RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 PDIA4P13667 645 aaKnown RBP26.4■■□□□ 1.82
SMARCD2-201ENST00000225742 PDRG1Q9NUG6 133 aa26.4■■□□□ 1.82
SMARCD2-201ENST00000225742 RBM27Q9P2N5 1060 aaKnown RBP26.4■■□□□ 1.82
SMARCD2-201ENST00000225742 ERBB4Q15303 1308 aa26.4■■□□□ 1.82
SMARCD2-201ENST00000225742 MAP4K1Q92918 833 aa26.39■■□□□ 1.82
SMARCD2-201ENST00000225742 AFDNP55196 1824 aaKnown RBP26.39■■□□□ 1.82
SMARCD2-201ENST00000225742 CYP27B1O15528 508 aa26.39■■□□□ 1.81
SMARCD2-201ENST00000225742 PRIM1P49642 420 aaKnown RBP26.39■■□□□ 1.81
SMARCD2-201ENST00000225742 HS1BP3Q53T59 392 aa26.39■■□□□ 1.81
SMARCD2-201ENST00000225742 PRPF40BQ6NWY9 871 aaKnown RBP26.39■■□□□ 1.81
SMARCD2-201ENST00000225742 RBSNQ9H1K0 784 aa26.39■■□□□ 1.81
SMARCD2-201ENST00000225742 SMC3Q9UQE7 1217 aa26.39■■□□□ 1.81
SMARCD2-201ENST00000225742 ATP6V1DQ9Y5K8 247 aa26.39■■□□□ 1.81
SMARCD2-201ENST00000225742 SPATA31A3Q5VYP0 1347 aa26.39■■□□□ 1.81
SMARCD2-201ENST00000225742 ZSCAN22P10073 491 aaPredicted RBP26.38■■□□□ 1.81
SMARCD2-201ENST00000225742 PSMA5P28066 241 aa26.38■■□□□ 1.81
SMARCD2-201ENST00000225742 KLHL34Q8N239 644 aa26.38■■□□□ 1.81
SMARCD2-201ENST00000225742 JAKMIP1Q96N16 626 aaKnown RBP26.38■■□□□ 1.81
SMARCD2-201ENST00000225742 CCDC8Q9H0W5 538 aaPredicted RBP26.38■■□□□ 1.81
SMARCD2-201ENST00000225742 ARFGEF2Q9Y6D5 1785 aa26.38■■□□□ 1.81
SMARCD2-201ENST00000225742 PHF14O94880 888 aa26.37■■□□□ 1.81
SMARCD2-201ENST00000225742 NMIQ13287 307 aaPredicted RBP26.37■■□□□ 1.81
SMARCD2-201ENST00000225742 RABL6Q3YEC7 729 aaPredicted RBP26.37■■□□□ 1.81
SMARCD2-201ENST00000225742 RFX7Q2KHR2 1363 aa26.37■■□□□ 1.81
SMARCD2-201ENST00000225742 CABP4P57796 275 aa26.37■■□□□ 1.81
SMARCD2-201ENST00000225742 RBM8AQ9Y5S9 174 aaKnown RBP26.37■■□□□ 1.81
SMARCD2-201ENST00000225742 STX6O43752 255 aa26.36■■□□□ 1.81
SMARCD2-201ENST00000225742 RNF20Q5VTR2 975 aa26.36■■□□□ 1.81
SMARCD2-201ENST00000225742 CREB3L3Q68CJ9 461 aa26.36■■□□□ 1.81
SMARCD2-201ENST00000225742 CHAMP1Q96JM3 812 aa26.36■■□□□ 1.81
SMARCD2-201ENST00000225742 ALDH8A1Q9H2A2 487 aaPredicted RBP26.36■■□□□ 1.81
SMARCD2-201ENST00000225742 USP16Q9Y5T5 823 aa26.36■■□□□ 1.81
SMARCD2-201ENST00000225742 NSFL1CQ9UNZ2 370 aaKnown RBP26.35■■□□□ 1.81
SMARCD2-201ENST00000225742 JCADQ9P266 1359 aa26.35■■□□□ 1.81
SMARCD2-201ENST00000225742 MED23Q9ULK4 1368 aa26.35■■□□□ 1.81
SMARCD2-201ENST00000225742 ATP5JP18859 108 aa26.35■■□□□ 1.81
SMARCD2-201ENST00000225742 RFX5P48382 616 aaPredicted RBP26.35■■□□□ 1.81
SMARCD2-201ENST00000225742 EPHA10Q5JZY3 1008 aa26.35■■□□□ 1.81
SMARCD2-201ENST00000225742 PLBD2Q8NHP8 589 aa26.35■■□□□ 1.81
SMARCD2-201ENST00000225742 FSD1Q9BTV5 496 aa26.35■■□□□ 1.81
SMARCD2-201ENST00000225742 USP48Q86UV5 1035 aa26.34■■□□□ 1.81
SMARCD2-201ENST00000225742 PDLIM2Q96JY6 352 aa26.34■■□□□ 1.81
SMARCD2-201ENST00000225742 SIL1Q9H173 461 aa26.34■■□□□ 1.81
SMARCD2-201ENST00000225742 GLI3P10071 1580 aa26.34■■□□□ 1.81
SMARCD2-201ENST00000225742 SYCE3A1L190 88 aa26.33■■□□□ 1.81
SMARCD2-201ENST00000225742 SYT1P21579 422 aa26.33■■□□□ 1.81
SMARCD2-201ENST00000225742 KCNJ4P48050 445 aa26.33■■□□□ 1.81
SMARCD2-201ENST00000225742 HMG20BQ9P0W2 317 aa26.33■■□□□ 1.81
SMARCD2-201ENST00000225742 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.33■■□□□ 1.81
SMARCD2-201ENST00000225742 ANKRD1Q15327 319 aa26.32■■□□□ 1.8
SMARCD2-201ENST00000225742 CSPP1Q1MSJ5 1256 aa26.32■■□□□ 1.8
SMARCD2-201ENST00000225742 ADCK5Q3MIX3 580 aa26.32■■□□□ 1.8
SMARCD2-201ENST00000225742 DDX17Q92841 729 aaKnown RBP26.32■■□□□ 1.8
SMARCD2-201ENST00000225742 FAM227BQ96M60 508 aa26.32■■□□□ 1.8
SMARCD2-201ENST00000225742 BOLA2Q9H3K6 86 aa26.32■■□□□ 1.8
SMARCD2-201ENST00000225742 TLR7Q9NYK1 1049 aaKnown RBP26.32■■□□□ 1.8
SMARCD2-201ENST00000225742 F13A1P00488 732 aa26.32■■□□□ 1.8
SMARCD2-201ENST00000225742 TSGA10IPQ3SY00 556 aa26.32■■□□□ 1.8
SMARCD2-201ENST00000225742 SLC27A2O14975 620 aa26.31■■□□□ 1.8
SMARCD2-201ENST00000225742 CHRNA2Q15822 529 aa26.31■■□□□ 1.8
SMARCD2-201ENST00000225742 TICAM2Q86XR7 235 aa26.31■■□□□ 1.8
SMARCD2-201ENST00000225742 PTPN12Q05209 780 aaKnown RBP26.3■■□□□ 1.8
SMARCD2-201ENST00000225742 TNNI3KQ59H18 835 aa26.3■■□□□ 1.8
SMARCD2-201ENST00000225742 ZSCAN30Q86W11 494 aa26.3■■□□□ 1.8
SMARCD2-201ENST00000225742 CABLES1Q8TDN4 633 aa26.3■■□□□ 1.8
SMARCD2-201ENST00000225742 TSPY26PQ9H489 355 aa26.3■■□□□ 1.8
SMARCD2-201ENST00000225742 FPGT-TNNI3KV9GXZ4 949 aa26.3■■□□□ 1.8
SMARCD2-201ENST00000225742 LETM1O95202 739 aaPredicted RBP26.3■■□□□ 1.8
SMARCD2-201ENST00000225742 A0A0D9SFI3 127 aa26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 CPA1P15085 419 aa26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 CASP7P55210 303 aa26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 KLHDC4Q8TBB5 520 aa26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 ANO8Q9HCE9 1232 aaPredicted RBP26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 PCDH11XQ9BZA7 1347 aa26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 PCDH11YQ9BZA8 1340 aa26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 UBR2Q8IWV8 1755 aa26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 A0A087WZG4 1122 aa26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 ERVV-2B6SEH9 535 aa26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 LARGE1O95461 756 aa26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 GJB2P29033 226 aa26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 UBE3BQ7Z3V4 1068 aa26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 CCDC83Q8IWF9 413 aa26.28■■□□□ 1.8
SMARCD2-201ENST00000225742 UBE2HP62256 183 aa26.27■■□□□ 1.8
SMARCD2-201ENST00000225742 KRT32Q14532 448 aa26.27■■□□□ 1.8
SMARCD2-201ENST00000225742 TCHHQ07283 1943 aa26.26■■□□□ 1.8
SMARCD2-201ENST00000225742 GADD45BO75293 160 aaPredicted RBP26.26■■□□□ 1.79
SMARCD2-201ENST00000225742 USPL1Q5W0Q7 1092 aa26.26■■□□□ 1.79
SMARCD2-201ENST00000225742 BLOC1S2Q6QNY1 142 aa26.26■■□□□ 1.79
SMARCD2-201ENST00000225742 H7C1W4 665 aa26.25■■□□□ 1.79
SMARCD2-201ENST00000225742 TFCP2Q12800 502 aa26.25■■□□□ 1.79
SMARCD2-201ENST00000225742 CCDC183Q5T5S1 534 aa26.25■■□□□ 1.79
SMARCD2-201ENST00000225742 DBNLQ9UJU6 430 aaKnown RBP26.25■■□□□ 1.79
SMARCD2-201ENST00000225742 WDR17Q8IZU2 1322 aa26.25■■□□□ 1.79
SMARCD2-201ENST00000225742 ME3Q16798 604 aa26.25■■□□□ 1.79
SMARCD2-201ENST00000225742 FAM184AQ8NB25 1140 aa26.25■■□□□ 1.79
SMARCD2-201ENST00000225742 MTMR6Q9Y217 621 aa26.25■■□□□ 1.79
SMARCD2-201ENST00000225742 CNPY2Q9Y2B0 182 aa26.25■■□□□ 1.79
SMARCD2-201ENST00000225742 NUP188Q5SRE5 1749 aa26.24■■□□□ 1.79
SMARCD2-201ENST00000225742 RPS6KB1P23443 525 aa26.24■■□□□ 1.79
SMARCD2-201ENST00000225742 ZCRB1Q8TBF4 217 aaKnown RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms