CGNQ9P2M7 1197 aaKnown RBP18.57■□□□□ 0.56
PXN-201ENST00000228307 ZNF335Q9H4Z2 1342 aaPredicted RBP18.57■□□□□ 0.56
PXN-201ENST00000228307 NPHP4O75161 1426 aaPredicted RBP18.57■□□□□ 0.56
PXN-201ENST00000228307 ANO6Q4KMQ2 910 aa18.57■□□□□ 0.56
PXN-201ENST00000228307 DBF4Q9UBU7 674 aaPredicted RBP18.57■□□□□ 0.56
PXN-201ENST00000228307 NPHP3Q7Z494 1330 aa18.57■□□□□ 0.56
PXN-201ENST00000228307 TPM4P67936 248 aa18.57■□□□□ 0.56
PXN-201ENST00000228307 MAP2P11137 1827 aaKnown RBP18.57■□□□□ 0.56
PXN-201ENST00000228307 CYP2E1P05181 493 aaPredicted RBP18.56■□□□□ 0.56
PXN-201ENST00000228307 BCL2L12Q9HB09 334 aa18.56■□□□□ 0.56
PXN-201ENST00000228307 IQSEC2Q5JU85 1478 aa18.56■□□□□ 0.56
PXN-201ENST00000228307 IFT172Q9UG01 1749 aa18.56■□□□□ 0.56
PXN-201ENST00000228307 CDK12Q9NYV4 1490 aaPredicted RBP18.56■□□□□ 0.56
PXN-201ENST00000228307 ARHGEF25Q86VW2 580 aa18.56■□□□□ 0.56
PXN-201ENST00000228307 XAGE3Q8WTP9 111 aa18.56■□□□□ 0.56
PXN-201ENST00000228307 SMC2O95347 1197 aa18.56■□□□□ 0.56
PXN-201ENST00000228307 FAM200AQ8TCP9 573 aa18.55■□□□□ 0.56
PXN-201ENST00000228307 ME1P48163 572 aa18.55■□□□□ 0.56
PXN-201ENST00000228307 PIK3R4Q99570 1358 aa18.55■□□□□ 0.56
PXN-201ENST00000228307 SH2B1Q9NRF2 756 aaPredicted RBP18.55■□□□□ 0.56
PXN-201ENST00000228307 SNX14Q9Y5W7 946 aa18.55■□□□□ 0.56
PXN-201ENST00000228307 UBE3BQ7Z3V4 1068 aa18.54■□□□□ 0.56
PXN-201ENST00000228307 IFNL2Q8IZJ0 200 aa18.54■□□□□ 0.56
PXN-201ENST00000228307 DNAJC25Q9H1X3 360 aa18.54■□□□□ 0.56
PXN-201ENST00000228307 EIF4A1P60842 406 aaKnown RBP18.54■□□□□ 0.56
PXN-201ENST00000228307 TYRO3Q06418 890 aa18.54■□□□□ 0.56
PXN-201ENST00000228307 SCAND2PQ9GZW5 306 aaPredicted RBP18.54■□□□□ 0.56
PXN-201ENST00000228307 DNAJC5Q9H3Z4 198 aa18.53■□□□□ 0.56
PXN-201ENST00000228307 GUCY1B3Q02153 619 aa18.53■□□□□ 0.56
PXN-201ENST00000228307 PTPN14Q15678 1187 aa18.53■□□□□ 0.56
PXN-201ENST00000228307 ZNF496Q96IT1 587 aaPredicted RBP18.53■□□□□ 0.56
PXN-201ENST00000228307 USP16Q9Y5T5 823 aa18.52■□□□□ 0.56
PXN-201ENST00000228307 FAM177A1Q8N128 213 aaPredicted RBP18.52■□□□□ 0.56
PXN-201ENST00000228307 PYCARDQ9ULZ3 195 aa18.52■□□□□ 0.56
PXN-201ENST00000228307 ECHDC1Q9NTX5 307 aa18.52■□□□□ 0.55
PXN-201ENST00000228307 SLAIN2Q9P270 581 aa18.52■□□□□ 0.55
PXN-201ENST00000228307 ARHGEF10O15013 1369 aa18.51■□□□□ 0.55
PXN-201ENST00000228307 TNNT3P45378 269 aaPredicted RBP18.51■□□□□ 0.55
PXN-201ENST00000228307 RASEFQ8IZ41 740 aa18.51■□□□□ 0.55
PXN-201ENST00000228307 NEURL4Q96JN8 1562 aa18.51■□□□□ 0.55
PXN-201ENST00000228307 GPTP24298 496 aa18.51■□□□□ 0.55
PXN-201ENST00000228307 LRMPQ12912 555 aa18.51■□□□□ 0.55
PXN-201ENST00000228307 HSPA4P34932 840 aa18.51■□□□□ 0.55
PXN-201ENST00000228307 CUL4AQ13619 759 aa18.51■□□□□ 0.55
PXN-201ENST00000228307 USP44Q9H0E7 712 aa18.51■□□□□ 0.55
PXN-201ENST00000228307 RBM8AQ9Y5S9 174 aaKnown RBP18.51■□□□□ 0.55
PXN-201ENST00000228307 PTCH1Q13635 1447 aa18.5■□□□□ 0.55
PXN-201ENST00000228307 SOS1Q07889 1333 aaPredicted RBP18.5■□□□□ 0.55
PXN-201ENST00000228307 ANKRD1Q15327 319 aa18.5■□□□□ 0.55
PXN-201ENST00000228307 TRERF1Q96PN7 1200 aa18.5■□□□□ 0.55
PXN-201ENST00000228307 LRRC2Q9BYS8 371 aa18.5■□□□□ 0.55
PXN-201ENST00000228307 SGSM2O43147 1006 aa18.5■□□□□ 0.55
PXN-201ENST00000228307 MNS1Q8NEH6 495 aa18.5■□□□□ 0.55
PXN-201ENST00000228307 NDUFB9Q9Y6M9 179 aa18.5■□□□□ 0.55
PXN-201ENST00000228307 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.5■□□□□ 0.55
PXN-201ENST00000228307 A0A087WZG4 1122 aa18.49■□□□□ 0.55
PXN-201ENST00000228307 ZNF790Q6PG37 636 aa18.49■□□□□ 0.55
PXN-201ENST00000228307 ACSBG1Q96GR2 724 aa18.49■□□□□ 0.55
PXN-201ENST00000228307 KIAA0232Q92628 1395 aa18.49■□□□□ 0.55
PXN-201ENST00000228307 COL3A1P02461 1466 aaPredicted RBP18.49■□□□□ 0.55
PXN-201ENST00000228307 CPLX1O14810 134 aa18.48■□□□□ 0.55
PXN-201ENST00000228307 CREBRFQ8IUR6 639 aa18.48■□□□□ 0.55
PXN-201ENST00000228307 OVOS2A0A0J9YW53 1432 aa18.48■□□□□ 0.55
PXN-201ENST00000228307 OVOS2Q6IE36 1432 aa18.48■□□□□ 0.55
PXN-201ENST00000228307 A1BGP04217 495 aa18.48■□□□□ 0.55
PXN-201ENST00000228307 ERC1Q8IUD2 1116 aa18.48■□□□□ 0.55
PXN-201ENST00000228307 HIP1O00291 1037 aa18.47■□□□□ 0.55
PXN-201ENST00000228307 RUFY3Q7L099 469 aa18.47■□□□□ 0.55
PXN-201ENST00000228307 DDX19AQ9NUU7 478 aaKnown RBP18.47■□□□□ 0.55
PXN-201ENST00000228307 BTG4Q9NY30 223 aa18.47■□□□□ 0.55
PXN-201ENST00000228307 CEP135Q66GS9 1140 aa18.47■□□□□ 0.55
PXN-201ENST00000228307 ZCRB1Q8TBF4 217 aaKnown RBP18.47■□□□□ 0.55
PXN-201ENST00000228307 NAT10Q9H0A0 1025 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms