RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 CACTINQ8WUQ7 758 aaKnown RBP12.21□□□□□ -0.45
FOXN1-201ENST00000226247 DLG5Q8TDM6 1919 aa12.21□□□□□ -0.45
FOXN1-201ENST00000226247 SOS1Q07889 1333 aaPredicted RBP12.21□□□□□ -0.45
FOXN1-201ENST00000226247 MYO5BQ9ULV0 1848 aa12.21□□□□□ -0.45
FOXN1-201ENST00000226247 CTIFO43310 598 aaKnown RBP12.21□□□□□ -0.45
FOXN1-201ENST00000226247 PI4K2BQ8TCG2 481 aa12.21□□□□□ -0.45
FOXN1-201ENST00000226247 MAP3K19Q56UN5 1328 aa12.21□□□□□ -0.46
FOXN1-201ENST00000226247 RAB11FIP3O75154 756 aa12.21□□□□□ -0.46
FOXN1-201ENST00000226247 CAPN2P17655 700 aa12.21□□□□□ -0.46
FOXN1-201ENST00000226247 C10orf67Q8IYJ2 551 aa12.21□□□□□ -0.46
FOXN1-201ENST00000226247 NEK11Q8NG66 645 aa12.21□□□□□ -0.46
FOXN1-201ENST00000226247 SECISBP2LQ93073 1101 aaKnown RBP12.21□□□□□ -0.46
FOXN1-201ENST00000226247 TPCN1Q9ULQ1 816 aa12.21□□□□□ -0.46
FOXN1-201ENST00000226247 CPSF1Q10570 1443 aaKnown RBP12.2□□□□□ -0.46
FOXN1-201ENST00000226247 ZKSCAN1P17029 563 aaPredicted RBP12.2□□□□□ -0.46
FOXN1-201ENST00000226247 SKIDA1Q1XH10 827 aa12.2□□□□□ -0.46
FOXN1-201ENST00000226247 CTNNA3Q9UI47 895 aa12.2□□□□□ -0.46
FOXN1-201ENST00000226247 AMPHP49418 695 aa12.2□□□□□ -0.46
FOXN1-201ENST00000226247 CCDC144BQ3MJ40 725 aa12.2□□□□□ -0.46
FOXN1-201ENST00000226247 CCDC144CPQ8IYA2 1237 aa12.2□□□□□ -0.46
FOXN1-201ENST00000226247 KRT222Q8N1A0 295 aa12.2□□□□□ -0.46
FOXN1-201ENST00000226247 FEZ1Q99689 392 aa12.2□□□□□ -0.46
FOXN1-201ENST00000226247 TBX22Q9Y458 520 aa12.2□□□□□ -0.46
FOXN1-201ENST00000226247 USP27XA6NNY8 438 aa12.2□□□□□ -0.46
FOXN1-201ENST00000226247 NR1I2O75469 434 aa12.2□□□□□ -0.46
FOXN1-201ENST00000226247 TERF2Q15554 542 aa12.2□□□□□ -0.46
FOXN1-201ENST00000226247 ELF2Q15723 593 aa12.2□□□□□ -0.46
FOXN1-201ENST00000226247 HDGFL1Q5TGJ6 251 aa12.2□□□□□ -0.46
FOXN1-201ENST00000226247 TMEM131LA2VDJ0 1609 aa12.19□□□□□ -0.46
FOXN1-201ENST00000226247 SMTNL1A8MU46 457 aa12.19□□□□□ -0.46
FOXN1-201ENST00000226247 ZNF75DP51815 510 aa12.19□□□□□ -0.46
FOXN1-201ENST00000226247 TAF7Q15545 349 aaPredicted RBP12.19□□□□□ -0.46
FOXN1-201ENST00000226247 CEP135Q66GS9 1140 aa12.19□□□□□ -0.46
FOXN1-201ENST00000226247 ERCC4Q92889 916 aaPredicted RBP12.19□□□□□ -0.46
FOXN1-201ENST00000226247 GOLGA6L19H0YKK7 550 aa12.19□□□□□ -0.46
FOXN1-201ENST00000226247 LARP1Q6PKG0 1096 aaKnown RBP12.19□□□□□ -0.46
FOXN1-201ENST00000226247 GPATCH11Q8N954 259 aa12.19□□□□□ -0.46
FOXN1-201ENST00000226247 PA2G4Q9UQ80 394 aaKnown RBP12.19□□□□□ -0.46
FOXN1-201ENST00000226247 EDC4Q6P2E9 1401 aaKnown RBP12.19□□□□□ -0.46
FOXN1-201ENST00000226247 NUTM2BA6NNL0 878 aaPredicted RBP12.18□□□□□ -0.46
FOXN1-201ENST00000226247 NUTM2EB1AL46 878 aaPredicted RBP12.18□□□□□ -0.46
FOXN1-201ENST00000226247 ST3GAL1Q11201 340 aa12.18□□□□□ -0.46
FOXN1-201ENST00000226247 NUTM2AQ8IVF1 878 aaPredicted RBP12.18□□□□□ -0.46
FOXN1-201ENST00000226247 KIF1BPQ96EK5 621 aa12.18□□□□□ -0.46
FOXN1-201ENST00000226247 RSPH14Q9UHP6 348 aa12.18□□□□□ -0.46
FOXN1-201ENST00000226247 ZNF215Q9UL58 517 aaPredicted RBP12.18□□□□□ -0.46
FOXN1-201ENST00000226247 USP16Q9Y5T5 823 aa12.18□□□□□ -0.46
FOXN1-201ENST00000226247 FAM227BQ96M60 508 aa12.18□□□□□ -0.46
FOXN1-201ENST00000226247 TAOK2Q9UL54 1235 aa12.18□□□□□ -0.46
FOXN1-201ENST00000226247 C3P01024 1663 aa12.18□□□□□ -0.46
FOXN1-201ENST00000226247 SPATA31D1Q6ZQQ2 1576 aa12.18□□□□□ -0.46
FOXN1-201ENST00000226247 SSH2Q76I76 1423 aa12.18□□□□□ -0.46
FOXN1-201ENST00000226247 A0A0G2JS52 829 aa12.18□□□□□ -0.46
FOXN1-201ENST00000226247 APPP05067 770 aa12.18□□□□□ -0.46
FOXN1-201ENST00000226247 SSH3Q8TE77 659 aa12.18□□□□□ -0.46
FOXN1-201ENST00000226247 RUFY2Q8WXA3 655 aa12.18□□□□□ -0.46
FOXN1-201ENST00000226247 CDK12Q9NYV4 1490 aaPredicted RBP12.18□□□□□ -0.46
FOXN1-201ENST00000226247 UBAP1LF5GYI3 381 aa12.17□□□□□ -0.46
FOXN1-201ENST00000226247 HNRNPH2P55795 449 aaKnown RBP12.17□□□□□ -0.46
FOXN1-201ENST00000226247 VPS53Q5VIR6 699 aa12.17□□□□□ -0.46
FOXN1-201ENST00000226247 CALCOCO1Q9P1Z2 691 aa12.17□□□□□ -0.46
FOXN1-201ENST00000226247 RBM8AQ9Y5S9 174 aaKnown RBP12.17□□□□□ -0.46
FOXN1-201ENST00000226247 IFIT2P09913 472 aaKnown RBP12.17□□□□□ -0.46
FOXN1-201ENST00000226247 GYS2P54840 703 aa12.17□□□□□ -0.46
FOXN1-201ENST00000226247 CLASRPQ8N2M8 674 aaKnown RBP12.17□□□□□ -0.46
FOXN1-201ENST00000226247 ZSCAN31Q96LW9 406 aaPredicted RBP12.17□□□□□ -0.46
FOXN1-201ENST00000226247 TMEM94Q12767 1356 aa12.17□□□□□ -0.46
FOXN1-201ENST00000226247 CPS1P31327 1500 aa12.17□□□□□ -0.46
FOXN1-201ENST00000226247 BECN2A8MW95 431 aa12.17□□□□□ -0.46
FOXN1-201ENST00000226247 ZC3H6P61129 1189 aaKnown RBP12.17□□□□□ -0.46
FOXN1-201ENST00000226247 GABPB1Q06547 395 aaPredicted RBP12.17□□□□□ -0.46
FOXN1-201ENST00000226247 PTPN14Q15678 1187 aa12.17□□□□□ -0.46
FOXN1-201ENST00000226247 NOL10Q9BSC4 688 aaKnown RBP12.17□□□□□ -0.46
FOXN1-201ENST00000226247 TAF6LQ9Y6J9 622 aa12.17□□□□□ -0.46
FOXN1-201ENST00000226247 PI4KAP2A4QPH2 592 aa12.16□□□□□ -0.46
FOXN1-201ENST00000226247 SKILP12757 684 aa12.16□□□□□ -0.46
FOXN1-201ENST00000226247 PI4KAP1Q8N8J0 262 aa12.16□□□□□ -0.46
FOXN1-201ENST00000226247 KIF18AQ8NI77 898 aa12.16□□□□□ -0.46
FOXN1-201ENST00000226247 EYA1Q99502 592 aa12.16□□□□□ -0.46
FOXN1-201ENST00000226247 CCDC8Q9H0W5 538 aaPredicted RBP12.16□□□□□ -0.46
FOXN1-201ENST00000226247 SH2B1Q9NRF2 756 aaPredicted RBP12.16□□□□□ -0.46
FOXN1-201ENST00000226247 ACEP12821 1306 aa12.16□□□□□ -0.46
FOXN1-201ENST00000226247 TTC21BQ7Z4L5 1316 aa12.16□□□□□ -0.46
FOXN1-201ENST00000226247 AATKQ6ZMQ8 1374 aa12.16□□□□□ -0.46
FOXN1-201ENST00000226247 NLRP6P59044 892 aa12.16□□□□□ -0.46
FOXN1-201ENST00000226247 ABTB2Q8N961 1025 aa12.16□□□□□ -0.46
FOXN1-201ENST00000226247 DDX41Q9UJV9 622 aaKnown RBP12.16□□□□□ -0.46
FOXN1-201ENST00000226247 SETD1BQ9UPS6 1966 aaKnown RBP12.16□□□□□ -0.46
FOXN1-201ENST00000226247 NPHP4O75161 1426 aaPredicted RBP12.16□□□□□ -0.46
FOXN1-201ENST00000226247 CRB1P82279 1406 aa12.16□□□□□ -0.46
FOXN1-201ENST00000226247 CDC42BPGQ6DT37 1551 aa12.16□□□□□ -0.46
FOXN1-201ENST00000226247 GOLGB1Q14789 3259 aaKnown RBP12.16□□□□□ -0.46
FOXN1-201ENST00000226247 H3BQV1 296 aa12.15□□□□□ -0.46
FOXN1-201ENST00000226247 JAK2O60674 1132 aa12.15□□□□□ -0.46
FOXN1-201ENST00000226247 GLRX3O76003 335 aaKnown RBP12.15□□□□□ -0.46
FOXN1-201ENST00000226247 KMT5BQ4FZB7 885 aa12.15□□□□□ -0.46
FOXN1-201ENST00000226247 IFFO2Q5TF58 517 aa12.15□□□□□ -0.46
FOXN1-201ENST00000226247 CREB3L3Q68CJ9 461 aa12.15□□□□□ -0.46
FOXN1-201ENST00000226247 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.46
FOXN1-201ENST00000226247 LEO1Q8WVC0 666 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms