RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 NEIL2Q969S2 332 aa2.87□□□□□ -1.95
CCDC7-216ENST00000640058 TMEM45BQ96B21 275 aa2.87□□□□□ -1.95
CCDC7-216ENST00000640058 MRPL38Q96DV4 380 aaKnown RBP2.87□□□□□ -1.95
CCDC7-216ENST00000640058 FTHL17Q9BXU8 183 aa2.87□□□□□ -1.95
CCDC7-216ENST00000640058 XPO4Q9C0E2 1151 aaKnown RBP2.87□□□□□ -1.95
CCDC7-216ENST00000640058 DDX47Q9H0S4 455 aaKnown RBP2.87□□□□□ -1.95
CCDC7-216ENST00000640058 SIRPDQ9H106 197 aa2.87□□□□□ -1.95
CCDC7-216ENST00000640058 HSD3B7Q9H2F3 369 aa2.87□□□□□ -1.95
CCDC7-216ENST00000640058 PNO1Q9NRX1 252 aaKnown RBP2.87□□□□□ -1.95
CCDC7-216ENST00000640058 NINJ2Q9NZG7 142 aa2.87□□□□□ -1.95
CCDC7-216ENST00000640058 MBD2Q9UBB5 411 aa2.87□□□□□ -1.95
CCDC7-216ENST00000640058 PIN4Q9Y237 131 aaKnown RBP2.87□□□□□ -1.95
CCDC7-216ENST00000640058 A0A0U1RRA0 63 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 BICDL2A1A5D9 508 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 TMEM89A2RUT3 159 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 USP27XA6NNY8 438 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 E9PLD3 99 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 HSF2BPO75031 334 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 LYPLA1O75608 230 aaPredicted RBP2.86□□□□□ -1.95
CCDC7-216ENST00000640058 ANP32DO95626 131 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 SEMG1P04279 462 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 MARCKSP29966 332 aaPredicted RBP2.86□□□□□ -1.95
CCDC7-216ENST00000640058 GPC3P51654 580 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 IL1RL1Q01638 556 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 DAZ2Q13117 558 aaKnown RBP2.86□□□□□ -1.95
CCDC7-216ENST00000640058 CYP51A1Q16850 503 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 ZSWIM7Q19AV6 140 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 OR5M10Q6IEU7 315 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 HACD2Q6Y1H2 254 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 GPBP1Q86WP2 473 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 KDM8Q8N371 416 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 ALLCQ8N6M5 410 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 ZBTB44Q8NCP5 570 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 DAZ3Q9NR90 486 aaKnown RBP2.86□□□□□ -1.95
CCDC7-216ENST00000640058 FAM153AQ9UHL3 310 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 L3MBTL1Q9Y468 752 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 ZMYM6O95789 1325 aa2.86□□□□□ -1.95
CCDC7-216ENST00000640058 A0A1B0GUA9 196 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 CFAP73A6NFT4 308 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 ARHGAP42A6NI28 874 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 PRPSAP2O60256 369 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 SUPT7LO94864 414 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 GAP43P17677 238 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 VDAC1P21796 283 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 ATXN3P54252 364 aaPredicted RBP2.85□□□□□ -1.95
CCDC7-216ENST00000640058 BPIFB3P59826 476 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 TIMM10P62072 90 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 WASHC5Q12768 1159 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 KCNJ11Q14654 390 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 TOR1AIP1Q5JTV8 583 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 BEND6Q5SZJ8 279 aaPredicted RBP2.85□□□□□ -1.95
CCDC7-216ENST00000640058 SLX4IPQ5VYV7 408 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 FAM159AQ6UWV7 190 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 OLFM4Q6UX06 510 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 TAF8Q7Z7C8 310 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 YRDCQ86U90 279 aaKnown RBP2.85□□□□□ -1.95
CCDC7-216ENST00000640058 ZNF589Q86UQ0 364 aaPredicted RBP2.85□□□□□ -1.95
CCDC7-216ENST00000640058 AMZ2Q86W34 360 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 ARIH2OSQ8N7S6 290 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 CCDC71LQ8N9Z2 235 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 CCNYQ8ND76 341 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 CNNM3Q8NE01 707 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 ZNF397Q8NF99 534 aaPredicted RBP2.85□□□□□ -1.95
CCDC7-216ENST00000640058 ARNTL2Q8WYA1 636 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 HAVCR1Q96D42 359 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 C14orf79Q96F83 325 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 VPS39Q96JC1 886 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 SAMD8Q96LT4 415 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 SMIM14Q96QK8 99 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 COQ7Q99807 217 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 CTRCQ99895 268 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 CBWD1Q9BRT8 395 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 MARCH5Q9NX47 278 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 ONECUT1Q9UBC0 465 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 SPASTQ9UBP0 616 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 ZNF223Q9UK11 482 aaPredicted RBP2.85□□□□□ -1.95
CCDC7-216ENST00000640058 FZR1Q9UM11 496 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 DUSP12Q9UNI6 340 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 PRG3Q9Y2Y8 225 aaPredicted RBP2.85□□□□□ -1.95
CCDC7-216ENST00000640058 PPIAL4AQ9Y536 164 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 UBE4BO95155 1302 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 ANKRD30BQ9BXX2 1392 aa2.85□□□□□ -1.95
CCDC7-216ENST00000640058 ADAM12O43184 909 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 BUB1O43683 1085 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 STK17BO94768 372 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 TOXO94900 526 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 OR8U8P0C7N1 319 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 AKT2P31751 481 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 RABIFP47224 123 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 SLC6A8P48029 635 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 OTUD4Q01804 1114 aaKnown RBP2.84□□□□□ -1.95
CCDC7-216ENST00000640058 OC90Q02509 493 aaPredicted RBP2.84□□□□□ -1.95
CCDC7-216ENST00000640058 EGFEM1PQ0D2K5 195 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 ZNF691Q5VV52 312 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 LIPKQ5VXJ0 399 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 CYB5R2Q6BCY4 276 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 WDR88Q6ZMY6 472 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 ZSCAN30Q86W11 494 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 MINDY2Q8NBR6 621 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 LEMD2Q8NC56 503 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms