RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Irf9Q61179 399 aa17.83■□□□□ 0.45
Nup54-201ENSMUST00000038514 Ppp1r37Q8BKR5 712 aa17.83■□□□□ 0.45
Nup54-201ENSMUST00000038514 Atf7Q8R0S1 413 aa17.83■□□□□ 0.45
Nup54-201ENSMUST00000038514 Polr3dQ91WD1 398 aa17.83■□□□□ 0.45
Nup54-201ENSMUST00000038514 GckrQ91X44 587 aa17.83■□□□□ 0.45
Nup54-201ENSMUST00000038514 Ndufa8Q9DCJ5 172 aa17.83■□□□□ 0.45
Nup54-201ENSMUST00000038514 Ets1P27577 440 aa17.83■□□□□ 0.44
Nup54-201ENSMUST00000038514 Rab3gap1Q80UJ7 981 aa17.83■□□□□ 0.44
Nup54-201ENSMUST00000038514 Bag3Q9JLV1 577 aaKnown RBP17.83■□□□□ 0.44
Nup54-201ENSMUST00000038514 Psma5Q9Z2U1 241 aaKnown RBP17.83■□□□□ 0.44
Nup54-201ENSMUST00000038514 Cspp1B2RX88 1205 aa17.82■□□□□ 0.44
Nup54-201ENSMUST00000038514 Tpm3P21107 285 aaKnown RBP17.82■□□□□ 0.44
Nup54-201ENSMUST00000038514 Ppp6r1Q7TSI3 856 aa17.82■□□□□ 0.44
Nup54-201ENSMUST00000038514 Plcd3Q8K2J0 785 aa17.82■□□□□ 0.44
Nup54-201ENSMUST00000038514 Tceanc2Q8R2M0 207 aa17.82■□□□□ 0.44
Nup54-201ENSMUST00000038514 Tbc1d8Q9Z1A9 1134 aa17.82■□□□□ 0.44
Nup54-201ENSMUST00000038514 Grm8P47743 908 aa17.82■□□□□ 0.44
Nup54-201ENSMUST00000038514 Safb2Q80YR5 991 aaKnown RBP17.82■□□□□ 0.44
Nup54-201ENSMUST00000038514 Rps6kb1Q8BSK8 525 aa17.82■□□□□ 0.44
Nup54-201ENSMUST00000038514 Ccdc94Q9D6J3 314 aa17.82■□□□□ 0.44
Nup54-201ENSMUST00000038514 Tyro3P55144 880 aa17.81■□□□□ 0.44
Nup54-201ENSMUST00000038514 Cnnm3Q32NY4 713 aa17.81■□□□□ 0.44
Nup54-201ENSMUST00000038514 Tjp1P39447 1745 aaKnown RBP17.81■□□□□ 0.44
Nup54-201ENSMUST00000038514 AceP09470 1312 aa17.81■□□□□ 0.44
Nup54-201ENSMUST00000038514 Hmx1O70218 332 aa17.81■□□□□ 0.44
Nup54-201ENSMUST00000038514 Mdm2P23804 489 aa17.81■□□□□ 0.44
Nup54-201ENSMUST00000038514 Slc26a8Q8R0C3 999 aa17.81■□□□□ 0.44
Nup54-201ENSMUST00000038514 Irx4Q9QY61 515 aa17.81■□□□□ 0.44
Nup54-201ENSMUST00000038514 Nfe2l3Q9WTM4 660 aa17.81■□□□□ 0.44
Nup54-201ENSMUST00000038514 Serpina10Q8R121 448 aa17.8■□□□□ 0.44
Nup54-201ENSMUST00000038514 Cep57l1Q8VDS7 400 aa17.8■□□□□ 0.44
Nup54-201ENSMUST00000038514 Tmem2Q5FWI3 1383 aa17.8■□□□□ 0.44
Nup54-201ENSMUST00000038514 Col14a1Q80X19 1797 aa17.8■□□□□ 0.44
Nup54-201ENSMUST00000038514 RubcnlQ3TD16 648 aa17.8■□□□□ 0.44
Nup54-201ENSMUST00000038514 Lins1Q3U1D0 764 aa17.8■□□□□ 0.44
Nup54-201ENSMUST00000038514 Rimbp3Q3V0F0 1606 aa17.8■□□□□ 0.44
Nup54-201ENSMUST00000038514 SympkQ80X82 1284 aa17.8■□□□□ 0.44
Nup54-201ENSMUST00000038514 Plcd1Q8R3B1 756 aa17.8■□□□□ 0.44
Nup54-201ENSMUST00000038514 Bmp2kQ91Z96 1138 aa17.79■□□□□ 0.44
Nup54-201ENSMUST00000038514 Topaz1E5FYH1 1653 aa17.79■□□□□ 0.44
Nup54-201ENSMUST00000038514 Mst1rQ62190 1378 aa17.79■□□□□ 0.44
Nup54-201ENSMUST00000038514 CebpzP53569 1052 aaKnown RBP17.79■□□□□ 0.44
Nup54-201ENSMUST00000038514 Me3Q8BMF3 604 aa17.79■□□□□ 0.44
Nup54-201ENSMUST00000038514 Dnajc10Q9DC23 793 aa17.79■□□□□ 0.44
Nup54-201ENSMUST00000038514 Shank2Q80Z38 1476 aa17.78■□□□□ 0.44
Nup54-201ENSMUST00000038514 CgnP59242 1191 aa17.78■□□□□ 0.44
Nup54-201ENSMUST00000038514 Rnf20Q5DTM8 973 aa17.78■□□□□ 0.44
Nup54-201ENSMUST00000038514 4930504O13RikQ8C5Z9 145 aa17.78■□□□□ 0.44
Nup54-201ENSMUST00000038514 Nop14Q8R3N1 860 aaKnown RBP17.78■□□□□ 0.44
Nup54-201ENSMUST00000038514 MecomP14404 1042 aa17.77■□□□□ 0.44
Nup54-201ENSMUST00000038514 Gm973E9Q295 1059 aa17.77■□□□□ 0.44
Nup54-201ENSMUST00000038514 Gimap6Q8K349 305 aa17.77■□□□□ 0.44
Nup54-201ENSMUST00000038514 Lmbr1lQ9D1E5 489 aa17.77■□□□□ 0.44
Nup54-201ENSMUST00000038514 TnmdQ9EP64 317 aa17.77■□□□□ 0.44
Nup54-201ENSMUST00000038514 Taf7Q9R1C0 341 aa17.77■□□□□ 0.44
Nup54-201ENSMUST00000038514 Ctdnep1Q3TP92 244 aa17.76■□□□□ 0.43
Nup54-201ENSMUST00000038514 Larp1Q6ZQ58 1072 aaKnown RBP17.76■□□□□ 0.43
Nup54-201ENSMUST00000038514 Rhot2Q8JZN7 620 aa17.76■□□□□ 0.43
Nup54-201ENSMUST00000038514 StrbpQ91WM1 672 aaKnown RBP17.76■□□□□ 0.43
Nup54-201ENSMUST00000038514 Kcnh5Q920E3 988 aa17.76■□□□□ 0.43
Nup54-201ENSMUST00000038514 Hmg20bQ9Z104 317 aa17.76■□□□□ 0.43
Nup54-201ENSMUST00000038514 Nlrp9bQ66X22 1003 aa17.76■□□□□ 0.43
Nup54-201ENSMUST00000038514 Kank4Q6P9J5 1016 aa17.76■□□□□ 0.43
Nup54-201ENSMUST00000038514 Ppm1mQ8BU27 406 aa17.76■□□□□ 0.43
Nup54-201ENSMUST00000038514 Srgap1Q91Z69 1062 aa17.75■□□□□ 0.43
Nup54-201ENSMUST00000038514 Pdia6Q922R8 440 aaKnown RBP17.75■□□□□ 0.43
Nup54-201ENSMUST00000038514 Krt85Q9Z2T6 507 aa17.75■□□□□ 0.43
Nup54-201ENSMUST00000038514 Lnx1O70263 728 aa17.75■□□□□ 0.43
Nup54-201ENSMUST00000038514 Igfbp6P47880 238 aa17.75■□□□□ 0.43
Nup54-201ENSMUST00000038514 ZwintQ9CQU5 252 aa17.75■□□□□ 0.43
Nup54-201ENSMUST00000038514 Hmgn5Q9JL35 406 aa17.75■□□□□ 0.43
Nup54-201ENSMUST00000038514 TimelessQ9R1X4 1197 aa17.75■□□□□ 0.43
Nup54-201ENSMUST00000038514 Ubn2Q80WC1 1314 aa17.74■□□□□ 0.43
Nup54-201ENSMUST00000038514 Mctp1E9PV86 951 aa17.74■□□□□ 0.43
Nup54-201ENSMUST00000038514 Oas2E9Q9A9 742 aa17.74■□□□□ 0.43
Nup54-201ENSMUST00000038514 Ubash3aQ3V3E1 624 aa17.74■□□□□ 0.43
Nup54-201ENSMUST00000038514 Polr3gQ6NXY9 223 aa17.74■□□□□ 0.43
Nup54-201ENSMUST00000038514 Tbc1d4Q8BYJ6 1307 aa17.74■□□□□ 0.43
Nup54-201ENSMUST00000038514 Fmnl2A2APV2 1086 aa17.74■□□□□ 0.43
Nup54-201ENSMUST00000038514 Zfp251Q6PCX8 632 aa17.74■□□□□ 0.43
Nup54-201ENSMUST00000038514 Ccdc155Q80VJ8 648 aa17.74■□□□□ 0.43
Nup54-201ENSMUST00000038514 Stat1P42225 749 aa17.73■□□□□ 0.43
Nup54-201ENSMUST00000038514 Nxf2Q4ZGD8 691 aa17.73■□□□□ 0.43
Nup54-201ENSMUST00000038514 Simc1E9Q6E9 1354 aa17.73■□□□□ 0.43
Nup54-201ENSMUST00000038514 Tpd52l1O54818 204 aa17.73■□□□□ 0.43
Nup54-201ENSMUST00000038514 Cdk4P30285 303 aa17.73■□□□□ 0.43
Nup54-201ENSMUST00000038514 Ppp1r10Q80W00 888 aaKnown RBP17.73■□□□□ 0.43
Nup54-201ENSMUST00000038514 Tubb6Q922F4 447 aa17.73■□□□□ 0.43
Nup54-201ENSMUST00000038514 Ric1Q69ZJ7 1422 aa17.72■□□□□ 0.43
Nup54-201ENSMUST00000038514 1700113H08RikE9Q9Q5 327 aa17.72■□□□□ 0.43
Nup54-201ENSMUST00000038514 Trim30aP15533 496 aa17.72■□□□□ 0.43
Nup54-201ENSMUST00000038514 Nrbp1Q99J45 535 aa17.72■□□□□ 0.43
Nup54-201ENSMUST00000038514 Slit1Q80TR4 1531 aa17.72■□□□□ 0.43
Nup54-201ENSMUST00000038514 InsrrQ9WTL4 1300 aa17.72■□□□□ 0.43
Nup54-201ENSMUST00000038514 Fbxl16A2RT62 479 aa17.72■□□□□ 0.43
Nup54-201ENSMUST00000038514 TnrQ8BYI9 1358 aa17.71■□□□□ 0.43
Nup54-201ENSMUST00000038514 RdxP26043 583 aaKnown RBP17.71■□□□□ 0.43
Nup54-201ENSMUST00000038514 Cdkn1cP49919 348 aa17.71■□□□□ 0.43
Nup54-201ENSMUST00000038514 DbnlQ62418 436 aa17.71■□□□□ 0.43
Nup54-201ENSMUST00000038514 CtifQ6PEE2 600 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms