RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 TMEM45AQ9NWC5 275 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 RIMS3Q9UJD0 308 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 EIF3LQ9Y262 564 aaKnown RBP12.55□□□□□ -0.4
HLA-C-210ENST00000640219 MRPS33Q9Y291 106 aaKnown RBP12.55□□□□□ -0.4
HLA-C-210ENST00000640219 ASB4Q9Y574 426 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 PCDHGB3Q9Y5G1 929 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 MBD3L4A6NDZ8 208 aaPredicted RBP12.54□□□□□ -0.4
HLA-C-210ENST00000640219 MBD3L5A6NJ08 208 aaPredicted RBP12.54□□□□□ -0.4
HLA-C-210ENST00000640219 C17orf105B2RV13 164 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 WWP2O00308 870 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 MANBAO00462 879 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 ZFAND5O76080 213 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 EPPINO95925 133 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 OTCP00480 354 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 IL2RAP01589 272 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 FAM58BPP0C7Q3 252 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 TNNI3P19429 210 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 TCN1P20061 433 aaPredicted RBP12.54□□□□□ -0.4
HLA-C-210ENST00000640219 GPX3P22352 226 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 PTX3P26022 381 aaPredicted RBP12.54□□□□□ -0.4
HLA-C-210ENST00000640219 SERPINB1P30740 379 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 SOX3P41225 446 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 ZNF136P52737 540 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 WNT3P56703 355 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 PHEXP78562 749 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 HMGCS1Q01581 520 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 ROR2Q01974 943 aaKnown RBP12.54□□□□□ -0.4
HLA-C-210ENST00000640219 FOXO1Q12778 655 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 GGTA1PQ4G0N0 100 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 CLEC6AQ6EIG7 209 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 CYP20A1Q6UW02 462 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 UGT2A3Q6UWM9 527 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 GPRIN3Q6ZVF9 776 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 NUDT13Q86X67 352 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 SRFBP1Q8NEF9 429 aaKnown RBP12.54□□□□□ -0.4
HLA-C-210ENST00000640219 TUBGCP3Q96CW5 907 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 VMP1Q96GC9 406 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 ROGDIQ9GZN7 287 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 RPF2Q9H7B2 306 aaKnown RBP12.54□□□□□ -0.4
HLA-C-210ENST00000640219 C8orf4Q9NR00 106 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 TUBA8Q9NY65 449 aaPredicted RBP12.54□□□□□ -0.4
HLA-C-210ENST00000640219 TMEM181Q9P2C4 612 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 ADGRE2Q9UHX3 823 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 TSC22D4Q9Y3Q8 395 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 PTGDR2Q9Y5Y4 395 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 AP4B1Q9Y6B7 739 aa12.54□□□□□ -0.4
HLA-C-210ENST00000640219 SONP18583 2426 aaKnown RBP12.54□□□□□ -0.4
HLA-C-210ENST00000640219 NCKAP5O14513 1909 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 C15orf38-AP3S2A0A0A6YYH1 394 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 AQP12BA6NM10 295 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 EEF1E1-BLOC1S5C9J1V9 151 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 FOXE1O00358 373 aaPredicted RBP12.53□□□□□ -0.4
HLA-C-210ENST00000640219 NR5A2O00482 541 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 FBP2O00757 339 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 CASKO14936 926 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 EEF1E1O43324 174 aaKnown RBP12.53□□□□□ -0.4
HLA-C-210ENST00000640219 WIPF1O43516 503 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 NR2F6P10588 404 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 UROSP10746 265 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 MSX2P35548 267 aaPredicted RBP12.53□□□□□ -0.4
HLA-C-210ENST00000640219 TIMP3P35625 211 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 RPL5P46777 297 aaKnown RBP12.53□□□□□ -0.4
HLA-C-210ENST00000640219 DNASE1L1P49184 302 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 DUSP2Q05923 314 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 KRTAP1-1Q07627 177 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 ELAVL1Q15717 326 aaKnown RBP12.53□□□□□ -0.4
HLA-C-210ENST00000640219 UGT3A2Q3SY77 523 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 METTL2BQ6P1Q9 378 aaKnown RBP12.53□□□□□ -0.4
HLA-C-210ENST00000640219 RTL4Q6ZR62 310 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 COMMD6Q7Z4G1 85 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 ARPINQ7Z6K5 226 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 AQP12AQ8IXF9 295 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 ZCCHC7Q8N3Z6 543 aaKnown RBP12.53□□□□□ -0.4
HLA-C-210ENST00000640219 GALNT4Q8N4A0 578 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 C1orf52Q8N6N3 182 aaKnown RBP12.53□□□□□ -0.4
HLA-C-210ENST00000640219 SLC2A12Q8TD20 617 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 ZNF382Q96SR6 550 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 CCL19Q99731 98 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 OSBPL11Q9BXB4 747 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 EBPLQ9BY08 206 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 ACPTQ9BZG2 426 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 DDX31Q9H8H2 851 aaKnown RBP12.53□□□□□ -0.4
HLA-C-210ENST00000640219 CD300AQ9UGN4 299 aa12.53□□□□□ -0.4
HLA-C-210ENST00000640219 TCRBV3S1A0A5B6 114 aa12.52□□□□□ -0.41
HLA-C-210ENST00000640219 SH3D21A4FU49 640 aa12.52□□□□□ -0.41
HLA-C-210ENST00000640219 AHRRA9YTQ3 701 aa12.52□□□□□ -0.41
HLA-C-210ENST00000640219 KDM4EB2RXH2 506 aaPredicted RBP12.52□□□□□ -0.41
HLA-C-210ENST00000640219 PIP5K1BO14986 540 aa12.52□□□□□ -0.41
HLA-C-210ENST00000640219 DNAJA2O60884 412 aa12.52□□□□□ -0.41
HLA-C-210ENST00000640219 CT62P0C5K7 136 aa12.52□□□□□ -0.41
HLA-C-210ENST00000640219 PABPC4LP0CB38 370 aaKnown RBP12.52□□□□□ -0.41
HLA-C-210ENST00000640219 FPR1P21462 350 aa12.52□□□□□ -0.41
HLA-C-210ENST00000640219 HMOX2P30519 316 aa12.52□□□□□ -0.41
HLA-C-210ENST00000640219 MRPL19P49406 292 aaKnown RBP12.52□□□□□ -0.41
HLA-C-210ENST00000640219 AGFG1P52594 562 aaKnown RBP12.52□□□□□ -0.41
HLA-C-210ENST00000640219 ACSF3Q4G176 576 aaPredicted RBP12.52□□□□□ -0.41
HLA-C-210ENST00000640219 IL23RQ5VWK5 629 aa12.52□□□□□ -0.41
HLA-C-210ENST00000640219 HEPHL1Q6MZM0 1159 aa12.52□□□□□ -0.41
HLA-C-210ENST00000640219 LACC1Q8IV20 430 aa12.52□□□□□ -0.41
HLA-C-210ENST00000640219 METTL4Q8N3J2 472 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms